RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 FTSJ3Q8IY81 847 aaKnown RBP15.42■□□□□ 0.06
PRPF39-203ENST00000477626 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 JCADQ9P266 1359 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 COL24A1Q17RW2 1714 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 FNBP4Q8N3X1 1017 aaPredicted RBP15.42■□□□□ 0.06
PRPF39-203ENST00000477626 THRAP3Q9Y2W1 955 aaKnown RBP15.42■□□□□ 0.06
PRPF39-203ENST00000477626 SALL3Q9BXA9 1300 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 CEP85Q6P2H3 762 aa15.42■□□□□ 0.06
PRPF39-203ENST00000477626 MYH3P11055 1940 aa15.41■□□□□ 0.06
PRPF39-203ENST00000477626 ZNF496Q96IT1 587 aaPredicted RBP15.41■□□□□ 0.06
PRPF39-203ENST00000477626 LRP5O75197 1615 aa15.41■□□□□ 0.06
PRPF39-203ENST00000477626 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
PRPF39-203ENST00000477626 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
PRPF39-203ENST00000477626 MEIS3Q99687 375 aa15.4■□□□□ 0.06
PRPF39-203ENST00000477626 ATRNO75882 1429 aa15.4■□□□□ 0.06
PRPF39-203ENST00000477626 USP44Q9H0E7 712 aa15.4■□□□□ 0.06
PRPF39-203ENST00000477626 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
PRPF39-203ENST00000477626 C4BP0C0L5 1744 aa15.4■□□□□ 0.06
PRPF39-203ENST00000477626 TOM1L2Q6ZVM7 507 aa15.39■□□□□ 0.05
PRPF39-203ENST00000477626 F6X3S4 739 aa15.39■□□□□ 0.05
PRPF39-203ENST00000477626 PDZRN3Q9UPQ7 1066 aa15.39■□□□□ 0.05
PRPF39-203ENST00000477626 CCT4P50991 539 aaKnown RBP15.38■□□□□ 0.05
PRPF39-203ENST00000477626 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
PRPF39-203ENST00000477626 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
PRPF39-203ENST00000477626 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
PRPF39-203ENST00000477626 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
PRPF39-203ENST00000477626 HDGFL1Q5TGJ6 251 aa15.38■□□□□ 0.05
PRPF39-203ENST00000477626 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.052e-13■□□□□ 9.6
PRPF39-203ENST00000477626 TEFQ10587 303 aa15.37■□□□□ 0.05
PRPF39-203ENST00000477626 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
PRPF39-203ENST00000477626 NBPF26B4DH59 902 aa15.37■□□□□ 0.05
PRPF39-203ENST00000477626 POLA2Q14181 598 aa15.37■□□□□ 0.05
PRPF39-203ENST00000477626 NBPF14Q5TI25 921 aa15.37■□□□□ 0.05
PRPF39-203ENST00000477626 NBPF10Q6P3W6 841 aaKnown RBP15.37■□□□□ 0.05
PRPF39-203ENST00000477626 NBPF15Q8N660 670 aa15.37■□□□□ 0.05
PRPF39-203ENST00000477626 ERBB4Q15303 1308 aa15.36■□□□□ 0.05
PRPF39-203ENST00000477626 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
PRPF39-203ENST00000477626 ARAP2Q8WZ64 1704 aa15.36■□□□□ 0.05
PRPF39-203ENST00000477626 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
PRPF39-203ENST00000477626 DBF4Q9UBU7 674 aaPredicted RBP15.36■□□□□ 0.05
PRPF39-203ENST00000477626 C1orf115Q9H7X2 142 aa15.35■□□□□ 0.05
PRPF39-203ENST00000477626 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
PRPF39-203ENST00000477626 CASP7P55210 303 aa15.35■□□□□ 0.05
PRPF39-203ENST00000477626 MTX1Q13505 466 aa15.35■□□□□ 0.05
PRPF39-203ENST00000477626 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
PRPF39-203ENST00000477626 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
PRPF39-203ENST00000477626 USP16Q9Y5T5 823 aa15.35■□□□□ 0.05
PRPF39-203ENST00000477626 CSB-PGBD3P0DP91 1061 aa15.34■□□□□ 0.05
PRPF39-203ENST00000477626 PIGBQ92521 554 aa15.34■□□□□ 0.05
PRPF39-203ENST00000477626 IGKV5-2P06315 115 aa15.34■□□□□ 0.05
PRPF39-203ENST00000477626 ATG3Q9NT62 314 aa15.34■□□□□ 0.05
PRPF39-203ENST00000477626 VPS72Q15906 364 aa15.33■□□□□ 0.05
PRPF39-203ENST00000477626 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.05
PRPF39-203ENST00000477626 ONECUT3O60422 494 aaPredicted RBP15.33■□□□□ 0.04
PRPF39-203ENST00000477626 RPAP2Q8IXW5 612 aaPredicted RBP15.33■□□□□ 0.04
PRPF39-203ENST00000477626 GCC1Q96CN9 775 aa15.33■□□□□ 0.04
PRPF39-203ENST00000477626 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
PRPF39-203ENST00000477626 SNRPA1P09661 255 aaKnown RBP15.32■□□□□ 0.04
PRPF39-203ENST00000477626 UBR3Q6ZT12 1888 aa15.32■□□□□ 0.04
PRPF39-203ENST00000477626 KSR2Q6VAB6 950 aa15.32■□□□□ 0.04
PRPF39-203ENST00000477626 MARCH10Q8NA82 808 aaPredicted RBP15.31■□□□□ 0.04
PRPF39-203ENST00000477626 CDCA7Q9BWT1 371 aaPredicted RBP15.31■□□□□ 0.04
PRPF39-203ENST00000477626 STRN4Q9NRL3 753 aa15.31■□□□□ 0.04
PRPF39-203ENST00000477626 TNS1Q9HBL0 1735 aaKnown RBP15.31■□□□□ 0.04
PRPF39-203ENST00000477626 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
PRPF39-203ENST00000477626 FMNL2Q96PY5 1086 aa15.31■□□□□ 0.04
PRPF39-203ENST00000477626 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
PRPF39-203ENST00000477626 COL4A1P02462 1669 aa15.31■□□□□ 0.04
PRPF39-203ENST00000477626 ANXA1P04083 346 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 UNC5CLQ8IV45 518 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 STK31Q9BXU1 1019 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 PI4KAP2A4QPH2 592 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 HSPA1LP34931 641 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 PI4KAP1Q8N8J0 262 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 CHD1LQ86WJ1 897 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
PRPF39-203ENST00000477626 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
PRPF39-203ENST00000477626 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
PRPF39-203ENST00000477626 NBPF7P0C2Y1 421 aaPredicted RBP15.29■□□□□ 0.04
PRPF39-203ENST00000477626 CABP4P57796 275 aa15.29■□□□□ 0.04
PRPF39-203ENST00000477626 ATP8B2P98198 1209 aa15.29■□□□□ 0.04
PRPF39-203ENST00000477626 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
PRPF39-203ENST00000477626 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
PRPF39-203ENST00000477626 OSBPL3Q9H4L5 887 aa15.27■□□□□ 0.04
PRPF39-203ENST00000477626 MSH5O43196 834 aa15.27■□□□□ 0.04
PRPF39-203ENST00000477626 FAM161AQ3B820 660 aa15.27■□□□□ 0.04
PRPF39-203ENST00000477626 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.04
PRPF39-203ENST00000477626 ASAP1Q9ULH1 1129 aa15.27■□□□□ 0.04
PRPF39-203ENST00000477626 SEC24BO95487 1268 aa15.27■□□□□ 0.03
PRPF39-203ENST00000477626 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.03
PRPF39-203ENST00000477626 NOP58Q9Y2X3 529 aaKnown RBP15.26■□□□□ 0.03
PRPF39-203ENST00000477626 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
PRPF39-203ENST00000477626 EVA1CP58658 441 aa15.26■□□□□ 0.03
PRPF39-203ENST00000477626 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
PRPF39-203ENST00000477626 GSPT1P15170 499 aaKnown RBP15.25■□□□□ 0.03
PRPF39-203ENST00000477626 PLEKHM2Q8IWE5 1019 aa15.25■□□□□ 0.03
PRPF39-203ENST00000477626 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
PRPF39-203ENST00000477626 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
PRPF39-203ENST00000477626 RABL6Q3YEC7 729 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms