RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 PLA2G4AP47712 749 aa11.24□□□□□ -0.61
GTF3C3-211ENST00000481098 C1orf216Q8TAB5 229 aa11.24□□□□□ -0.61
GTF3C3-211ENST00000481098 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
GTF3C3-211ENST00000481098 WEE1P30291 646 aa11.23□□□□□ -0.61
GTF3C3-211ENST00000481098 PHKA2P46019 1235 aa11.23□□□□□ -0.61
GTF3C3-211ENST00000481098 LCE2AQ5TA79 106 aaPredicted RBP11.23□□□□□ -0.61
GTF3C3-211ENST00000481098 TMEM164Q5U3C3 297 aa11.23□□□□□ -0.61
GTF3C3-211ENST00000481098 ZDHHC3Q9NYG2 299 aa11.23□□□□□ -0.61
GTF3C3-211ENST00000481098 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
GTF3C3-211ENST00000481098 EML1O00423 815 aa11.22□□□□□ -0.61
GTF3C3-211ENST00000481098 IGFBP4P22692 258 aa11.22□□□□□ -0.61
GTF3C3-211ENST00000481098 NOS2P35228 1153 aa11.22□□□□□ -0.61
GTF3C3-211ENST00000481098 SLC16A10Q8TF71 515 aa11.22□□□□□ -0.61
GTF3C3-211ENST00000481098 ATP4AP20648 1035 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 VEGFBP49765 207 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 TBCELQ5QJ74 424 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 TRIM22Q8IYM9 498 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 L3MBTL2Q969R5 705 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 ARID3AQ99856 593 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
GTF3C3-211ENST00000481098 ATAD2Q6PL18 1390 aa11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 SERTM1A2A2V5 107 aa11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 MSX1P28360 303 aa11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 SCG3Q8WXD2 468 aaKnown RBP11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 CRISPLD1Q9H336 500 aa11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 CUEDC1Q9NWM3 386 aaPredicted RBP11.2□□□□□ -0.62
GTF3C3-211ENST00000481098 WFS1O76024 890 aa11.19□□□□□ -0.62
GTF3C3-211ENST00000481098 IRF7Q92985 503 aa11.19□□□□□ -0.62
GTF3C3-211ENST00000481098 C2orf49Q9BVC5 232 aaPredicted RBP11.19□□□□□ -0.62
GTF3C3-211ENST00000481098 H7C1W4 665 aa11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 OCLNQ16625 522 aa11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 CLP1Q92989 425 aaKnown RBP11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 GAS2L1Q99501 681 aaPredicted RBP11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
GTF3C3-211ENST00000481098 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
GTF3C3-211ENST00000481098 ZNF837Q96EG3 531 aaPredicted RBP11.17□□□□□ -0.62
GTF3C3-211ENST00000481098 GPC6Q9Y625 555 aaPredicted RBP11.17□□□□□ -0.62
GTF3C3-211ENST00000481098 PARP3Q9Y6F1 533 aa11.17□□□□□ -0.62
GTF3C3-211ENST00000481098 TMEM88BA6NKF7 163 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 FOXO3O43524 673 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 TATP17735 454 aaPredicted RBP11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 TXLNAP40222 546 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 DBN1Q16643 649 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 C7orf43Q8WVR3 580 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 GPAMQ9HCL2 828 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
GTF3C3-211ENST00000481098 THBS1P07996 1170 aa11.15□□□□□ -0.62
GTF3C3-211ENST00000481098 SH3PXD2AQ5TCZ1 1133 aa11.15□□□□□ -0.62
GTF3C3-211ENST00000481098 RIPOR1Q6ZS17 1223 aa11.15□□□□□ -0.62
GTF3C3-211ENST00000481098 AIDAQ96BJ3 306 aa11.15□□□□□ -0.62
GTF3C3-211ENST00000481098 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
GTF3C3-211ENST00000481098 SV2AQ7L0J3 742 aa11.14□□□□□ -0.63
GTF3C3-211ENST00000481098 PGBD3Q8N328 593 aa11.14□□□□□ -0.63
GTF3C3-211ENST00000481098 VWA5B2Q8N398 1253 aa11.14□□□□□ -0.63
GTF3C3-211ENST00000481098 NUCKS1Q9H1E3 243 aaKnown RBP11.14□□□□□ -0.63
GTF3C3-211ENST00000481098 USTQ9Y2C2 406 aa11.14□□□□□ -0.63
GTF3C3-211ENST00000481098 LGR5O75473 907 aa11.13□□□□□ -0.63
GTF3C3-211ENST00000481098 UBAP2LQ14157 1087 aaKnown RBP11.13□□□□□ -0.63
GTF3C3-211ENST00000481098 RUBCNLQ9H714 662 aa11.13□□□□□ -0.63
GTF3C3-211ENST00000481098 SLAIN2Q9P270 581 aa11.13□□□□□ -0.63
GTF3C3-211ENST00000481098 EFHC2Q5JST6 749 aa11.12□□□□□ -0.63
GTF3C3-211ENST00000481098 NLRP8Q86W28 1048 aa11.12□□□□□ -0.63
GTF3C3-211ENST00000481098 ZIC5Q96T25 663 aa11.12□□□□□ -0.63
GTF3C3-211ENST00000481098 CDC14CA4D256 554 aa11.11□□□□□ -0.63
GTF3C3-211ENST00000481098 PRMT3O60678 531 aa11.11□□□□□ -0.63
GTF3C3-211ENST00000481098 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
GTF3C3-211ENST00000481098 A0A1W2PNR3 127 aa11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 FKBP5Q13451 457 aaPredicted RBP11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 GPR161Q8N6U8 529 aaKnown RBP11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 CHMP7Q8WUX9 453 aaPredicted RBP11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 COL26A1Q96A83 441 aa11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 PRIMPOLQ96LW4 560 aa11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
GTF3C3-211ENST00000481098 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
GTF3C3-211ENST00000481098 HCN4Q9Y3Q4 1203 aa11.09□□□□□ -0.63
GTF3C3-211ENST00000481098 WIPF1O43516 503 aa11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 RTN1Q16799 776 aa11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 FIGNL1Q6PIW4 674 aa11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 GTPBP3Q969Y2 492 aaKnown RBP11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 NDFIP2Q9NV92 336 aa11.08□□□□□ -0.64
GTF3C3-211ENST00000481098 GMPRP36959 345 aa11.07□□□□□ -0.64
GTF3C3-211ENST00000481098 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
GTF3C3-211ENST00000481098 RHPN1Q8TCX5 695 aa11.06□□□□□ -0.64
GTF3C3-211ENST00000481098 MYO19Q96H55 970 aa11.06□□□□□ -0.64
GTF3C3-211ENST00000481098 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
GTF3C3-211ENST00000481098 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
GTF3C3-211ENST00000481098 GAS6Q14393 721 aa11.05□□□□□ -0.64
GTF3C3-211ENST00000481098 BICDL1Q6ZP65 573 aa11.05□□□□□ -0.64
GTF3C3-211ENST00000481098 RETREG2Q8NC44 543 aa11.05□□□□□ -0.64
GTF3C3-211ENST00000481098 TRERF1Q96PN7 1200 aa11.05□□□□□ -0.64
GTF3C3-211ENST00000481098 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms