RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 HOXB7P09629 217 aa17.54■□□□□ 0.4
NUDCD3-207ENST00000478769 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
NUDCD3-207ENST00000478769 USP16Q9Y5T5 823 aa17.54■□□□□ 0.4
NUDCD3-207ENST00000478769 CNTNAP4Q9C0A0 1308 aa17.53■□□□□ 0.4
NUDCD3-207ENST00000478769 CRKLP46109 303 aaKnown RBP17.53■□□□□ 0.4
NUDCD3-207ENST00000478769 TUBGCP6Q96RT7 1819 aa17.53■□□□□ 0.4
NUDCD3-207ENST00000478769 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.4
NUDCD3-207ENST00000478769 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
NUDCD3-207ENST00000478769 TEX13AQ9BXU3 409 aaPredicted RBP17.52■□□□□ 0.4
NUDCD3-207ENST00000478769 UBR3Q6ZT12 1888 aa17.52■□□□□ 0.39
NUDCD3-207ENST00000478769 STARD3NLO95772 234 aa17.51■□□□□ 0.39
NUDCD3-207ENST00000478769 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
NUDCD3-207ENST00000478769 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
NUDCD3-207ENST00000478769 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
NUDCD3-207ENST00000478769 CCDC87Q9NVE4 849 aa17.51■□□□□ 0.39
NUDCD3-207ENST00000478769 ZBTB1Q9Y2K1 713 aa17.51■□□□□ 0.39
NUDCD3-207ENST00000478769 SOS1Q07889 1333 aaPredicted RBP17.5■□□□□ 0.39
NUDCD3-207ENST00000478769 A1BGP04217 495 aa17.5■□□□□ 0.39
NUDCD3-207ENST00000478769 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
NUDCD3-207ENST00000478769 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
NUDCD3-207ENST00000478769 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
NUDCD3-207ENST00000478769 VAMP4O75379 141 aa17.49■□□□□ 0.39
NUDCD3-207ENST00000478769 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
NUDCD3-207ENST00000478769 AK7Q96M32 723 aa17.49■□□□□ 0.39
NUDCD3-207ENST00000478769 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
NUDCD3-207ENST00000478769 GNPATO15228 680 aa17.48■□□□□ 0.39
NUDCD3-207ENST00000478769 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
NUDCD3-207ENST00000478769 NBPF14Q5TI25 921 aa17.48■□□□□ 0.39
NUDCD3-207ENST00000478769 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
NUDCD3-207ENST00000478769 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
NUDCD3-207ENST00000478769 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 PDIA6Q15084 440 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
NUDCD3-207ENST00000478769 ANXA1P04083 346 aa17.46■□□□□ 0.39
NUDCD3-207ENST00000478769 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
NUDCD3-207ENST00000478769 SLC15A2Q16348 729 aa17.46■□□□□ 0.39
NUDCD3-207ENST00000478769 COL15A1P39059 1388 aa17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 LRP10Q7Z4F1 713 aa17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
NUDCD3-207ENST00000478769 PHF14O94880 888 aa17.44■□□□□ 0.38
NUDCD3-207ENST00000478769 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
NUDCD3-207ENST00000478769 MYL6BP14649 208 aa17.44■□□□□ 0.38
NUDCD3-207ENST00000478769 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
NUDCD3-207ENST00000478769 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
NUDCD3-207ENST00000478769 SSFA2P28290 1259 aa17.43■□□□□ 0.38
NUDCD3-207ENST00000478769 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
NUDCD3-207ENST00000478769 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
NUDCD3-207ENST00000478769 DBF4Q9UBU7 674 aaPredicted RBP17.43■□□□□ 0.38
NUDCD3-207ENST00000478769 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
NUDCD3-207ENST00000478769 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
NUDCD3-207ENST00000478769 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
NUDCD3-207ENST00000478769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.42■□□□□ 0.38
NUDCD3-207ENST00000478769 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
NUDCD3-207ENST00000478769 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
NUDCD3-207ENST00000478769 R3HDM1Q15032 1099 aaKnown RBP17.41■□□□□ 0.38
NUDCD3-207ENST00000478769 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
NUDCD3-207ENST00000478769 STK31Q9BXU1 1019 aa17.41■□□□□ 0.38
NUDCD3-207ENST00000478769 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
NUDCD3-207ENST00000478769 ADRA2BP18089 450 aa17.4■□□□□ 0.38
NUDCD3-207ENST00000478769 RARSP54136 660 aaKnown RBP17.4■□□□□ 0.38
NUDCD3-207ENST00000478769 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
NUDCD3-207ENST00000478769 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
NUDCD3-207ENST00000478769 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
NUDCD3-207ENST00000478769 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.37
NUDCD3-207ENST00000478769 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
NUDCD3-207ENST00000478769 ARHGEF1Q92888 912 aaKnown RBP17.39■□□□□ 0.37
NUDCD3-207ENST00000478769 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
NUDCD3-207ENST00000478769 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
NUDCD3-207ENST00000478769 HYPKQ9NX55 129 aa17.39■□□□□ 0.37
NUDCD3-207ENST00000478769 PSDA5PKW4 1024 aaPredicted RBP17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 G2E3Q7L622 706 aa17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 SMC4Q9NTJ3 1288 aa17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 USP42Q9H9J4 1324 aaKnown RBP17.38■□□□□ 0.37
NUDCD3-207ENST00000478769 CACNA1FO60840 1977 aa17.37■□□□□ 0.37
NUDCD3-207ENST00000478769 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
NUDCD3-207ENST00000478769 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
NUDCD3-207ENST00000478769 TBC1D2BQ9UPU7 963 aa17.37■□□□□ 0.37
NUDCD3-207ENST00000478769 A0A087WZG4 1122 aa17.36■□□□□ 0.37
NUDCD3-207ENST00000478769 CAMTA2O94983 1202 aa17.36■□□□□ 0.37
NUDCD3-207ENST00000478769 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
NUDCD3-207ENST00000478769 COPS6Q7L5N1 327 aa17.36■□□□□ 0.37
NUDCD3-207ENST00000478769 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
NUDCD3-207ENST00000478769 MSH5O43196 834 aa17.35■□□□□ 0.37
NUDCD3-207ENST00000478769 RFC4P35249 363 aa17.35■□□□□ 0.37
NUDCD3-207ENST00000478769 FLIIQ13045 1269 aa17.35■□□□□ 0.37
NUDCD3-207ENST00000478769 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
NUDCD3-207ENST00000478769 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms