RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CANXP27824 592 aaKnown RBP30.01■■■□□ 2.39
TRAF4-211ENST00000478021 TMPOP42166 694 aaKnown RBP30.01■■■□□ 2.39
TRAF4-211ENST00000478021 RIPK4P57078 832 aa30.01■■■□□ 2.39
TRAF4-211ENST00000478021 RRP7AQ9Y3A4 280 aaKnown RBP30.01■■■□□ 2.39
TRAF4-211ENST00000478021 KDM3BQ7LBC6 1761 aa30■■■□□ 2.39
TRAF4-211ENST00000478021 STARD3NLO95772 234 aa30■■■□□ 2.39
TRAF4-211ENST00000478021 COL15A1P39059 1388 aa30■■■□□ 2.39
TRAF4-211ENST00000478021 USP42Q9H9J4 1324 aaKnown RBP29.99■■■□□ 2.39
TRAF4-211ENST00000478021 MMP10P09238 476 aa29.99■■■□□ 2.39
TRAF4-211ENST00000478021 RUNDC1Q96C34 613 aa29.99■■■□□ 2.39
TRAF4-211ENST00000478021 TEX13AQ9BXU3 409 aaPredicted RBP29.99■■■□□ 2.39
TRAF4-211ENST00000478021 PRAMEF22A3QJZ6 481 aa29.98■■■□□ 2.39
TRAF4-211ENST00000478021 DCAF8L1A6NGE4 600 aa29.98■■■□□ 2.39
TRAF4-211ENST00000478021 NEUROD2Q15784 382 aa29.98■■■□□ 2.39
TRAF4-211ENST00000478021 CCDC184Q52MB2 194 aa29.98■■■□□ 2.39
TRAF4-211ENST00000478021 NLGN1Q8N2Q7 840 aa29.98■■■□□ 2.39
TRAF4-211ENST00000478021 ANP32CO43423 234 aa29.95■■■□□ 2.39
TRAF4-211ENST00000478021 USPL1Q5W0Q7 1092 aa29.95■■■□□ 2.39
TRAF4-211ENST00000478021 USP16Q9Y5T5 823 aa29.95■■■□□ 2.39
TRAF4-211ENST00000478021 A1BGP04217 495 aa29.94■■■□□ 2.38
TRAF4-211ENST00000478021 FKBP8Q14318 412 aa29.94■■■□□ 2.38
TRAF4-211ENST00000478021 PNISRQ8TF01 805 aaKnown RBP29.94■■■□□ 2.38
TRAF4-211ENST00000478021 ZNF330Q9Y3S2 320 aaPredicted RBP29.94■■■□□ 2.38
TRAF4-211ENST00000478021 ZPR1O75312 459 aa29.93■■■□□ 2.38
TRAF4-211ENST00000478021 SNRPA1P09661 255 aaKnown RBP29.92■■■□□ 2.38
TRAF4-211ENST00000478021 LMOD3Q0VAK6 560 aa29.92■■■□□ 2.38
TRAF4-211ENST00000478021 CD2APQ9Y5K6 639 aa29.92■■■□□ 2.38
TRAF4-211ENST00000478021 LAMB4A4D0S4 1761 aa29.91■■■□□ 2.38
TRAF4-211ENST00000478021 PIP4K2AP48426 406 aaPredicted RBP29.91■■■□□ 2.38
TRAF4-211ENST00000478021 EIF5P55010 431 aaKnown RBP29.91■■■□□ 2.38
TRAF4-211ENST00000478021 PELP1Q8IZL8 1130 aaKnown RBP29.91■■■□□ 2.38
TRAF4-211ENST00000478021 NARFQ9UHQ1 456 aa29.9■■■□□ 2.38
TRAF4-211ENST00000478021 PARP3Q9Y6F1 533 aa29.89■■■□□ 2.38
TRAF4-211ENST00000478021 IL6STP40189 918 aaPredicted RBP29.87■■■□□ 2.37
TRAF4-211ENST00000478021 GPR162Q16538 588 aa29.87■■■□□ 2.37
TRAF4-211ENST00000478021 TSPYL4Q9UJ04 414 aa29.87■■■□□ 2.37
TRAF4-211ENST00000478021 TRIM35Q9UPQ4 493 aa29.87■■■□□ 2.37
TRAF4-211ENST00000478021 KIF13BQ9NQT8 1826 aa29.87■■■□□ 2.37
TRAF4-211ENST00000478021 SCN7AQ01118 1682 aa29.86■■■□□ 2.37
TRAF4-211ENST00000478021 EIF4A1P60842 406 aaKnown RBP29.86■■■□□ 2.37
TRAF4-211ENST00000478021 DDR1Q08345 913 aa29.86■■■□□ 2.37
TRAF4-211ENST00000478021 BCL2L12Q9HB09 334 aa29.86■■■□□ 2.37
TRAF4-211ENST00000478021 A0A087WZG4 1122 aa29.85■■■□□ 2.37
TRAF4-211ENST00000478021 TBC1D2BQ9UPU7 963 aa29.85■■■□□ 2.37
TRAF4-211ENST00000478021 MRS2Q9HD23 443 aa29.84■■■□□ 2.37
TRAF4-211ENST00000478021 C10orf71Q711Q0 1435 aa29.83■■■□□ 2.37
TRAF4-211ENST00000478021 APAF1O14727 1248 aa29.83■■■□□ 2.37
TRAF4-211ENST00000478021 WWC3Q9ULE0 1092 aa29.83■■■□□ 2.37
TRAF4-211ENST00000478021 N4BP2Q86UW6 1770 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-211ENST00000478021 GIGYF1O75420 1035 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-211ENST00000478021 TM4SF1P30408 202 aa29.82■■■□□ 2.36
TRAF4-211ENST00000478021 NPM2Q86SE8 214 aaKnown RBP29.82■■■□□ 2.36
TRAF4-211ENST00000478021 KIAA1551Q9HCM1 1747 aa29.82■■■□□ 2.36
TRAF4-211ENST00000478021 AFDNP55196 1824 aaKnown RBP29.81■■■□□ 2.36
TRAF4-211ENST00000478021 POLRMTO00411 1230 aaKnown RBP29.81■■■□□ 2.36
TRAF4-211ENST00000478021 NFIXQ14938 502 aa29.81■■■□□ 2.36
TRAF4-211ENST00000478021 LAS1LQ9Y4W2 734 aaKnown RBP29.81■■■□□ 2.36
TRAF4-211ENST00000478021 BCORQ6W2J9 1755 aa29.81■■■□□ 2.36
TRAF4-211ENST00000478021 NBPF26B4DH59 902 aa29.8■■■□□ 2.36
TRAF4-211ENST00000478021 NBPF10Q6P3W6 841 aaKnown RBP29.8■■■□□ 2.36
TRAF4-211ENST00000478021 NBPF15Q8N660 670 aa29.8■■■□□ 2.36
TRAF4-211ENST00000478021 YBX3P16989 372 aaKnown RBP eCLIP29.79■■■□□ 2.36
TRAF4-211ENST00000478021 BICDL1Q6ZP65 573 aa29.79■■■□□ 2.36
TRAF4-211ENST00000478021 DZIP3Q86Y13 1208 aaKnown RBP29.79■■■□□ 2.36
TRAF4-211ENST00000478021 PXDNLA1KZ92 1463 aa29.78■■■□□ 2.36
TRAF4-211ENST00000478021 SENP3-EIF4A1A0A087X0R7 540 aa29.77■■■□□ 2.36
TRAF4-211ENST00000478021 CAMTA2O94983 1202 aa29.76■■■□□ 2.35
TRAF4-211ENST00000478021 BABAM1Q9NWV8 329 aa29.76■■■□□ 2.35
TRAF4-211ENST00000478021 TBC1D9BQ66K14 1250 aa29.75■■■□□ 2.35
TRAF4-211ENST00000478021 NRXN2Q9P2S2 1712 aa29.75■■■□□ 2.35
TRAF4-211ENST00000478021 CHD4Q14839 1912 aa29.75■■■□□ 2.35
TRAF4-211ENST00000478021 YY1P25490 414 aa29.74■■■□□ 2.35
TRAF4-211ENST00000478021 A0A0G2JLW4 131 aa29.73■■■□□ 2.35
TRAF4-211ENST00000478021 CHL1O00533 1208 aa29.73■■■□□ 2.35
TRAF4-211ENST00000478021 SERPINB2P05120 415 aa29.73■■■□□ 2.35
TRAF4-211ENST00000478021 NGEFQ8N5V2 710 aa29.73■■■□□ 2.35
TRAF4-211ENST00000478021 TGFB2P61812 414 aa29.72■■■□□ 2.35
TRAF4-211ENST00000478021 DPEP1P16444 411 aa29.71■■■□□ 2.35
TRAF4-211ENST00000478021 KRT24Q2M2I5 525 aa29.71■■■□□ 2.35
TRAF4-211ENST00000478021 MYL6BP14649 208 aa29.7■■■□□ 2.35
TRAF4-211ENST00000478021 EIF2S2P20042 333 aaKnown RBP29.7■■■□□ 2.35
TRAF4-211ENST00000478021 BRCA1P38398 1863 aaKnown RBP29.68■■■□□ 2.34
TRAF4-211ENST00000478021 GRIN3BO60391 1043 aa29.67■■■□□ 2.34
TRAF4-211ENST00000478021 NECTIN2Q92692 538 aa29.67■■■□□ 2.34
TRAF4-211ENST00000478021 CFAP44Q96MT7 982 aa29.67■■■□□ 2.34
TRAF4-211ENST00000478021 UTRNP46939 3433 aa29.67■■■□□ 2.34
TRAF4-211ENST00000478021 CARMIL3Q8ND23 1372 aa29.66■■■□□ 2.34
TRAF4-211ENST00000478021 CHRNA5P30532 468 aa29.65■■■□□ 2.34
TRAF4-211ENST00000478021 MBIPQ9NS73 344 aa29.65■■■□□ 2.34
TRAF4-211ENST00000478021 SETDB2Q96T68 719 aa29.64■■■□□ 2.34
TRAF4-211ENST00000478021 ZNF652Q9Y2D9 606 aa29.64■■■□□ 2.34
TRAF4-211ENST00000478021 ANXA1P04083 346 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 KCNA3P22001 575 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 HLFQ16534 295 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 CLEC4GQ6UXB4 293 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 TTLL7Q6ZT98 887 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 CCDC24Q8N4L8 307 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 BCS1LQ9Y276 419 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 ERBB4Q15303 1308 aa29.63■■■□□ 2.33
TRAF4-211ENST00000478021 ANKRD31Q8N7Z5 1873 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms