RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 ZNF787Q6DD87 383 aa10.29□□□□□ -0.76
CCDC58-204ENST00000479414 CABP1Q9NZU7 370 aa10.29□□□□□ -0.76
CCDC58-204ENST00000479414 EML1O00423 815 aa10.28□□□□□ -0.76
CCDC58-204ENST00000479414 HIRAP54198 1017 aaPredicted RBP10.28□□□□□ -0.76
CCDC58-204ENST00000479414 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
CCDC58-204ENST00000479414 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 CARNS1A5YM72 827 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 FOXO3O43524 673 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 PRMT3O60678 531 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 NOS2P35228 1153 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 PHKA2P46019 1235 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 PLA2G4AP47712 749 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 C2orf49Q9BVC5 232 aaPredicted RBP10.27□□□□□ -0.77
CCDC58-204ENST00000479414 TIMMDC1Q9NPL8 285 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 CXXC1Q9P0U4 656 aaPredicted RBP10.27□□□□□ -0.77
CCDC58-204ENST00000479414 DYRK1BQ9Y463 629 aa10.27□□□□□ -0.77
CCDC58-204ENST00000479414 ATP2B4P23634 1241 aa10.26□□□□□ -0.77
CCDC58-204ENST00000479414 HOMEZQ8IX15 550 aa10.26□□□□□ -0.77
CCDC58-204ENST00000479414 L3MBTL2Q969R5 705 aa10.26□□□□□ -0.77
CCDC58-204ENST00000479414 CHMP3Q9Y3E7 222 aa10.26□□□□□ -0.77
CCDC58-204ENST00000479414 A0A1B0GTH6 734 aa10.25□□□□□ -0.77
CCDC58-204ENST00000479414 ZDHHC3Q9NYG2 299 aa10.25□□□□□ -0.77
CCDC58-204ENST00000479414 SSFA2P28290 1259 aa10.24□□□□□ -0.77
CCDC58-204ENST00000479414 C1orf216Q8TAB5 229 aa10.24□□□□□ -0.77
CCDC58-204ENST00000479414 ZNF232Q9UNY5 417 aa10.24□□□□□ -0.77
CCDC58-204ENST00000479414 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
CCDC58-204ENST00000479414 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
CCDC58-204ENST00000479414 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
CCDC58-204ENST00000479414 SH3PXD2AQ5TCZ1 1133 aa10.23□□□□□ -0.77
CCDC58-204ENST00000479414 CCDC155Q8N6L0 562 aa10.23□□□□□ -0.77
CCDC58-204ENST00000479414 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
CCDC58-204ENST00000479414 MSX1P28360 303 aa10.22□□□□□ -0.77
CCDC58-204ENST00000479414 B4GALNT3Q6L9W6 998 aa10.22□□□□□ -0.77
CCDC58-204ENST00000479414 COL26A1Q96A83 441 aa10.22□□□□□ -0.77
CCDC58-204ENST00000479414 TRAIPQ9BWF2 469 aa10.22□□□□□ -0.77
CCDC58-204ENST00000479414 F11P03951 625 aa10.21□□□□□ -0.77
CCDC58-204ENST00000479414 ATP4AP20648 1035 aa10.21□□□□□ -0.77
CCDC58-204ENST00000479414 TXLNAP40222 546 aa10.21□□□□□ -0.77
CCDC58-204ENST00000479414 C1orf53Q5VUE5 145 aa10.21□□□□□ -0.77
CCDC58-204ENST00000479414 PHLDB3Q6NSJ2 640 aa10.21□□□□□ -0.77
CCDC58-204ENST00000479414 AIDAQ96BJ3 306 aa10.21□□□□□ -0.77
CCDC58-204ENST00000479414 PPFIA3O75145 1194 aa10.19□□□□□ -0.78
CCDC58-204ENST00000479414 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
CCDC58-204ENST00000479414 NPAS3Q8IXF0 933 aa10.19□□□□□ -0.78
CCDC58-204ENST00000479414 C7orf43Q8WVR3 580 aa10.19□□□□□ -0.78
CCDC58-204ENST00000479414 VTI1AQ96AJ9 217 aa10.19□□□□□ -0.78
CCDC58-204ENST00000479414 GAS2L1Q99501 681 aaPredicted RBP10.19□□□□□ -0.78
CCDC58-204ENST00000479414 NXF1Q9UBU9 619 aaKnown RBP10.19□□□□□ -0.78
CCDC58-204ENST00000479414 HCN4Q9Y3Q4 1203 aa10.19□□□□□ -0.78
CCDC58-204ENST00000479414 ITGA6P23229 1130 aa10.18□□□□□ -0.78
CCDC58-204ENST00000479414 ALDH16A1Q8IZ83 802 aa10.18□□□□□ -0.78
CCDC58-204ENST00000479414 PHACTR1Q9C0D0 580 aa10.18□□□□□ -0.78
CCDC58-204ENST00000479414 CRISPLD1Q9H336 500 aa10.18□□□□□ -0.78
CCDC58-204ENST00000479414 GPAMQ9HCL2 828 aa10.18□□□□□ -0.78
CCDC58-204ENST00000479414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC58-204ENST00000479414 GPC6Q9Y625 555 aaPredicted RBP10.18□□□□□ -0.78
CCDC58-204ENST00000479414 PTCD1O75127 700 aaKnown RBP10.17□□□□□ -0.78
CCDC58-204ENST00000479414 RTN1Q16799 776 aa10.16□□□□□ -0.78
CCDC58-204ENST00000479414 TRIM22Q8IYM9 498 aa10.16□□□□□ -0.78
CCDC58-204ENST00000479414 MYO19Q96H55 970 aa10.16□□□□□ -0.78
CCDC58-204ENST00000479414 GMCL1Q96IK5 515 aa10.16□□□□□ -0.78
CCDC58-204ENST00000479414 CUEDC1Q9NWM3 386 aaPredicted RBP10.16□□□□□ -0.78
CCDC58-204ENST00000479414 BRD1O95696 1058 aa10.15□□□□□ -0.78
CCDC58-204ENST00000479414 LBRQ14739 615 aaKnown RBP10.15□□□□□ -0.78
CCDC58-204ENST00000479414 RIPOR1Q6ZS17 1223 aa10.15□□□□□ -0.78
CCDC58-204ENST00000479414 ZIC5Q96T25 663 aa10.15□□□□□ -0.78
CCDC58-204ENST00000479414 MKNK1Q9BUB5 465 aa10.15□□□□□ -0.78
CCDC58-204ENST00000479414 RUBCNLQ9H714 662 aa10.15□□□□□ -0.78
CCDC58-204ENST00000479414 QTRT2Q9H974 415 aaKnown RBP10.15□□□□□ -0.78
CCDC58-204ENST00000479414 H3BM21 787 aa10.14□□□□□ -0.79
CCDC58-204ENST00000479414 H7C1W4 665 aa10.14□□□□□ -0.79
CCDC58-204ENST00000479414 PDIA4P13667 645 aaKnown RBP10.14□□□□□ -0.79
CCDC58-204ENST00000479414 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
CCDC58-204ENST00000479414 PGBD3Q8N328 593 aa10.14□□□□□ -0.79
CCDC58-204ENST00000479414 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
CCDC58-204ENST00000479414 NANOS1Q8WY41 292 aaKnown RBP10.14□□□□□ -0.79
CCDC58-204ENST00000479414 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
CCDC58-204ENST00000479414 A0A1W2PNR3 127 aa10.13□□□□□ -0.79
CCDC58-204ENST00000479414 TERTO14746 1132 aaKnown RBP10.13□□□□□ -0.79
CCDC58-204ENST00000479414 DBN1Q16643 649 aa10.13□□□□□ -0.79
CCDC58-204ENST00000479414 ARSJQ5FYB0 599 aaPredicted RBP10.13□□□□□ -0.79
CCDC58-204ENST00000479414 BICDL1Q6ZP65 573 aa10.13□□□□□ -0.79
CCDC58-204ENST00000479414 THBS1P07996 1170 aa10.12□□□□□ -0.79
CCDC58-204ENST00000479414 SCNN1AP37088 669 aa10.12□□□□□ -0.79
CCDC58-204ENST00000479414 EFHC2Q5JST6 749 aa10.12□□□□□ -0.79
CCDC58-204ENST00000479414 NLRP8Q86W28 1048 aa10.12□□□□□ -0.79
CCDC58-204ENST00000479414 ZNF837Q96EG3 531 aaPredicted RBP10.12□□□□□ -0.79
CCDC58-204ENST00000479414 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
CCDC58-204ENST00000479414 SEPT3Q9UH03 358 aa10.12□□□□□ -0.79
CCDC58-204ENST00000479414 COX20Q5RI15 118 aa10.11□□□□□ -0.79
CCDC58-204ENST00000479414 C16orf46Q6P387 395 aa10.11□□□□□ -0.79
CCDC58-204ENST00000479414 KLRG1Q96E93 195 aa10.11□□□□□ -0.79
CCDC58-204ENST00000479414 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
CCDC58-204ENST00000479414 ARID4AP29374 1257 aaPredicted RBP10.1□□□□□ -0.79
CCDC58-204ENST00000479414 VEGFBP49765 207 aa10.1□□□□□ -0.79
CCDC58-204ENST00000479414 UBAP2LQ14157 1087 aaKnown RBP10.1□□□□□ -0.79
CCDC58-204ENST00000479414 HIF1AQ16665 826 aa10.1□□□□□ -0.79
CCDC58-204ENST00000479414 SAP130Q9H0E3 1048 aa10.1□□□□□ -0.79
CCDC58-204ENST00000479414 MTMR7Q9Y216 660 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms