RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 FBXO31Q5XUX0 539 aaPredicted RBP10.01□□□□□ -0.81
VPS50-215ENST00000480943 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
VPS50-215ENST00000480943 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
VPS50-215ENST00000480943 CTDSPL2Q05D32 466 aa10□□□□□ -0.81
VPS50-215ENST00000480943 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
VPS50-215ENST00000480943 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 SHISA8B8ZZ34 492 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 ADH1AP07327 375 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 PRICKLE2Q7Z3G6 844 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 PCMTD1Q96MG8 357 aaPredicted RBP9.99□□□□□ -0.81
VPS50-215ENST00000480943 DYRK1BQ9Y463 629 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 CFAP74Q9C0B2 1584 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 FMN1Q68DA7 1419 aa9.99□□□□□ -0.81
VPS50-215ENST00000480943 PCF11O94913 1555 aaKnown RBP9.98□□□□□ -0.81
VPS50-215ENST00000480943 AMPD1P23109 780 aa9.98□□□□□ -0.81
VPS50-215ENST00000480943 PTGIRP43119 386 aa9.98□□□□□ -0.81
VPS50-215ENST00000480943 CHRNA4P43681 627 aa9.98□□□□□ -0.81
VPS50-215ENST00000480943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS50-215ENST00000480943 AP1G2O75843 785 aa9.97□□□□□ -0.81
VPS50-215ENST00000480943 RICTORQ6R327 1708 aa9.96□□□□□ -0.81
VPS50-215ENST00000480943 RHOQP17081 205 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 GATA4P43694 442 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 RNF144AP50876 292 aaPredicted RBP9.96□□□□□ -0.82
VPS50-215ENST00000480943 LINC00114Q6XXX2 140 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 KRTAP4-7Q9BYR0 210 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 SUV39H2Q9H5I1 410 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 ADGRL1O94910 1474 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 ARAP3Q8WWN8 1544 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 FRMPD1Q5SYB0 1578 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 KIF14Q15058 1648 aa9.96□□□□□ -0.82
VPS50-215ENST00000480943 COBLO75128 1261 aa9.95□□□□□ -0.82
VPS50-215ENST00000480943 GOLGA6L1Q8N7Z2 621 aa9.95□□□□□ -0.82
VPS50-215ENST00000480943 NEO1Q92859 1461 aa9.94□□□□□ -0.82
VPS50-215ENST00000480943 RFC5P40937 340 aa9.94□□□□□ -0.82
VPS50-215ENST00000480943 INTS6LQ5JSJ4 861 aaKnown RBP9.94□□□□□ -0.82
VPS50-215ENST00000480943 CFHR5Q9BXR6 569 aa9.94□□□□□ -0.82
VPS50-215ENST00000480943 PLEKHD1A6NEE1 506 aa9.93□□□□□ -0.82
VPS50-215ENST00000480943 PRKCSHP14314 528 aaPredicted RBP9.93□□□□□ -0.82
VPS50-215ENST00000480943 GAS2L1Q99501 681 aaPredicted RBP9.93□□□□□ -0.82
VPS50-215ENST00000480943 PHF24Q9UPV7 400 aa9.93□□□□□ -0.82
VPS50-215ENST00000480943 ARHGAP9Q9BRR9 750 aa9.92□□□□□ -0.82
VPS50-215ENST00000480943 FANCAO15360 1455 aa9.91□□□□□ -0.82
VPS50-215ENST00000480943 CDC42BPBQ9Y5S2 1711 aa9.91□□□□□ -0.82
VPS50-215ENST00000480943 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
VPS50-215ENST00000480943 GPC1P35052 558 aa9.91□□□□□ -0.82
VPS50-215ENST00000480943 FOXD4L6Q3SYB3 417 aaPredicted RBP9.91□□□□□ -0.82
VPS50-215ENST00000480943 FOXD4L3Q6VB84 417 aaPredicted RBP9.91□□□□□ -0.82
VPS50-215ENST00000480943 KLRG1Q96E93 195 aa9.91□□□□□ -0.82
VPS50-215ENST00000480943 NUCKS1Q9H1E3 243 aaKnown RBP9.91□□□□□ -0.82
VPS50-215ENST00000480943 PHLDB1Q86UU1 1377 aa9.9□□□□□ -0.82
VPS50-215ENST00000480943 NR6A1Q15406 480 aa9.9□□□□□ -0.82
VPS50-215ENST00000480943 ARHGEF40Q8TER5 1519 aa9.9□□□□□ -0.82
VPS50-215ENST00000480943 CCDC18Q5T9S5 1454 aa9.9□□□□□ -0.83
VPS50-215ENST00000480943 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.83
VPS50-215ENST00000480943 CLIP1P30622 1438 aa9.9□□□□□ -0.83
VPS50-215ENST00000480943 PREX2Q70Z35 1606 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 RSPO4Q2I0M5 234 aaPredicted RBP9.89□□□□□ -0.83
VPS50-215ENST00000480943 PDXDC2PQ6P474 469 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 ZBTB33Q86T24 672 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 FKBPLQ9UIM3 349 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 FYCO1Q9BQS8 1478 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 AKNAQ7Z591 1439 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 CASKIN1Q8WXD9 1431 aa9.89□□□□□ -0.83
VPS50-215ENST00000480943 BCORL1Q5H9F3 1711 aa9.88□□□□□ -0.83
VPS50-215ENST00000480943 NBPF20Q3BBV1 942 aa9.88□□□□□ -0.83
VPS50-215ENST00000480943 TMEM259Q4ZIN3 620 aa9.88□□□□□ -0.83
VPS50-215ENST00000480943 LCE1DQ5T752 114 aa9.88□□□□□ -0.83
VPS50-215ENST00000480943 C1orf229Q6ZS94 237 aaPredicted RBP9.88□□□□□ -0.83
VPS50-215ENST00000480943 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
VPS50-215ENST00000480943 TROQ12816 1431 aaPredicted RBP9.88□□□□□ -0.83
VPS50-215ENST00000480943 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
VPS50-215ENST00000480943 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
VPS50-215ENST00000480943 RAPGEF3O95398 923 aa9.87□□□□□ -0.83
VPS50-215ENST00000480943 HMX1Q9NP08 348 aaPredicted RBP9.87□□□□□ -0.83
VPS50-215ENST00000480943 SIGLEC1Q9BZZ2 1709 aa9.87□□□□□ -0.83
VPS50-215ENST00000480943 ARHGAP5Q13017 1502 aa9.87□□□□□ -0.83
VPS50-215ENST00000480943 ADAMTSL3P82987 1691 aa9.87□□□□□ -0.83
VPS50-215ENST00000480943 ITSN2Q9NZM3 1697 aa9.87□□□□□ -0.83
VPS50-215ENST00000480943 ZC3H4Q9UPT8 1303 aaKnown RBP9.86□□□□□ -0.83
VPS50-215ENST00000480943 YBX3P16989 372 aaKnown RBP eCLIP9.86□□□□□ -0.83
VPS50-215ENST00000480943 PLCH2O75038 1416 aa9.85□□□□□ -0.83
VPS50-215ENST00000480943 HOXB4P17483 251 aaPredicted RBP9.85□□□□□ -0.83
VPS50-215ENST00000480943 SLCO4C1Q6ZQN7 724 aa9.85□□□□□ -0.83
VPS50-215ENST00000480943 PNMA1Q8ND90 353 aa9.85□□□□□ -0.83
VPS50-215ENST00000480943 EPS8L1Q8TE68 723 aa9.85□□□□□ -0.83
VPS50-215ENST00000480943 TMPRSS4Q9NRS4 437 aa9.85□□□□□ -0.83
VPS50-215ENST00000480943 CDK11AQ9UQ88 783 aaPredicted RBP9.85□□□□□ -0.83
VPS50-215ENST00000480943 ZFYVE16Q7Z3T8 1539 aa9.85□□□□□ -0.83
VPS50-215ENST00000480943 RIMS1Q86UR5 1692 aaKnown RBP9.84□□□□□ -0.83
VPS50-215ENST00000480943 LRP8Q14114 963 aa9.84□□□□□ -0.83
VPS50-215ENST00000480943 NKAPLQ5M9Q1 402 aa9.84□□□□□ -0.83
VPS50-215ENST00000480943 MADDQ8WXG6 1647 aa9.84□□□□□ -0.83
VPS50-215ENST00000480943 FER1L4A9Z1Z3 1794 aa9.83□□□□□ -0.84
VPS50-215ENST00000480943 TXKP42681 527 aa9.83□□□□□ -0.84
VPS50-215ENST00000480943 KDF1Q8NAX2 398 aaPredicted RBP9.83□□□□□ -0.84
VPS50-215ENST00000480943 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
VPS50-215ENST00000480943 POGZQ7Z3K3 1410 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms