RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
NIFK-205ENST00000477693 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 RUNDC1Q96C34 613 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
NIFK-205ENST00000477693 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
NIFK-205ENST00000477693 TMPOP42166 694 aaKnown RBP12.88□□□□□ -0.35
NIFK-205ENST00000477693 PTGER2P43116 358 aa12.88□□□□□ -0.35
NIFK-205ENST00000477693 CCDC184Q52MB2 194 aa12.88□□□□□ -0.35
NIFK-205ENST00000477693 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
NIFK-205ENST00000477693 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
NIFK-205ENST00000477693 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
NIFK-205ENST00000477693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
NIFK-205ENST00000477693 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
NIFK-205ENST00000477693 GNPATO15228 680 aa12.87□□□□□ -0.35
NIFK-205ENST00000477693 RIPK4P57078 832 aa12.87□□□□□ -0.35
NIFK-205ENST00000477693 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
NIFK-205ENST00000477693 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
NIFK-205ENST00000477693 COL24A1Q17RW2 1714 aa12.87□□□□□ -0.35
NIFK-205ENST00000477693 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
NIFK-205ENST00000477693 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
NIFK-205ENST00000477693 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
NIFK-205ENST00000477693 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
NIFK-205ENST00000477693 DNAJC10Q8IXB1 793 aa12.86□□□□□ -0.35
NIFK-205ENST00000477693 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
NIFK-205ENST00000477693 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
NIFK-205ENST00000477693 PHF14O94880 888 aa12.85□□□□□ -0.35
NIFK-205ENST00000477693 CYP19A1P11511 503 aaPredicted RBP12.85□□□□□ -0.35
NIFK-205ENST00000477693 FMNL2Q96PY5 1086 aa12.85□□□□□ -0.35
NIFK-205ENST00000477693 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
NIFK-205ENST00000477693 KCNQ3O43525 872 aa12.84□□□□□ -0.35
NIFK-205ENST00000477693 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
NIFK-205ENST00000477693 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
NIFK-205ENST00000477693 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
NIFK-205ENST00000477693 TEX13AQ9BXU3 409 aaPredicted RBP12.84□□□□□ -0.35
NIFK-205ENST00000477693 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
NIFK-205ENST00000477693 TRAPPC3LQ5T215 181 aa12.83□□□□□ -0.36
NIFK-205ENST00000477693 FAM9BQ8IZU0 186 aa12.83□□□□□ -0.36
NIFK-205ENST00000477693 CCDC87Q9NVE4 849 aa12.83□□□□□ -0.36
NIFK-205ENST00000477693 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
NIFK-205ENST00000477693 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
NIFK-205ENST00000477693 STARD3NLO95772 234 aa12.82□□□□□ -0.36
NIFK-205ENST00000477693 POLD1P28340 1107 aa12.82□□□□□ -0.36
NIFK-205ENST00000477693 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
NIFK-205ENST00000477693 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
NIFK-205ENST00000477693 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
NIFK-205ENST00000477693 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
NIFK-205ENST00000477693 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
NIFK-205ENST00000477693 ARXQ96QS3 562 aa12.81□□□□□ -0.36
NIFK-205ENST00000477693 MIS18AQ9NYP9 233 aa12.81□□□□□ -0.36
NIFK-205ENST00000477693 ZBTB1Q9Y2K1 713 aa12.81□□□□□ -0.36
NIFK-205ENST00000477693 C4AP0C0L4 1744 aa12.8□□□□□ -0.36
NIFK-205ENST00000477693 APAF1O14727 1248 aa12.8□□□□□ -0.36
NIFK-205ENST00000477693 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
NIFK-205ENST00000477693 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
NIFK-205ENST00000477693 RFC4P35249 363 aa12.79□□□□□ -0.36
NIFK-205ENST00000477693 EIF4A1P60842 406 aaKnown RBP12.79□□□□□ -0.36
NIFK-205ENST00000477693 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
NIFK-205ENST00000477693 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
NIFK-205ENST00000477693 COL15A1P39059 1388 aa12.79□□□□□ -0.36
NIFK-205ENST00000477693 PRAMEF22A3QJZ6 481 aa12.78□□□□□ -0.36
NIFK-205ENST00000477693 GYS1P13807 737 aa12.78□□□□□ -0.36
NIFK-205ENST00000477693 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
NIFK-205ENST00000477693 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
NIFK-205ENST00000477693 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
NIFK-205ENST00000477693 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.37
NIFK-205ENST00000477693 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
NIFK-205ENST00000477693 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
NIFK-205ENST00000477693 NLGN1Q8N2Q7 840 aa12.77□□□□□ -0.37
NIFK-205ENST00000477693 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.37
NIFK-205ENST00000477693 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 CHD4Q14839 1912 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 CHL1O00533 1208 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 CANXP27824 592 aaKnown RBP12.76□□□□□ -0.37
NIFK-205ENST00000477693 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 SYT17Q9BSW7 474 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
NIFK-205ENST00000477693 A0A087WZG4 1122 aa12.75□□□□□ -0.37
NIFK-205ENST00000477693 ZPR1O75312 459 aa12.75□□□□□ -0.37
NIFK-205ENST00000477693 A1BGP04217 495 aa12.75□□□□□ -0.37
NIFK-205ENST00000477693 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
NIFK-205ENST00000477693 C1QTNF8P60827 252 aa12.75□□□□□ -0.37
NIFK-205ENST00000477693 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
NIFK-205ENST00000477693 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
NIFK-205ENST00000477693 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
NIFK-205ENST00000477693 ZBED9Q6R2W3 1325 aa12.74□□□□□ -0.37
NIFK-205ENST00000477693 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
NIFK-205ENST00000477693 MMP10P09238 476 aa12.74□□□□□ -0.37
NIFK-205ENST00000477693 ZNF853P0CG23 659 aa12.74□□□□□ -0.37
NIFK-205ENST00000477693 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 FKBP8Q14318 412 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
NIFK-205ENST00000477693 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 SCN7AQ01118 1682 aa12.73□□□□□ -0.37
NIFK-205ENST00000477693 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms