RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 A1BGP04217 495 aa15.12■□□□□ 0.01
RAPGEF1-207ENST00000481260 MAPK8IP3Q9UPT6 1336 aa15.12■□□□□ 0.01
RAPGEF1-207ENST00000481260 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 RFC4P35249 363 aa15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 DDR1Q08345 913 aa15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 VSIG10Q8N0Z9 540 aa15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 BCL2L12Q9HB09 334 aa15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 USP16Q9Y5T5 823 aa15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
RAPGEF1-207ENST00000481260 ADRA2BP18089 450 aa15.1■□□□□ 0.01
RAPGEF1-207ENST00000481260 RIPK4P57078 832 aa15.1■□□□□ 0.01
RAPGEF1-207ENST00000481260 USPL1Q5W0Q7 1092 aa15.1■□□□□ 0.01
RAPGEF1-207ENST00000481260 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
RAPGEF1-207ENST00000481260 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF1-207ENST00000481260 TRIM35Q9UPQ4 493 aa15.09■□□□□ 0.01
RAPGEF1-207ENST00000481260 COL15A1P39059 1388 aa15.09■□□□□ 0.01
RAPGEF1-207ENST00000481260 YBX3P16989 372 aaKnown RBP eCLIP15.08■□□□□ 0
RAPGEF1-207ENST00000481260 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
RAPGEF1-207ENST00000481260 WDR43Q15061 677 aaKnown RBP eCLIP15.08■□□□□ 0
RAPGEF1-207ENST00000481260 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
RAPGEF1-207ENST00000481260 NBPF26B4DH59 902 aa15.07■□□□□ 0
RAPGEF1-207ENST00000481260 HMGB2P26583 209 aaKnown RBP15.07■□□□□ 0
RAPGEF1-207ENST00000481260 NBPF10Q6P3W6 841 aaKnown RBP15.07■□□□□ 0
RAPGEF1-207ENST00000481260 NBPF15Q8N660 670 aa15.07■□□□□ 0
RAPGEF1-207ENST00000481260 ZNF330Q9Y3S2 320 aaPredicted RBP15.07■□□□□ 0
RAPGEF1-207ENST00000481260 STARD3NLO95772 234 aa15.06■□□□□ 0
RAPGEF1-207ENST00000481260 NEFMP07197 916 aa15.06■□□□□ 0
RAPGEF1-207ENST00000481260 RUNDC1Q96C34 613 aa15.06■□□□□ 0
RAPGEF1-207ENST00000481260 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
RAPGEF1-207ENST00000481260 KDM3BQ7LBC6 1761 aa15.06■□□□□ 0
RAPGEF1-207ENST00000481260 EIF4A1P60842 406 aaKnown RBP15.05■□□□□ -0
RAPGEF1-207ENST00000481260 KRT24Q2M2I5 525 aa15.05■□□□□ -0
RAPGEF1-207ENST00000481260 NLGN1Q8N2Q7 840 aa15.05■□□□□ -0
RAPGEF1-207ENST00000481260 NARFQ9UHQ1 456 aa15.05■□□□□ -0
RAPGEF1-207ENST00000481260 CD2APQ9Y5K6 639 aa15.05■□□□□ -0
RAPGEF1-207ENST00000481260 POLRMTO00411 1230 aaKnown RBP15.04■□□□□ -0
RAPGEF1-207ENST00000481260 APAF1O14727 1248 aa15.04■□□□□ -0
RAPGEF1-207ENST00000481260 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
RAPGEF1-207ENST00000481260 TM4SF1P30408 202 aa15.04■□□□□ -0
RAPGEF1-207ENST00000481260 NFIXQ14938 502 aa15.04■□□□□ -0
RAPGEF1-207ENST00000481260 PNNQ9H307 717 aaKnown RBP15.04■□□□□ -0
RAPGEF1-207ENST00000481260 KIAA1551Q9HCM1 1747 aa15.03■□□□□ -0
RAPGEF1-207ENST00000481260 PXDNLA1KZ92 1463 aa15.03■□□□□ -0
RAPGEF1-207ENST00000481260 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
RAPGEF1-207ENST00000481260 ZPR1O75312 459 aa15.03■□□□□ -0
RAPGEF1-207ENST00000481260 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
RAPGEF1-207ENST00000481260 GPR162Q16538 588 aa15.03■□□□□ -0
RAPGEF1-207ENST00000481260 BICDL1Q6ZP65 573 aa15.03■□□□□ -0
RAPGEF1-207ENST00000481260 A0A0G2JLW4 131 aa15.02■□□□□ -0
RAPGEF1-207ENST00000481260 TBC1D9BQ66K14 1250 aa15.02■□□□□ -0
RAPGEF1-207ENST00000481260 CCDC24Q8N4L8 307 aa15.02■□□□□ -0
RAPGEF1-207ENST00000481260 TEX13AQ9BXU3 409 aaPredicted RBP15.02■□□□□ -0
RAPGEF1-207ENST00000481260 TSPYL4Q9UJ04 414 aa15.02■□□□□ -0
RAPGEF1-207ENST00000481260 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
RAPGEF1-207ENST00000481260 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
RAPGEF1-207ENST00000481260 CAMTA2O94983 1202 aa15.01□□□□□ -0.01
RAPGEF1-207ENST00000481260 DPEP1P16444 411 aa15.01□□□□□ -0.01
RAPGEF1-207ENST00000481260 YY1P25490 414 aa15.01□□□□□ -0.01
RAPGEF1-207ENST00000481260 IL6STP40189 918 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF1-207ENST00000481260 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
RAPGEF1-207ENST00000481260 ANP32CO43423 234 aa15□□□□□ -0.01
RAPGEF1-207ENST00000481260 NGEFQ8N5V2 710 aa15□□□□□ -0.01
RAPGEF1-207ENST00000481260 MRS2Q9HD23 443 aa15□□□□□ -0.01
RAPGEF1-207ENST00000481260 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
RAPGEF1-207ENST00000481260 N4BP2Q86UW6 1770 aaPredicted RBP15□□□□□ -0.01
RAPGEF1-207ENST00000481260 ANXA1P04083 346 aa14.99□□□□□ -0.01
RAPGEF1-207ENST00000481260 KCNA3P22001 575 aa14.99□□□□□ -0.01
RAPGEF1-207ENST00000481260 CHRNA5P30532 468 aa14.99□□□□□ -0.01
RAPGEF1-207ENST00000481260 PROSER3Q2NL68 480 aa14.99□□□□□ -0.01
RAPGEF1-207ENST00000481260 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
RAPGEF1-207ENST00000481260 SCN7AQ01118 1682 aa14.99□□□□□ -0.01
RAPGEF1-207ENST00000481260 CHL1O00533 1208 aa14.98□□□□□ -0.01
RAPGEF1-207ENST00000481260 TTLL7Q6ZT98 887 aa14.98□□□□□ -0.01
RAPGEF1-207ENST00000481260 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
RAPGEF1-207ENST00000481260 KIF13BQ9NQT8 1826 aa14.98□□□□□ -0.01
RAPGEF1-207ENST00000481260 SERPINB2P05120 415 aa14.97□□□□□ -0.01
RAPGEF1-207ENST00000481260 MYL6BP14649 208 aa14.97□□□□□ -0.01
RAPGEF1-207ENST00000481260 HLFQ16534 295 aa14.97□□□□□ -0.01
RAPGEF1-207ENST00000481260 LAMB4A4D0S4 1761 aa14.97□□□□□ -0.01
RAPGEF1-207ENST00000481260 AFDNP55196 1824 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 A0A087WZG4 1122 aa14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 EIF2S2P20042 333 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 PDIA6Q15084 440 aa14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 LRP10Q7Z4F1 713 aa14.96□□□□□ -0.01
RAPGEF1-207ENST00000481260 MBIPQ9NS73 344 aa14.95□□□□□ -0.02
RAPGEF1-207ENST00000481260 BCORQ6W2J9 1755 aa14.95□□□□□ -0.02
RAPGEF1-207ENST00000481260 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
RAPGEF1-207ENST00000481260 ZNF853P0CG23 659 aa14.94□□□□□ -0.02
RAPGEF1-207ENST00000481260 TGFB2P61812 414 aa14.93□□□□□ -0.02
RAPGEF1-207ENST00000481260 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
RAPGEF1-207ENST00000481260 BCS1LQ9Y276 419 aa14.93□□□□□ -0.02
RAPGEF1-207ENST00000481260 SALL2Q9Y467 1007 aaPredicted RBP14.93□□□□□ -0.02
RAPGEF1-207ENST00000481260 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
RAPGEF1-207ENST00000481260 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
RAPGEF1-207ENST00000481260 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
RAPGEF1-207ENST00000481260 CFAP44Q96MT7 982 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 304.3 ms