RNA–Protein interactions for RNA: ENST00000480785.5

HLA-DMA-209, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-209ENST00000480785 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
HLA-DMA-209ENST00000480785 CCDC87Q9NVE4 849 aa17.64■□□□□ 0.41
HLA-DMA-209ENST00000480785 ANP32CO43423 234 aa17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 C1QTNF8P60827 252 aa17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 TRAPPC3LQ5T215 181 aa17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 PELP1Q8IZL8 1130 aaKnown RBP17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 TEX13AQ9BXU3 409 aaPredicted RBP17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 KIF13BQ9NQT8 1826 aa17.63■□□□□ 0.41
HLA-DMA-209ENST00000480785 RIPK4P57078 832 aa17.62■□□□□ 0.41
HLA-DMA-209ENST00000480785 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
HLA-DMA-209ENST00000480785 SOS1Q07889 1333 aaPredicted RBP17.62■□□□□ 0.41
HLA-DMA-209ENST00000480785 LMOD3Q0VAK6 560 aa17.61■□□□□ 0.41
HLA-DMA-209ENST00000480785 CCDC146Q8IYE0 955 aa17.61■□□□□ 0.41
HLA-DMA-209ENST00000480785 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
HLA-DMA-209ENST00000480785 STARD3NLO95772 234 aa17.59■□□□□ 0.41
HLA-DMA-209ENST00000480785 THUMPD2Q9BTF0 503 aaKnown RBP17.59■□□□□ 0.41
HLA-DMA-209ENST00000480785 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
HLA-DMA-209ENST00000480785 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 GYS1P13807 737 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 RFC4P35249 363 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 CD2APQ9Y5K6 639 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 BCORQ6W2J9 1755 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 SCN7AQ01118 1682 aa17.58■□□□□ 0.4
HLA-DMA-209ENST00000480785 COL15A1P39059 1388 aa17.57■□□□□ 0.4
HLA-DMA-209ENST00000480785 USP42Q9H9J4 1324 aaKnown RBP17.57■□□□□ 0.4
HLA-DMA-209ENST00000480785 GRIN3BO60391 1043 aa17.57■□□□□ 0.4
HLA-DMA-209ENST00000480785 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
HLA-DMA-209ENST00000480785 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
HLA-DMA-209ENST00000480785 NLGN1Q8N2Q7 840 aa17.56■□□□□ 0.4
HLA-DMA-209ENST00000480785 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
HLA-DMA-209ENST00000480785 CEP350Q5VT06 3117 aa17.56■□□□□ 0.4
HLA-DMA-209ENST00000480785 KIAA1551Q9HCM1 1747 aa17.55■□□□□ 0.4
HLA-DMA-209ENST00000480785 GIGYF1O75420 1035 aaPredicted RBP17.55■□□□□ 0.4
HLA-DMA-209ENST00000480785 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
HLA-DMA-209ENST00000480785 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
HLA-DMA-209ENST00000480785 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
HLA-DMA-209ENST00000480785 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
HLA-DMA-209ENST00000480785 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
HLA-DMA-209ENST00000480785 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
HLA-DMA-209ENST00000480785 MRS2Q9HD23 443 aa17.54■□□□□ 0.4
HLA-DMA-209ENST00000480785 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
HLA-DMA-209ENST00000480785 APAF1O14727 1248 aa17.53■□□□□ 0.4
HLA-DMA-209ENST00000480785 A1BGP04217 495 aa17.53■□□□□ 0.4
HLA-DMA-209ENST00000480785 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
HLA-DMA-209ENST00000480785 SRP68Q9UHB9 627 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-209ENST00000480785 ATP10DQ9P241 1426 aa17.53■□□□□ 0.4
HLA-DMA-209ENST00000480785 ADCY9O60503 1353 aa17.53■□□□□ 0.4
HLA-DMA-209ENST00000480785 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-209ENST00000480785 MMP10P09238 476 aa17.52■□□□□ 0.4
HLA-DMA-209ENST00000480785 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-209ENST00000480785 NUP98P52948 1817 aa17.51■□□□□ 0.39
HLA-DMA-209ENST00000480785 A0A087WZG4 1122 aa17.51■□□□□ 0.39
HLA-DMA-209ENST00000480785 CHL1O00533 1208 aa17.51■□□□□ 0.39
HLA-DMA-209ENST00000480785 FKBP8Q14318 412 aa17.51■□□□□ 0.39
HLA-DMA-209ENST00000480785 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
HLA-DMA-209ENST00000480785 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
HLA-DMA-209ENST00000480785 ZPR1O75312 459 aa17.5■□□□□ 0.39
HLA-DMA-209ENST00000480785 TM4SF1P30408 202 aa17.5■□□□□ 0.39
HLA-DMA-209ENST00000480785 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
HLA-DMA-209ENST00000480785 USPL1Q5W0Q7 1092 aa17.5■□□□□ 0.39
HLA-DMA-209ENST00000480785 BCL2L12Q9HB09 334 aa17.5■□□□□ 0.39
HLA-DMA-209ENST00000480785 C10orf71Q711Q0 1435 aa17.49■□□□□ 0.39
HLA-DMA-209ENST00000480785 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
HLA-DMA-209ENST00000480785 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
HLA-DMA-209ENST00000480785 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
HLA-DMA-209ENST00000480785 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
HLA-DMA-209ENST00000480785 DDR1Q08345 913 aa17.47■□□□□ 0.39
HLA-DMA-209ENST00000480785 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
HLA-DMA-209ENST00000480785 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
HLA-DMA-209ENST00000480785 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
HLA-DMA-209ENST00000480785 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
HLA-DMA-209ENST00000480785 RGL2O15211 777 aa17.46■□□□□ 0.39
HLA-DMA-209ENST00000480785 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
HLA-DMA-209ENST00000480785 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.38
HLA-DMA-209ENST00000480785 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
HLA-DMA-209ENST00000480785 NFIXQ14938 502 aa17.45■□□□□ 0.38
HLA-DMA-209ENST00000480785 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
HLA-DMA-209ENST00000480785 DLEC1Q9Y238 1755 aa17.45■□□□□ 0.38
HLA-DMA-209ENST00000480785 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 CALD1Q05682 793 aaKnown RBP17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
HLA-DMA-209ENST00000480785 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
HLA-DMA-209ENST00000480785 HOXB7P09629 217 aa17.42■□□□□ 0.38
HLA-DMA-209ENST00000480785 GNAI1P63096 354 aa17.42■□□□□ 0.38
HLA-DMA-209ENST00000480785 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
HLA-DMA-209ENST00000480785 MBIPQ9NS73 344 aa17.42■□□□□ 0.38
HLA-DMA-209ENST00000480785 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
HLA-DMA-209ENST00000480785 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
HLA-DMA-209ENST00000480785 TGFB2P61812 414 aa17.41■□□□□ 0.38
HLA-DMA-209ENST00000480785 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
HLA-DMA-209ENST00000480785 GPBP1L1Q9HC44 474 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms