RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 TEAD4Q15561 434 aa8.72□□□□□ -1.01
SMNDC1-205ENST00000477763 SWI5Q1ZZU3 235 aa8.72□□□□□ -1.01
SMNDC1-205ENST00000477763 USP3Q9Y6I4 520 aa8.72□□□□□ -1.01
SMNDC1-205ENST00000477763 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
SMNDC1-205ENST00000477763 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
SMNDC1-205ENST00000477763 POTEAQ6S8J7 498 aa8.71□□□□□ -1.02
SMNDC1-205ENST00000477763 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
SMNDC1-205ENST00000477763 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
SMNDC1-205ENST00000477763 GMCL1Q96IK5 515 aa8.71□□□□□ -1.02
SMNDC1-205ENST00000477763 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.02
SMNDC1-205ENST00000477763 F11P03951 625 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 ITGA6P23229 1130 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 PHKA2P46019 1235 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 PLA2G4AP47712 749 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 HIRAP54198 1017 aaPredicted RBP8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 STK32AQ8WU08 396 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 HINFPQ9BQA5 517 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
SMNDC1-205ENST00000477763 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
SMNDC1-205ENST00000477763 IGFBP4P22692 258 aa8.69□□□□□ -1.02
SMNDC1-205ENST00000477763 NANOS1Q8WY41 292 aaKnown RBP8.69□□□□□ -1.02
SMNDC1-205ENST00000477763 ZDHHC3Q9NYG2 299 aa8.69□□□□□ -1.02
SMNDC1-205ENST00000477763 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
SMNDC1-205ENST00000477763 SERTM1A2A2V5 107 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 C21orf2O43822 256 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 NOS2P35228 1153 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 FAM69CQ0P6D2 419 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 NBPF1Q3BBV0 1214 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 TMEM164Q5U3C3 297 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
SMNDC1-205ENST00000477763 H7C1W4 665 aa8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 PPP1R12BO60237 982 aaPredicted RBP8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 MSX1P28360 303 aa8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 WEE1P30291 646 aa8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 LBRQ14739 615 aaKnown RBP8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 GAS2L1Q99501 681 aaPredicted RBP8.67□□□□□ -1.02
SMNDC1-205ENST00000477763 EML1O00423 815 aa8.66□□□□□ -1.02
SMNDC1-205ENST00000477763 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
SMNDC1-205ENST00000477763 C2orf49Q9BVC5 232 aaPredicted RBP8.66□□□□□ -1.02
SMNDC1-205ENST00000477763 FOXO3O43524 673 aa8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 CSB-PGBD3P0DP91 1061 aa8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 ATP4AP20648 1035 aa8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 CLP1Q92989 425 aaKnown RBP8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 CRISPLD1Q9H336 500 aa8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 ZNF232Q9UNY5 417 aa8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 GPC6Q9Y625 555 aaPredicted RBP8.65□□□□□ -1.02
SMNDC1-205ENST00000477763 C1orf53Q5VUE5 145 aa8.64□□□□□ -1.03
SMNDC1-205ENST00000477763 PGBD3Q8N328 593 aa8.64□□□□□ -1.03
SMNDC1-205ENST00000477763 GPR161Q8N6U8 529 aaKnown RBP8.64□□□□□ -1.03
SMNDC1-205ENST00000477763 AIDAQ96BJ3 306 aa8.64□□□□□ -1.03
SMNDC1-205ENST00000477763 CUEDC1Q9NWM3 386 aaPredicted RBP8.64□□□□□ -1.03
SMNDC1-205ENST00000477763 PARP3Q9Y6F1 533 aa8.64□□□□□ -1.03
SMNDC1-205ENST00000477763 OCLNQ16625 522 aa8.63□□□□□ -1.03
SMNDC1-205ENST00000477763 DBN1Q16643 649 aa8.63□□□□□ -1.03
SMNDC1-205ENST00000477763 SV2AQ7L0J3 742 aa8.63□□□□□ -1.03
SMNDC1-205ENST00000477763 ZNF837Q96EG3 531 aaPredicted RBP8.63□□□□□ -1.03
SMNDC1-205ENST00000477763 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
SMNDC1-205ENST00000477763 USTQ9Y2C2 406 aa8.63□□□□□ -1.03
SMNDC1-205ENST00000477763 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
SMNDC1-205ENST00000477763 TXLNAP40222 546 aa8.62□□□□□ -1.03
SMNDC1-205ENST00000477763 KRT76Q01546 638 aa8.62□□□□□ -1.03
SMNDC1-205ENST00000477763 EFHC2Q5JST6 749 aa8.62□□□□□ -1.03
SMNDC1-205ENST00000477763 VWA5B2Q8N398 1253 aa8.62□□□□□ -1.03
SMNDC1-205ENST00000477763 NUCKS1Q9H1E3 243 aaKnown RBP8.62□□□□□ -1.03
SMNDC1-205ENST00000477763 SH3PXD2AQ5TCZ1 1133 aa8.61□□□□□ -1.03
SMNDC1-205ENST00000477763 NLRP8Q86W28 1048 aa8.61□□□□□ -1.03
SMNDC1-205ENST00000477763 RUBCNLQ9H714 662 aa8.61□□□□□ -1.03
SMNDC1-205ENST00000477763 CDC14CA4D256 554 aa8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 PRMT3O60678 531 aa8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 LGR5O75473 907 aa8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 FOXR1Q6PIV2 292 aa8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 ZIC5Q96T25 663 aa8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
SMNDC1-205ENST00000477763 THBS1P07996 1170 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 PDE4CQ08493 712 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 FIGNL1Q6PIW4 674 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 ALDH16A1Q8IZ83 802 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 COL26A1Q96A83 441 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 PRIMPOLQ96LW4 560 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMNDC1-205ENST00000477763 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
SMNDC1-205ENST00000477763 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
SMNDC1-205ENST00000477763 BICDL1Q6ZP65 573 aa8.58□□□□□ -1.04
SMNDC1-205ENST00000477763 VTI1AQ96AJ9 217 aa8.58□□□□□ -1.04
SMNDC1-205ENST00000477763 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
SMNDC1-205ENST00000477763 HCN4Q9Y3Q4 1203 aa8.58□□□□□ -1.04
SMNDC1-205ENST00000477763 ATP2B4P23634 1241 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 GSK3AP49840 483 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 HIF1AQ16665 826 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms