RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FAM69CQ0P6D2 419 aa9.25□□□□□ -0.93
CCDC171-207ENST00000478913 MTFR1Q15390 333 aa9.25□□□□□ -0.93
CCDC171-207ENST00000478913 ZSCAN1Q8NBB4 408 aa9.25□□□□□ -0.93
CCDC171-207ENST00000478913 EPHA4P54764 986 aa9.24□□□□□ -0.93
CCDC171-207ENST00000478913 TMEM214Q6NUQ4 689 aaKnown RBP9.24□□□□□ -0.93
CCDC171-207ENST00000478913 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
CCDC171-207ENST00000478913 RNF217Q8TC41 542 aa9.24□□□□□ -0.93
CCDC171-207ENST00000478913 CLP1Q92989 425 aaKnown RBP9.24□□□□□ -0.93
CCDC171-207ENST00000478913 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-207ENST00000478913 SOS2Q07890 1332 aaPredicted RBP9.24□□□□□ -0.93
CCDC171-207ENST00000478913 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
CCDC171-207ENST00000478913 GRIP2Q9C0E4 1043 aa9.23□□□□□ -0.93
CCDC171-207ENST00000478913 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
CCDC171-207ENST00000478913 SENP2Q9HC62 589 aa9.23□□□□□ -0.93
CCDC171-207ENST00000478913 NCAPD3P42695 1498 aa9.22□□□□□ -0.93
CCDC171-207ENST00000478913 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
CCDC171-207ENST00000478913 CDK2AP1O14519 115 aa9.22□□□□□ -0.93
CCDC171-207ENST00000478913 PRMT3O60678 531 aa9.22□□□□□ -0.93
CCDC171-207ENST00000478913 GNASQ5JWF2 1037 aa9.22□□□□□ -0.93
CCDC171-207ENST00000478913 LYSMD3Q7Z3D4 306 aa9.22□□□□□ -0.93
CCDC171-207ENST00000478913 WDR62O43379 1518 aa9.21□□□□□ -0.93
CCDC171-207ENST00000478913 MAN1A2O60476 641 aa9.21□□□□□ -0.94
CCDC171-207ENST00000478913 PDIA4P13667 645 aaKnown RBP9.21□□□□□ -0.94
CCDC171-207ENST00000478913 FOXK2Q01167 660 aa9.21□□□□□ -0.94
CCDC171-207ENST00000478913 TBCELQ5QJ74 424 aa9.21□□□□□ -0.94
CCDC171-207ENST00000478913 PRICKLE2Q7Z3G6 844 aa9.21□□□□□ -0.94
CCDC171-207ENST00000478913 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.94
CCDC171-207ENST00000478913 RHBDD1Q8TEB9 315 aa9.21□□□□□ -0.94
CCDC171-207ENST00000478913 SCG3Q8WXD2 468 aaKnown RBP9.21□□□□□ -0.94
CCDC171-207ENST00000478913 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
CCDC171-207ENST00000478913 IQSEC3Q9UPP2 1182 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-207ENST00000478913 RSF1Q96T23 1441 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-207ENST00000478913 FAM181BA6NEQ2 426 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 ATP2B4P23634 1241 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 PRIMPOLQ96LW4 560 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 CABP1Q9NZU7 370 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 ATAD2Q6PL18 1390 aa9.2□□□□□ -0.94
CCDC171-207ENST00000478913 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-207ENST00000478913 IGFBP4P22692 258 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 WEE1P30291 646 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 VEGFBP49765 207 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 B4GALNT3Q6L9W6 998 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 GAS2L2Q8NHY3 880 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
CCDC171-207ENST00000478913 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 NIFKQ9BYG3 293 aaKnown RBP9.19□□□□□ -0.94
CCDC171-207ENST00000478913 SLAIN2Q9P270 581 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 CHMP3Q9Y3E7 222 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 ERBB4Q15303 1308 aa9.19□□□□□ -0.94
CCDC171-207ENST00000478913 SPATA31C2B4DYI2 1134 aa9.18□□□□□ -0.94
CCDC171-207ENST00000478913 PSMA6P60900 246 aaKnown RBP9.18□□□□□ -0.94
CCDC171-207ENST00000478913 OCLNQ16625 522 aa9.18□□□□□ -0.94
CCDC171-207ENST00000478913 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
CCDC171-207ENST00000478913 TAS1R3Q7RTX0 852 aa9.18□□□□□ -0.94
CCDC171-207ENST00000478913 CXXC1Q9P0U4 656 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-207ENST00000478913 C21orf2O43822 256 aa9.17□□□□□ -0.94
CCDC171-207ENST00000478913 RHOQP17081 205 aa9.17□□□□□ -0.94
CCDC171-207ENST00000478913 PLA2G4AP47712 749 aa9.17□□□□□ -0.94
CCDC171-207ENST00000478913 GSK3AP49840 483 aa9.17□□□□□ -0.94
CCDC171-207ENST00000478913 POU4F2Q12837 409 aa9.17□□□□□ -0.94
CCDC171-207ENST00000478913 C4orf17Q53FE4 359 aa9.17□□□□□ -0.94
CCDC171-207ENST00000478913 NBPF10Q6P3W6 841 aaKnown RBP9.17□□□□□ -0.94
CCDC171-207ENST00000478913 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
CCDC171-207ENST00000478913 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
CCDC171-207ENST00000478913 FOXO3O43524 673 aa9.16□□□□□ -0.94
CCDC171-207ENST00000478913 PHKA2P46019 1235 aa9.16□□□□□ -0.94
CCDC171-207ENST00000478913 VTI1AQ96AJ9 217 aa9.16□□□□□ -0.94
CCDC171-207ENST00000478913 ZNF232Q9UNY5 417 aa9.16□□□□□ -0.94
CCDC171-207ENST00000478913 LAMC3Q9Y6N6 1575 aa9.16□□□□□ -0.94
CCDC171-207ENST00000478913 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.94
CCDC171-207ENST00000478913 SERTM1A2A2V5 107 aa9.15□□□□□ -0.94
CCDC171-207ENST00000478913 SSFA2P28290 1259 aa9.15□□□□□ -0.94
CCDC171-207ENST00000478913 TEAD4Q15561 434 aa9.15□□□□□ -0.94
CCDC171-207ENST00000478913 NOS2P35228 1153 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-207ENST00000478913 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 ZNF295-AS1Q8N0V1 137 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 STAG2Q8N3U4 1231 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 ZDHHC1Q8WTX9 485 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 L3MBTL2Q969R5 705 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 C2orf49Q9BVC5 232 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-207ENST00000478913 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
CCDC171-207ENST00000478913 BRD1O95696 1058 aa9.13□□□□□ -0.95
CCDC171-207ENST00000478913 SLC16A10Q8TF71 515 aa9.13□□□□□ -0.95
CCDC171-207ENST00000478913 MKNK1Q9BUB5 465 aa9.13□□□□□ -0.95
CCDC171-207ENST00000478913 TIMMDC1Q9NPL8 285 aa9.13□□□□□ -0.95
CCDC171-207ENST00000478913 EML1O00423 815 aa9.12□□□□□ -0.95
CCDC171-207ENST00000478913 NBPF1Q3BBV0 1214 aa9.12□□□□□ -0.95
CCDC171-207ENST00000478913 SH3PXD2AQ5TCZ1 1133 aa9.12□□□□□ -0.95
CCDC171-207ENST00000478913 KCTD17Q8N5Z5 321 aa9.12□□□□□ -0.95
CCDC171-207ENST00000478913 C1orf216Q8TAB5 229 aa9.12□□□□□ -0.95
CCDC171-207ENST00000478913 AIDAQ96BJ3 306 aa9.12□□□□□ -0.95
CCDC171-207ENST00000478913 A0A1B0GTH6 734 aa9.11□□□□□ -0.95
CCDC171-207ENST00000478913 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
CCDC171-207ENST00000478913 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-207ENST00000478913 PHLDB3Q6NSJ2 640 aa9.11□□□□□ -0.95
CCDC171-207ENST00000478913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC171-207ENST00000478913 H3BM21 787 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms