RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TNS1Q9HBL0 1735 aaKnown RBP14.93□□□□□ -0.02
HPS4-212ENST00000481910 PRAMEF22A3QJZ6 481 aa14.92□□□□□ -0.02
HPS4-212ENST00000481910 TAF7LQ5H9L4 462 aa14.92□□□□□ -0.02
HPS4-212ENST00000481910 SLC4A9Q96Q91 983 aa14.92□□□□□ -0.02
HPS4-212ENST00000481910 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
HPS4-212ENST00000481910 KCNQ4P56696 695 aa14.92□□□□□ -0.02
HPS4-212ENST00000481910 BAG6P46379 1132 aa14.91□□□□□ -0.02
HPS4-212ENST00000481910 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
HPS4-212ENST00000481910 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
HPS4-212ENST00000481910 LY75O60449 1722 aa14.91□□□□□ -0.02
HPS4-212ENST00000481910 VAMP4O75379 141 aa14.9□□□□□ -0.02
HPS4-212ENST00000481910 EIF2S2P20042 333 aaKnown RBP14.9□□□□□ -0.02
HPS4-212ENST00000481910 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
HPS4-212ENST00000481910 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
HPS4-212ENST00000481910 DNAJC10Q8IXB1 793 aa14.9□□□□□ -0.02
HPS4-212ENST00000481910 HOXB7P09629 217 aa14.9□□□□□ -0.02
HPS4-212ENST00000481910 PROM2Q8N271 834 aa14.9□□□□□ -0.02
HPS4-212ENST00000481910 UPF1Q92900 1129 aaKnown RBP eCLIP14.9□□□□□ -0.02
HPS4-212ENST00000481910 SOS1Q07889 1333 aaPredicted RBP14.89□□□□□ -0.03
HPS4-212ENST00000481910 ITPK1Q13572 414 aa14.89□□□□□ -0.03
HPS4-212ENST00000481910 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
HPS4-212ENST00000481910 DEFB132Q7Z7B7 95 aa14.89□□□□□ -0.03
HPS4-212ENST00000481910 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
HPS4-212ENST00000481910 STARD3NLO95772 234 aa14.88□□□□□ -0.03
HPS4-212ENST00000481910 CT47B1P0C2W7 299 aaPredicted RBP14.88□□□□□ -0.03
HPS4-212ENST00000481910 CAMKK2Q96RR4 588 aa14.88□□□□□ -0.03
HPS4-212ENST00000481910 LRRC4BQ9NT99 713 aa14.88□□□□□ -0.03
HPS4-212ENST00000481910 C5P01031 1676 aa14.88□□□□□ -0.03
HPS4-212ENST00000481910 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
HPS4-212ENST00000481910 HDGFL1Q5TGJ6 251 aa14.88□□□□□ -0.03
HPS4-212ENST00000481910 CHMP4AQ9BY43 222 aa14.88□□□□□ -0.03
HPS4-212ENST00000481910 CYP19A1P11511 503 aaPredicted RBP14.87□□□□□ -0.03
HPS4-212ENST00000481910 FGD1P98174 961 aa14.87□□□□□ -0.03
HPS4-212ENST00000481910 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
HPS4-212ENST00000481910 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
HPS4-212ENST00000481910 TJP1Q07157 1748 aa14.86□□□□□ -0.03
HPS4-212ENST00000481910 TCERG1O14776 1098 aaKnown RBP14.86□□□□□ -0.03
HPS4-212ENST00000481910 HMGB2P26583 209 aaKnown RBP14.86□□□□□ -0.03
HPS4-212ENST00000481910 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
HPS4-212ENST00000481910 ZNF428Q96B54 188 aa14.86□□□□□ -0.03
HPS4-212ENST00000481910 RGPD3A6NKT7 1758 aaPredicted RBP14.85□□□□□ -0.03
HPS4-212ENST00000481910 RGPD4Q7Z3J3 1758 aa14.85□□□□□ -0.03
HPS4-212ENST00000481910 A1BGP04217 495 aa14.85□□□□□ -0.03
HPS4-212ENST00000481910 CRKLP46109 303 aaKnown RBP14.85□□□□□ -0.03
HPS4-212ENST00000481910 TAF1LQ8IZX4 1826 aa14.84□□□□□ -0.03
HPS4-212ENST00000481910 LAMB4A4D0S4 1761 aa14.84□□□□□ -0.03
HPS4-212ENST00000481910 STK31Q9BXU1 1019 aa14.84□□□□□ -0.03
HPS4-212ENST00000481910 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
HPS4-212ENST00000481910 PIP4K2AP48426 406 aaPredicted RBP14.84□□□□□ -0.03
HPS4-212ENST00000481910 CCDC87Q9NVE4 849 aa14.84□□□□□ -0.03
HPS4-212ENST00000481910 CHPF2Q9P2E5 772 aa14.84□□□□□ -0.03
HPS4-212ENST00000481910 DBF4Q9UBU7 674 aaPredicted RBP14.84□□□□□ -0.03
HPS4-212ENST00000481910 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
HPS4-212ENST00000481910 CANXP27824 592 aaKnown RBP14.83□□□□□ -0.04
HPS4-212ENST00000481910 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
HPS4-212ENST00000481910 BCL2L13Q9BXK5 485 aa14.83□□□□□ -0.04
HPS4-212ENST00000481910 RCAN3Q9UKA8 241 aa14.83□□□□□ -0.04
HPS4-212ENST00000481910 COL5A3P25940 1745 aaPredicted RBP14.83□□□□□ -0.04
HPS4-212ENST00000481910 MYL6BP14649 208 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 INTS5Q6P9B9 1019 aaKnown RBP14.82□□□□□ -0.04
HPS4-212ENST00000481910 SSH1Q8WYL5 1049 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 DDX21Q9NR30 783 aaKnown RBP eCLIP14.82□□□□□ -0.04
HPS4-212ENST00000481910 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 MYH14Q7Z406 1995 aaKnown RBP14.82□□□□□ -0.04
HPS4-212ENST00000481910 ERBB4Q15303 1308 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 CNTNAP4Q9C0A0 1308 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 NBPF26B4DH59 902 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 ANXA1P04083 346 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 PDIA6Q15084 440 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 RC3H1Q5TC82 1133 aaKnown RBP14.82□□□□□ -0.04
HPS4-212ENST00000481910 NBPF14Q5TI25 921 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 NBPF10Q6P3W6 841 aaKnown RBP14.82□□□□□ -0.04
HPS4-212ENST00000481910 NBPF15Q8N660 670 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 SMC4Q9NTJ3 1288 aa14.82□□□□□ -0.04
HPS4-212ENST00000481910 ZNF330Q9Y3S2 320 aaPredicted RBP14.82□□□□□ -0.04
HPS4-212ENST00000481910 PROSER3Q2NL68 480 aa14.81□□□□□ -0.04
HPS4-212ENST00000481910 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
HPS4-212ENST00000481910 AK7Q96M32 723 aa14.81□□□□□ -0.04
HPS4-212ENST00000481910 C4BP0C0L5 1744 aa14.8□□□□□ -0.04
HPS4-212ENST00000481910 GNPATO15228 680 aa14.8□□□□□ -0.04
HPS4-212ENST00000481910 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
HPS4-212ENST00000481910 CACNA1FO60840 1977 aa14.8□□□□□ -0.04
HPS4-212ENST00000481910 BCAR3O75815 825 aa14.8□□□□□ -0.04
HPS4-212ENST00000481910 IL6STP40189 918 aaPredicted RBP14.79□□□□□ -0.04
HPS4-212ENST00000481910 GLIPR1L2Q4G1C9 344 aa14.79□□□□□ -0.04
HPS4-212ENST00000481910 MRPL50Q8N5N7 158 aaKnown RBP14.79□□□□□ -0.04
HPS4-212ENST00000481910 PHAXQ9H814 394 aaKnown RBP14.79□□□□□ -0.04
HPS4-212ENST00000481910 RTCBQ9Y3I0 505 aaKnown RBP14.79□□□□□ -0.04
HPS4-212ENST00000481910 RPS6KA4O75676 772 aa14.78□□□□□ -0.04
HPS4-212ENST00000481910 TFCP2L1Q9NZI6 479 aa14.78□□□□□ -0.04
HPS4-212ENST00000481910 RREB1Q92766 1687 aa14.78□□□□□ -0.04
HPS4-212ENST00000481910 AIMP1Q12904 312 aaKnown RBP14.78□□□□□ -0.04
HPS4-212ENST00000481910 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
HPS4-212ENST00000481910 EIF5P55010 431 aaKnown RBP14.77□□□□□ -0.04
HPS4-212ENST00000481910 ZNF827Q17R98 1081 aa14.77□□□□□ -0.04
HPS4-212ENST00000481910 SMIM5Q71RC9 77 aa14.77□□□□□ -0.04
HPS4-212ENST00000481910 COPS6Q7L5N1 327 aa14.77□□□□□ -0.04
HPS4-212ENST00000481910 G2E3Q7L622 706 aa14.77□□□□□ -0.04
HPS4-212ENST00000481910 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms