RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
EFEMP1-211ENST00000480016 CARD10Q9BWT7 1032 aa11.89□□□□□ -0.51
EFEMP1-211ENST00000480016 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
EFEMP1-211ENST00000480016 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
EFEMP1-211ENST00000480016 GCP02774 474 aa11.88□□□□□ -0.51
EFEMP1-211ENST00000480016 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
EFEMP1-211ENST00000480016 SPTBN5Q9NRC6 3674 aaKnown RBP11.88□□□□□ -0.51
EFEMP1-211ENST00000480016 EIF3AQ14152 1382 aaKnown RBP11.88□□□□□ -0.51
EFEMP1-211ENST00000480016 MINK1Q8N4C8 1332 aaPredicted RBP11.87□□□□□ -0.51
EFEMP1-211ENST00000480016 MMP10P09238 476 aa11.87□□□□□ -0.51
EFEMP1-211ENST00000480016 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
EFEMP1-211ENST00000480016 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
EFEMP1-211ENST00000480016 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
EFEMP1-211ENST00000480016 RANBP2P49792 3224 aaKnown RBP11.86□□□□□ -0.51
EFEMP1-211ENST00000480016 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
EFEMP1-211ENST00000480016 CTU1Q7Z7A3 348 aaKnown RBP11.84□□□□□ -0.51
EFEMP1-211ENST00000480016 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.84□□□□□ -0.51
EFEMP1-211ENST00000480016 ABCC6O95255 1503 aa11.83□□□□□ -0.52
EFEMP1-211ENST00000480016 CIAPIN1Q6FI81 312 aa11.83□□□□□ -0.52
EFEMP1-211ENST00000480016 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
EFEMP1-211ENST00000480016 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
EFEMP1-211ENST00000480016 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
EFEMP1-211ENST00000480016 TAF1DQ9H5J8 278 aaPredicted RBP11.82□□□□□ -0.52
EFEMP1-211ENST00000480016 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
EFEMP1-211ENST00000480016 TTC28Q96AY4 2481 aa11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 CCDC88AQ3V6T2 1871 aa11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 TIAM2Q8IVF5 1701 aa11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 ADGRB1O14514 1584 aa11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 WASLO00401 505 aaPredicted RBP11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 DDNO94850 711 aaPredicted RBP11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 SYNGAP1Q96PV0 1343 aa11.81□□□□□ -0.52
EFEMP1-211ENST00000480016 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
EFEMP1-211ENST00000480016 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
EFEMP1-211ENST00000480016 NSD2O96028 1365 aa11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 PPIP5K1Q6PFW1 1433 aa11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 H0YGN5 161 aa11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 PHF14O94880 888 aa11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 MAP1SQ66K74 1059 aaPredicted RBP11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 STXBP5LQ9Y2K9 1186 aa11.79□□□□□ -0.52
EFEMP1-211ENST00000480016 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
EFEMP1-211ENST00000480016 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
EFEMP1-211ENST00000480016 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
EFEMP1-211ENST00000480016 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
EFEMP1-211ENST00000480016 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
EFEMP1-211ENST00000480016 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
EFEMP1-211ENST00000480016 BRCA2P51587 3418 aa11.77□□□□□ -0.52
EFEMP1-211ENST00000480016 PPEF1O14829 653 aaPredicted RBP11.77□□□□□ -0.53
EFEMP1-211ENST00000480016 CST9Q5W186 159 aa11.77□□□□□ -0.53
EFEMP1-211ENST00000480016 ZIC5Q96T25 663 aa11.77□□□□□ -0.53
EFEMP1-211ENST00000480016 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
EFEMP1-211ENST00000480016 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
EFEMP1-211ENST00000480016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
EFEMP1-211ENST00000480016 C5P01031 1676 aa11.76□□□□□ -0.53
EFEMP1-211ENST00000480016 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
EFEMP1-211ENST00000480016 EAPPQ56P03 285 aaPredicted RBP11.76□□□□□ -0.53
EFEMP1-211ENST00000480016 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
EFEMP1-211ENST00000480016 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
EFEMP1-211ENST00000480016 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
EFEMP1-211ENST00000480016 IQCA1LA6NCM1 817 aa11.75□□□□□ -0.53
EFEMP1-211ENST00000480016 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
EFEMP1-211ENST00000480016 PKN2Q16513 984 aaKnown RBP11.75□□□□□ -0.53
EFEMP1-211ENST00000480016 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
EFEMP1-211ENST00000480016 NFKBIEO00221 500 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 CSB-PGBD3P0DP91 1061 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 CHRNA5P30532 468 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 NLRP13Q86W25 1043 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 SLAIN1Q8ND83 568 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 LRCH3Q96II8 777 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 SLIT3O75094 1523 aa11.74□□□□□ -0.53
EFEMP1-211ENST00000480016 CACNA1GO43497 2377 aa11.73□□□□□ -0.53
EFEMP1-211ENST00000480016 UBR3Q6ZT12 1888 aa11.73□□□□□ -0.53
EFEMP1-211ENST00000480016 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
EFEMP1-211ENST00000480016 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
EFEMP1-211ENST00000480016 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
EFEMP1-211ENST00000480016 AK7Q96M32 723 aa11.73□□□□□ -0.53
EFEMP1-211ENST00000480016 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
EFEMP1-211ENST00000480016 SSFA2P28290 1259 aa11.72□□□□□ -0.53
EFEMP1-211ENST00000480016 PRO3102Q9H379 93 aa11.72□□□□□ -0.53
EFEMP1-211ENST00000480016 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
EFEMP1-211ENST00000480016 MAP3K12Q12852 859 aa11.71□□□□□ -0.53
EFEMP1-211ENST00000480016 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
EFEMP1-211ENST00000480016 SAGE1Q9NXZ1 904 aa11.71□□□□□ -0.53
EFEMP1-211ENST00000480016 SCN4AP35499 1836 aa11.71□□□□□ -0.54
EFEMP1-211ENST00000480016 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 IL2RBP14784 551 aa11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 AKAP4Q5JQC9 854 aa11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 SAPCD2Q86UD0 394 aa11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 DDX54Q8TDD1 881 aaKnown RBP11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 COL26A1Q96A83 441 aa11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
EFEMP1-211ENST00000480016 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms