RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 SOS1Q07889 1333 aaPredicted RBP19.84■□□□□ 0.77
SNX21-210ENST00000478230 ANP32CO43423 234 aa19.84■□□□□ 0.77
SNX21-210ENST00000478230 MMP10P09238 476 aa19.84■□□□□ 0.77
SNX21-210ENST00000478230 USP42Q9H9J4 1324 aaKnown RBP19.83■□□□□ 0.77
SNX21-210ENST00000478230 TJP1Q07157 1748 aa19.83■□□□□ 0.77
SNX21-210ENST00000478230 CANXP27824 592 aaKnown RBP19.83■□□□□ 0.77
SNX21-210ENST00000478230 IL6STP40189 918 aaPredicted RBP19.82■□□□□ 0.76
SNX21-210ENST00000478230 TMPOP42166 694 aaKnown RBP19.82■□□□□ 0.76
SNX21-210ENST00000478230 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
SNX21-210ENST00000478230 NARFQ9UHQ1 456 aa19.82■□□□□ 0.76
SNX21-210ENST00000478230 ZBTB1Q9Y2K1 713 aa19.82■□□□□ 0.76
SNX21-210ENST00000478230 MYH14Q7Z406 1995 aaKnown RBP19.82■□□□□ 0.76
SNX21-210ENST00000478230 UBR2Q8IWV8 1755 aa19.82■□□□□ 0.76
SNX21-210ENST00000478230 SIPA1L3O60292 1781 aaPredicted RBP19.81■□□□□ 0.76
SNX21-210ENST00000478230 GRIN3BO60391 1043 aa19.81■□□□□ 0.76
SNX21-210ENST00000478230 ADAMTS8Q9UP79 889 aa19.81■□□□□ 0.76
SNX21-210ENST00000478230 COL15A1P39059 1388 aa19.81■□□□□ 0.76
SNX21-210ENST00000478230 KCNQ3O43525 872 aa19.8■□□□□ 0.76
SNX21-210ENST00000478230 EIF5P55010 431 aaKnown RBP19.8■□□□□ 0.76
SNX21-210ENST00000478230 USPL1Q5W0Q7 1092 aa19.79■□□□□ 0.76
SNX21-210ENST00000478230 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
SNX21-210ENST00000478230 SRP68Q9UHB9 627 aaKnown RBP19.79■□□□□ 0.76
SNX21-210ENST00000478230 TGFB2P61812 414 aa19.78■□□□□ 0.76
SNX21-210ENST00000478230 NLGN2Q8NFZ4 835 aa19.78■□□□□ 0.76
SNX21-210ENST00000478230 A1BGP04217 495 aa19.77■□□□□ 0.76
SNX21-210ENST00000478230 FKBP8Q14318 412 aa19.77■□□□□ 0.76
SNX21-210ENST00000478230 CCDC146Q8IYE0 955 aa19.77■□□□□ 0.76
SNX21-210ENST00000478230 ZNF330Q9Y3S2 320 aaPredicted RBP19.77■□□□□ 0.76
SNX21-210ENST00000478230 USP16Q9Y5T5 823 aa19.77■□□□□ 0.76
SNX21-210ENST00000478230 YY1P25490 414 aa19.76■□□□□ 0.75
SNX21-210ENST00000478230 NEUROD2Q15784 382 aa19.76■□□□□ 0.75
SNX21-210ENST00000478230 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
SNX21-210ENST00000478230 TM4SF1P30408 202 aa19.75■□□□□ 0.75
SNX21-210ENST00000478230 MIS18AQ9NYP9 233 aa19.75■□□□□ 0.75
SNX21-210ENST00000478230 EIF4A1P60842 406 aaKnown RBP19.74■□□□□ 0.75
SNX21-210ENST00000478230 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
SNX21-210ENST00000478230 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
SNX21-210ENST00000478230 DLG5Q8TDM6 1919 aa19.74■□□□□ 0.75
SNX21-210ENST00000478230 RGL2O15211 777 aa19.73■□□□□ 0.75
SNX21-210ENST00000478230 GIGYF1O75420 1035 aaPredicted RBP19.73■□□□□ 0.75
SNX21-210ENST00000478230 ZNF652Q9Y2D9 606 aa19.73■□□□□ 0.75
SNX21-210ENST00000478230 C4AP0C0L4 1744 aa19.72■□□□□ 0.75
SNX21-210ENST00000478230 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
SNX21-210ENST00000478230 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
SNX21-210ENST00000478230 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
SNX21-210ENST00000478230 CLEC4GQ6UXB4 293 aa19.71■□□□□ 0.75
SNX21-210ENST00000478230 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.75
SNX21-210ENST00000478230 NFIXQ14938 502 aa19.7■□□□□ 0.74
SNX21-210ENST00000478230 ERBB4Q15303 1308 aa19.7■□□□□ 0.74
SNX21-210ENST00000478230 SERPINB2P05120 415 aa19.69■□□□□ 0.74
SNX21-210ENST00000478230 SETDB2Q96T68 719 aa19.69■□□□□ 0.74
SNX21-210ENST00000478230 MRS2Q9HD23 443 aa19.69■□□□□ 0.74
SNX21-210ENST00000478230 C10orf71Q711Q0 1435 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 CHL1O00533 1208 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 APAF1O14727 1248 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 DDR1Q08345 913 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 BCL2L12Q9HB09 334 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 TRIM35Q9UPQ4 493 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 PDZRN3Q9UPQ7 1066 aa19.68■□□□□ 0.74
SNX21-210ENST00000478230 NPHP1O15259 732 aa19.67■□□□□ 0.74
SNX21-210ENST00000478230 LAS1LQ9Y4W2 734 aaKnown RBP19.67■□□□□ 0.74
SNX21-210ENST00000478230 CAMTA2O94983 1202 aa19.66■□□□□ 0.74
SNX21-210ENST00000478230 YBX3P16989 372 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNX21-210ENST00000478230 BICDL1Q6ZP65 573 aa19.66■□□□□ 0.74
SNX21-210ENST00000478230 CFAP44Q96MT7 982 aa19.66■□□□□ 0.74
SNX21-210ENST00000478230 CHMP4AQ9BY43 222 aa19.66■□□□□ 0.74
SNX21-210ENST00000478230 PIM2Q9P1W9 311 aa19.66■□□□□ 0.74
SNX21-210ENST00000478230 KDM3BQ7LBC6 1761 aa19.65■□□□□ 0.74
SNX21-210ENST00000478230 A0A0G2JLW4 131 aa19.65■□□□□ 0.74
SNX21-210ENST00000478230 TBC1D9BQ66K14 1250 aa19.65■□□□□ 0.74
SNX21-210ENST00000478230 CARMIL3Q8ND23 1372 aa19.65■□□□□ 0.74
SNX21-210ENST00000478230 NBPF26B4DH59 902 aa19.64■□□□□ 0.73
SNX21-210ENST00000478230 DPEP1P16444 411 aa19.64■□□□□ 0.73
SNX21-210ENST00000478230 GNAI1P63096 354 aa19.64■□□□□ 0.73
SNX21-210ENST00000478230 NBPF10Q6P3W6 841 aaKnown RBP19.64■□□□□ 0.73
SNX21-210ENST00000478230 KIF6Q6ZMV9 814 aa19.64■□□□□ 0.73
SNX21-210ENST00000478230 NBPF15Q8N660 670 aa19.64■□□□□ 0.73
SNX21-210ENST00000478230 PXDNLA1KZ92 1463 aa19.63■□□□□ 0.73
SNX21-210ENST00000478230 ERVV-1B6SEH8 477 aa19.63■□□□□ 0.73
SNX21-210ENST00000478230 HOXB7P09629 217 aa19.63■□□□□ 0.73
SNX21-210ENST00000478230 PIP4K2AP48426 406 aaPredicted RBP19.63■□□□□ 0.73
SNX21-210ENST00000478230 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
SNX21-210ENST00000478230 BCS1LQ9Y276 419 aa19.63■□□□□ 0.73
SNX21-210ENST00000478230 KIF13BQ9NQT8 1826 aa19.62■□□□□ 0.73
SNX21-210ENST00000478230 EIF2S2P20042 333 aaKnown RBP19.62■□□□□ 0.73
SNX21-210ENST00000478230 PDE6BP35913 854 aa19.62■□□□□ 0.73
SNX21-210ENST00000478230 ST5P78524 1137 aa19.62■□□□□ 0.73
SNX21-210ENST00000478230 H0YIN7 160 aa19.61■□□□□ 0.73
SNX21-210ENST00000478230 DALRD3Q5D0E6 543 aaKnown RBP19.61■□□□□ 0.73
SNX21-210ENST00000478230 TPTE2Q6XPS3 522 aa19.61■□□□□ 0.73
SNX21-210ENST00000478230 BRIP1Q9BX63 1249 aa19.61■□□□□ 0.73
SNX21-210ENST00000478230 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
SNX21-210ENST00000478230 MYL6BP14649 208 aa19.6■□□□□ 0.73
SNX21-210ENST00000478230 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
SNX21-210ENST00000478230 CCDC184Q52MB2 194 aa19.6■□□□□ 0.73
SNX21-210ENST00000478230 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
SNX21-210ENST00000478230 CNBD1Q8NA66 436 aa19.6■□□□□ 0.73
SNX21-210ENST00000478230 CHD4Q14839 1912 aa19.6■□□□□ 0.73
SNX21-210ENST00000478230 NBPF5PQ86XG9 351 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms