RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 CYP19A1P11511 503 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC12-220ENST00000482645 CRKLP46109 303 aaKnown RBP25.75■■□□□ 1.71
TRAPPC12-220ENST00000482645 EXOSC9Q06265 439 aaKnown RBP25.75■■□□□ 1.71
TRAPPC12-220ENST00000482645 NECTIN2Q92692 538 aa25.75■■□□□ 1.71
TRAPPC12-220ENST00000482645 LAMB4A4D0S4 1761 aa25.75■■□□□ 1.71
TRAPPC12-220ENST00000482645 ZNF827Q17R98 1081 aa25.74■■□□□ 1.71
TRAPPC12-220ENST00000482645 TSPYL6Q8N831 410 aa25.74■■□□□ 1.71
TRAPPC12-220ENST00000482645 NBPF14Q5TI25 921 aa25.73■■□□□ 1.71
TRAPPC12-220ENST00000482645 STK32BQ9NY57 414 aa25.73■■□□□ 1.71
TRAPPC12-220ENST00000482645 GNPATO15228 680 aa25.73■■□□□ 1.71
TRAPPC12-220ENST00000482645 PIP4K2AP48426 406 aaPredicted RBP25.73■■□□□ 1.71
TRAPPC12-220ENST00000482645 MYH14Q7Z406 1995 aaKnown RBP25.72■■□□□ 1.71
TRAPPC12-220ENST00000482645 HMGB2P26583 209 aaKnown RBP25.72■■□□□ 1.71
TRAPPC12-220ENST00000482645 TWISTNBQ3B726 338 aaPredicted RBP25.72■■□□□ 1.71
TRAPPC12-220ENST00000482645 CCDC87Q9NVE4 849 aa25.72■■□□□ 1.71
TRAPPC12-220ENST00000482645 TFCP2L1Q9NZI6 479 aa25.72■■□□□ 1.71
TRAPPC12-220ENST00000482645 CNTNAP4Q9C0A0 1308 aa25.71■■□□□ 1.71
TRAPPC12-220ENST00000482645 A1BGP04217 495 aa25.71■■□□□ 1.71
TRAPPC12-220ENST00000482645 CANXP27824 592 aaKnown RBP25.71■■□□□ 1.71
TRAPPC12-220ENST00000482645 ZBTB1Q9Y2K1 713 aa25.71■■□□□ 1.71
TRAPPC12-220ENST00000482645 ZNF330Q9Y3S2 320 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC12-220ENST00000482645 PHF14O94880 888 aa25.7■■□□□ 1.7
TRAPPC12-220ENST00000482645 HDGFL1Q5TGJ6 251 aa25.7■■□□□ 1.7
TRAPPC12-220ENST00000482645 INTS5Q6P9B9 1019 aaKnown RBP25.7■■□□□ 1.7
TRAPPC12-220ENST00000482645 SMIM5Q71RC9 77 aa25.7■■□□□ 1.7
TRAPPC12-220ENST00000482645 AKT1S1Q96B36 256 aa25.7■■□□□ 1.7
TRAPPC12-220ENST00000482645 SLC15A2Q16348 729 aa25.69■■□□□ 1.7
TRAPPC12-220ENST00000482645 TRMT2AQ8IZ69 625 aaKnown RBP25.69■■□□□ 1.7
TRAPPC12-220ENST00000482645 HOXB7P09629 217 aa25.68■■□□□ 1.7
TRAPPC12-220ENST00000482645 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
TRAPPC12-220ENST00000482645 AMIGO3Q86WK7 504 aa25.67■■□□□ 1.7
TRAPPC12-220ENST00000482645 RTCBQ9Y3I0 505 aaKnown RBP25.67■■□□□ 1.7
TRAPPC12-220ENST00000482645 TUBGCP6Q96RT7 1819 aa25.66■■□□□ 1.7
TRAPPC12-220ENST00000482645 MYL6BP14649 208 aa25.66■■□□□ 1.7
TRAPPC12-220ENST00000482645 UBR3Q6ZT12 1888 aa25.65■■□□□ 1.7
TRAPPC12-220ENST00000482645 TCERG1O14776 1098 aaKnown RBP25.65■■□□□ 1.7
TRAPPC12-220ENST00000482645 R3HDM1Q15032 1099 aaKnown RBP25.65■■□□□ 1.7
TRAPPC12-220ENST00000482645 PSDA5PKW4 1024 aaPredicted RBP25.64■■□□□ 1.7
TRAPPC12-220ENST00000482645 ANXA1P04083 346 aa25.64■■□□□ 1.7
TRAPPC12-220ENST00000482645 CHPF2Q9P2E5 772 aa25.64■■□□□ 1.7
TRAPPC12-220ENST00000482645 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 NBPF26B4DH59 902 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 MSH5O43196 834 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 VAMP4O75379 141 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 RPS6KA4O75676 772 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 NBPF10Q6P3W6 841 aaKnown RBP25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 NBPF15Q8N660 670 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 ARXQ96QS3 562 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 SOS1Q07889 1333 aaPredicted RBP25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 CCDC30Q5VVM6 783 aa25.63■■□□□ 1.69
TRAPPC12-220ENST00000482645 PROSER3Q2NL68 480 aa25.62■■□□□ 1.69
TRAPPC12-220ENST00000482645 PNPLA7Q6ZV29 1317 aa25.61■■□□□ 1.69
TRAPPC12-220ENST00000482645 COL15A1P39059 1388 aa25.61■■□□□ 1.69
TRAPPC12-220ENST00000482645 SSFA2P28290 1259 aa25.6■■□□□ 1.69
TRAPPC12-220ENST00000482645 IL6STP40189 918 aaPredicted RBP25.6■■□□□ 1.69
TRAPPC12-220ENST00000482645 TRAPPC3LQ5T215 181 aa25.6■■□□□ 1.69
TRAPPC12-220ENST00000482645 ERBB4Q15303 1308 aa25.6■■□□□ 1.69
TRAPPC12-220ENST00000482645 PDIA6Q15084 440 aa25.59■■□□□ 1.69
TRAPPC12-220ENST00000482645 STK31Q9BXU1 1019 aa25.59■■□□□ 1.69
TRAPPC12-220ENST00000482645 CHMP4AQ9BY43 222 aa25.59■■□□□ 1.69
TRAPPC12-220ENST00000482645 DBF4Q9UBU7 674 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC12-220ENST00000482645 EIF5P55010 431 aaKnown RBP25.58■■□□□ 1.69
TRAPPC12-220ENST00000482645 DDX21Q9NR30 783 aaKnown RBP eCLIP25.58■■□□□ 1.69
TRAPPC12-220ENST00000482645 COL23A1Q86Y22 540 aaPredicted RBP25.58■■□□□ 1.68
TRAPPC12-220ENST00000482645 ARHGEF1Q92888 912 aaKnown RBP25.58■■□□□ 1.68
TRAPPC12-220ENST00000482645 PDGFDQ9GZP0 370 aaPredicted RBP25.58■■□□□ 1.68
TRAPPC12-220ENST00000482645 RFC4P35249 363 aa25.57■■□□□ 1.68
TRAPPC12-220ENST00000482645 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
TRAPPC12-220ENST00000482645 QSER1Q2KHR3 1735 aa25.56■■□□□ 1.68
TRAPPC12-220ENST00000482645 ADRA2BP18089 450 aa25.56■■□□□ 1.68
TRAPPC12-220ENST00000482645 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
TRAPPC12-220ENST00000482645 TBC1D2BQ9UPU7 963 aa25.56■■□□□ 1.68
TRAPPC12-220ENST00000482645 C4AP0C0L4 1744 aa25.55■■□□□ 1.68
TRAPPC12-220ENST00000482645 BCL2L13Q9BXK5 485 aa25.55■■□□□ 1.68
TRAPPC12-220ENST00000482645 SLC4A2P04920 1241 aa25.54■■□□□ 1.68
TRAPPC12-220ENST00000482645 HYPKQ9NX55 129 aa25.54■■□□□ 1.68
TRAPPC12-220ENST00000482645 A0A087WZG4 1122 aa25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 DZIP3Q86Y13 1208 aaKnown RBP25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 SRP68Q9UHB9 627 aaKnown RBP25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 ZPR1O75312 459 aa25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 CT47B1P0C2W7 299 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 XAGE3Q8WTP9 111 aa25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 PHAXQ9H814 394 aaKnown RBP25.53■■□□□ 1.68
TRAPPC12-220ENST00000482645 TTLL7Q6ZT98 887 aa25.52■■□□□ 1.68
TRAPPC12-220ENST00000482645 COPS6Q7L5N1 327 aa25.52■■□□□ 1.68
TRAPPC12-220ENST00000482645 LRP10Q7Z4F1 713 aa25.52■■□□□ 1.68
TRAPPC12-220ENST00000482645 KIF6Q6ZMV9 814 aa25.51■■□□□ 1.67
TRAPPC12-220ENST00000482645 SSH1Q8WYL5 1049 aa25.51■■□□□ 1.67
TRAPPC12-220ENST00000482645 USPL1Q5W0Q7 1092 aa25.5■■□□□ 1.67
TRAPPC12-220ENST00000482645 SMC4Q9NTJ3 1288 aa25.5■■□□□ 1.67
TRAPPC12-220ENST00000482645 USP42Q9H9J4 1324 aaKnown RBP25.5■■□□□ 1.67
TRAPPC12-220ENST00000482645 ZNF428Q96B54 188 aa25.49■■□□□ 1.67
TRAPPC12-220ENST00000482645 ZBTB3Q9H5J0 574 aa25.49■■□□□ 1.67
TRAPPC12-220ENST00000482645 NARFQ9UHQ1 456 aa25.49■■□□□ 1.67
TRAPPC12-220ENST00000482645 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
TRAPPC12-220ENST00000482645 MSL1Q68DK7 614 aa25.48■■□□□ 1.67
TRAPPC12-220ENST00000482645 G2E3Q7L622 706 aa25.48■■□□□ 1.67
TRAPPC12-220ENST00000482645 CASZ1Q86V15 1759 aa25.48■■□□□ 1.67
TRAPPC12-220ENST00000482645 RCAN3Q9UKA8 241 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms