RNA–Protein interactions for RNA: ENST00000480283.5

ATRX-206, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 10,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-206ENST00000480283 USP16Q9Y5T5 823 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 USP19O94966 1318 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 PNMA6EA0A0J9YXQ4 647 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 K7ELQ4 463 aaPredicted RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 REC8O95072 547 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 ATP2B1P20020 1258 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 PRPF40BQ6NWY9 871 aaKnown RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 RHPN1Q8TCX5 695 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 C19orf44Q9H6X5 657 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 IQSEC3Q9UPP2 1182 aaPredicted RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 ERVK-7P63135 1459 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 LMO7Q8WWI1 1683 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 TRPM1Q7Z4N2 1603 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 PIBF1Q8WXW3 757 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 DBF4Q9UBU7 674 aaPredicted RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 TTC21AQ8NDW8 1320 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 NBPF7P0C2Y1 421 aaPredicted RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 MX1P20591 662 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 RIPPLY1Q0D2K3 151 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 SF3A1Q15459 793 aaKnown RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 CEP170BQ9Y4F5 1589 aaPredicted RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 ZKSCAN1P17029 563 aaPredicted RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 KCNQ4P56696 695 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 FMNL2Q96PY5 1086 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 MROH2AA6NES4 1674 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 ITSN1Q15811 1721 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 PIK3C2GO75747 1445 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 ARHGAP31Q2M1Z3 1444 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 CCDC57Q2TAC2 916 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 AMOTQ4VCS5 1084 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 TTC37Q6PGP7 1564 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 DDX11Q96FC9 970 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 PREX2Q70Z35 1606 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 NUCB1Q02818 461 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 L1TD1Q5T7N2 865 aaKnown RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 SMIM5Q71RC9 77 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 TRMT112Q9UI30 125 aaKnown RBP4.41□□□□□ -1.7
ATRX-206ENST00000480283 DIP2AQ14689 1571 aa4.41□□□□□ -1.7
ATRX-206ENST00000480283 IFIT1P09914 478 aaKnown RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 FERMT3Q86UX7 667 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 TRMT2AQ8IZ69 625 aaKnown RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 ANKRD44Q8N8A2 993 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 KIF1BPQ96EK5 621 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 RBM27Q9P2N5 1060 aaKnown RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 ABCC11Q96J66 1382 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 TIMM10P62072 90 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 ATP8B2P98198 1209 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 CHAF1AQ13111 956 aaPredicted RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 CAVIN1Q6NZI2 390 aaKnown RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 NECAB1Q8N987 351 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 NGLY1Q96IV0 654 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 PHF23Q9BUL5 403 aaPredicted RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 TUBB4BP68371 445 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 CCDC158Q5M9N0 1113 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 ANKRD13DQ6ZTN6 518 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 CADPS2Q86UW7 1296 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 VPS37DQ86XT2 251 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 NSD2O96028 1365 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 IDH1O75874 414 aaKnown RBP4.4□□□□□ -1.7
ATRX-206ENST00000480283 QRICH2Q9H0J4 1663 aa4.4□□□□□ -1.7
ATRX-206ENST00000480283 NFXL1Q6ZNB6 911 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 LRRC2Q9BYS8 371 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 CHL1O00533 1208 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 EIF4A1P60842 406 aaKnown RBP4.4□□□□□ -1.71
ATRX-206ENST00000480283 CCDC82Q8N4S0 544 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 ZNF594Q96JF6 807 aaPredicted RBP4.4□□□□□ -1.71
ATRX-206ENST00000480283 IL16Q14005 1332 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 RNF123Q5XPI4 1314 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 KDM2BQ8NHM5 1336 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 LARP1Q6PKG0 1096 aaKnown RBP4.4□□□□□ -1.71
ATRX-206ENST00000480283 DDX46Q7L014 1031 aaKnown RBP4.4□□□□□ -1.71
ATRX-206ENST00000480283 UBE3BQ7Z3V4 1068 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 CEP126Q9P2H0 1117 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 ABCF2Q9UG63 623 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 AXIN2Q9Y2T1 843 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 METTL24Q5JXM2 366 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 SUCLG2Q96I99 432 aa4.4□□□□□ -1.71
ATRX-206ENST00000480283 ZNF335Q9H4Z2 1342 aaPredicted RBP4.39□□□□□ -1.71
ATRX-206ENST00000480283 TET3O43151 1660 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 GTF2F1P35269 517 aaKnown RBP eCLIP4.39□□□□□ -1.716e-9■■■■■ 35.5
ATRX-206ENST00000480283 HAND2P61296 217 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 TTC22Q5TAA0 569 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 LDHAL6AQ6ZMR3 332 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 C8orf37Q96NL8 207 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 SNRPA1P09661 255 aaKnown RBP4.39□□□□□ -1.71
ATRX-206ENST00000480283 PDE1AP54750 535 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 PROSER3Q2NL68 480 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 PPP1R1BQ9UD71 204 aaPredicted RBP4.39□□□□□ -1.71
ATRX-206ENST00000480283 GOLIM4O00461 696 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 CHST3Q7LGC8 479 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 BICD2Q8TD16 824 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 DNAJC10Q8IXB1 793 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 USP54Q70EL1 1684 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 KIF24Q5T7B8 1368 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 FIBPO43427 364 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 PDRG1Q9NUG6 133 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 PTPRCP08575 1304 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 FLT4P35916 1363 aa4.39□□□□□ -1.71
ATRX-206ENST00000480283 MSNP26038 577 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms