RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 MAPK8IP3Q9UPT6 1336 aa12.09□□□□□ -0.47
SRGAP3-206ENST00000480750 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 USP42Q9H9J4 1324 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-206ENST00000480750 COL15A1P39059 1388 aa12.07□□□□□ -0.48
SRGAP3-206ENST00000480750 HEG1Q9ULI3 1381 aa12.07□□□□□ -0.48
SRGAP3-206ENST00000480750 PRAMEF22A3QJZ6 481 aa12.07□□□□□ -0.48
SRGAP3-206ENST00000480750 THUMPD2Q9BTF0 503 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-206ENST00000480750 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
SRGAP3-206ENST00000480750 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-206ENST00000480750 CEMIPQ8WUJ3 1361 aa12.06□□□□□ -0.48
SRGAP3-206ENST00000480750 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRGAP3-206ENST00000480750 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
SRGAP3-206ENST00000480750 USPL1Q5W0Q7 1092 aa12.06□□□□□ -0.48
SRGAP3-206ENST00000480750 HTATSF1O43719 755 aaKnown RBP12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 FKBP8Q14318 412 aa12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 MYBBP1AQ9BQG0 1328 aaKnown RBP12.05□□□□□ -0.48
SRGAP3-206ENST00000480750 A0A087WZG4 1122 aa12.04□□□□□ -0.48
SRGAP3-206ENST00000480750 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
SRGAP3-206ENST00000480750 A1BGP04217 495 aa12.04□□□□□ -0.48
SRGAP3-206ENST00000480750 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
SRGAP3-206ENST00000480750 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
SRGAP3-206ENST00000480750 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
SRGAP3-206ENST00000480750 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 KDM3BQ7LBC6 1761 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 ARFGEF1Q9Y6D6 1849 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 TGFB2P61812 414 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 TAF7Q15545 349 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 NFE2L2Q16236 605 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
SRGAP3-206ENST00000480750 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.48
SRGAP3-206ENST00000480750 A0A0G2JLW4 131 aa12.02□□□□□ -0.49
SRGAP3-206ENST00000480750 DDR1Q08345 913 aa12.02□□□□□ -0.49
SRGAP3-206ENST00000480750 WDR43Q15061 677 aaKnown RBP eCLIP12.02□□□□□ -0.49
SRGAP3-206ENST00000480750 BCS1LQ9Y276 419 aa12.02□□□□□ -0.49
SRGAP3-206ENST00000480750 BCORQ6W2J9 1755 aa12.02□□□□□ -0.49
SRGAP3-206ENST00000480750 SNRPA1P09661 255 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 PNISRQ8TF01 805 aaKnown RBP12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
SRGAP3-206ENST00000480750 CACNA1SQ13698 1873 aa12□□□□□ -0.49
SRGAP3-206ENST00000480750 POLRMTO00411 1230 aaKnown RBP12□□□□□ -0.49
SRGAP3-206ENST00000480750 NPHP1O15259 732 aa12□□□□□ -0.49
SRGAP3-206ENST00000480750 DPEP1P16444 411 aa12□□□□□ -0.49
SRGAP3-206ENST00000480750 CCDC184Q52MB2 194 aa12□□□□□ -0.49
SRGAP3-206ENST00000480750 CCDC24Q8N4L8 307 aa12□□□□□ -0.49
SRGAP3-206ENST00000480750 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
SRGAP3-206ENST00000480750 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
SRGAP3-206ENST00000480750 TM4SF1P30408 202 aa11.99□□□□□ -0.49
SRGAP3-206ENST00000480750 RIPK4P57078 832 aa11.99□□□□□ -0.49
SRGAP3-206ENST00000480750 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
SRGAP3-206ENST00000480750 NFIXQ14938 502 aa11.99□□□□□ -0.49
SRGAP3-206ENST00000480750 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
SRGAP3-206ENST00000480750 DLEC1Q9Y238 1755 aa11.99□□□□□ -0.49
SRGAP3-206ENST00000480750 SERPINB2P05120 415 aa11.98□□□□□ -0.49
SRGAP3-206ENST00000480750 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
SRGAP3-206ENST00000480750 NGEFQ8N5V2 710 aa11.98□□□□□ -0.49
SRGAP3-206ENST00000480750 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
SRGAP3-206ENST00000480750 CCDC88AQ3V6T2 1871 aa11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 CHRNA5P30532 468 aa11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 ARHGAP27Q6ZUM4 889 aa11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 ANKRD31Q8N7Z5 1873 aa11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 NUP98P52948 1817 aa11.97□□□□□ -0.49
SRGAP3-206ENST00000480750 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 TMPOP42166 694 aaKnown RBP11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 SETDB2Q96T68 719 aa11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 TSPYL4Q9UJ04 414 aa11.96□□□□□ -0.49
SRGAP3-206ENST00000480750 SBF1O95248 1867 aa11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 ZNF526Q8TF50 670 aaPredicted RBP11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
SRGAP3-206ENST00000480750 H0YIN7 160 aa11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 CAMTA2O94983 1202 aa11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 KCNA3P22001 575 aa11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 ST5P78524 1137 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms