RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
ACTN4-205ENST00000477174 CICQ96RK0 1608 aaPredicted RBP17.63■□□□□ 0.41
ACTN4-205ENST00000477174 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
ACTN4-205ENST00000477174 ZPR1O75312 459 aa17.63■□□□□ 0.41
ACTN4-205ENST00000477174 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
ACTN4-205ENST00000477174 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
ACTN4-205ENST00000477174 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
ACTN4-205ENST00000477174 TRIM35Q9UPQ4 493 aa17.63■□□□□ 0.41
ACTN4-205ENST00000477174 USP16Q9Y5T5 823 aa17.63■□□□□ 0.41
ACTN4-205ENST00000477174 COL5A3P25940 1745 aaPredicted RBP17.63■□□□□ 0.41
ACTN4-205ENST00000477174 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
ACTN4-205ENST00000477174 MYH14Q7Z406 1995 aaKnown RBP17.62■□□□□ 0.41
ACTN4-205ENST00000477174 SIPA1L3O60292 1781 aaPredicted RBP17.62■□□□□ 0.41
ACTN4-205ENST00000477174 A0A087WZG4 1122 aa17.62■□□□□ 0.41
ACTN4-205ENST00000477174 IL6STP40189 918 aaPredicted RBP17.62■□□□□ 0.41
ACTN4-205ENST00000477174 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
ACTN4-205ENST00000477174 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
ACTN4-205ENST00000477174 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
ACTN4-205ENST00000477174 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
ACTN4-205ENST00000477174 APAF1O14727 1248 aa17.61■□□□□ 0.41
ACTN4-205ENST00000477174 MMP10P09238 476 aa17.61■□□□□ 0.41
ACTN4-205ENST00000477174 EIF4A1P60842 406 aaKnown RBP17.61■□□□□ 0.41
ACTN4-205ENST00000477174 NARFQ9UHQ1 456 aa17.61■□□□□ 0.41
ACTN4-205ENST00000477174 TJP1Q07157 1748 aa17.61■□□□□ 0.41
ACTN4-205ENST00000477174 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
ACTN4-205ENST00000477174 A1BGP04217 495 aa17.6■□□□□ 0.41
ACTN4-205ENST00000477174 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
ACTN4-205ENST00000477174 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
ACTN4-205ENST00000477174 SRP68Q9UHB9 627 aaKnown RBP17.6■□□□□ 0.41
ACTN4-205ENST00000477174 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
ACTN4-205ENST00000477174 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
ACTN4-205ENST00000477174 COL15A1P39059 1388 aa17.58■□□□□ 0.4
ACTN4-205ENST00000477174 CHL1O00533 1208 aa17.58■□□□□ 0.4
ACTN4-205ENST00000477174 FKBP8Q14318 412 aa17.58■□□□□ 0.4
ACTN4-205ENST00000477174 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
ACTN4-205ENST00000477174 TM4SF1P30408 202 aa17.57■□□□□ 0.4
ACTN4-205ENST00000477174 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
ACTN4-205ENST00000477174 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
ACTN4-205ENST00000477174 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
ACTN4-205ENST00000477174 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
ACTN4-205ENST00000477174 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
ACTN4-205ENST00000477174 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
ACTN4-205ENST00000477174 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
ACTN4-205ENST00000477174 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
ACTN4-205ENST00000477174 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
ACTN4-205ENST00000477174 NLGN2Q8NFZ4 835 aa17.54■□□□□ 0.4
ACTN4-205ENST00000477174 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
ACTN4-205ENST00000477174 TBC1D2BQ9UPU7 963 aa17.54■□□□□ 0.4
ACTN4-205ENST00000477174 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
ACTN4-205ENST00000477174 TGFB2P61812 414 aa17.52■□□□□ 0.4
ACTN4-205ENST00000477174 DDR1Q08345 913 aa17.52■□□□□ 0.4
ACTN4-205ENST00000477174 NFIXQ14938 502 aa17.52■□□□□ 0.4
ACTN4-205ENST00000477174 CCDC27Q2M243 656 aa17.52■□□□□ 0.4
ACTN4-205ENST00000477174 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
ACTN4-205ENST00000477174 POLRMTO00411 1230 aaKnown RBP17.51■□□□□ 0.39
ACTN4-205ENST00000477174 RGL2O15211 777 aa17.51■□□□□ 0.39
ACTN4-205ENST00000477174 CAMTA2O94983 1202 aa17.51■□□□□ 0.39
ACTN4-205ENST00000477174 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
ACTN4-205ENST00000477174 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
ACTN4-205ENST00000477174 GPR162Q16538 588 aa17.51■□□□□ 0.39
ACTN4-205ENST00000477174 CLEC4GQ6UXB4 293 aa17.51■□□□□ 0.39
ACTN4-205ENST00000477174 IFT57Q9NWB7 429 aa17.51■□□□□ 0.39
ACTN4-205ENST00000477174 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
ACTN4-205ENST00000477174 GNAI1P63096 354 aa17.5■□□□□ 0.39
ACTN4-205ENST00000477174 MBIPQ9NS73 344 aa17.49■□□□□ 0.39
ACTN4-205ENST00000477174 SERPINB2P05120 415 aa17.48■□□□□ 0.39
ACTN4-205ENST00000477174 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
ACTN4-205ENST00000477174 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
ACTN4-205ENST00000477174 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
ACTN4-205ENST00000477174 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
ACTN4-205ENST00000477174 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
ACTN4-205ENST00000477174 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
ACTN4-205ENST00000477174 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
ACTN4-205ENST00000477174 HOXB7P09629 217 aa17.47■□□□□ 0.39
ACTN4-205ENST00000477174 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
ACTN4-205ENST00000477174 BICDL1Q6ZP65 573 aa17.47■□□□□ 0.39
ACTN4-205ENST00000477174 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
ACTN4-205ENST00000477174 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
ACTN4-205ENST00000477174 ERVV-1B6SEH8 477 aa17.46■□□□□ 0.39
ACTN4-205ENST00000477174 MYL6BP14649 208 aa17.46■□□□□ 0.39
ACTN4-205ENST00000477174 PDIA6Q15084 440 aa17.46■□□□□ 0.39
ACTN4-205ENST00000477174 PELP1Q8IZL8 1130 aaKnown RBP17.46■□□□□ 0.39
ACTN4-205ENST00000477174 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
ACTN4-205ENST00000477174 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
ACTN4-205ENST00000477174 A0A0G2JLW4 131 aa17.45■□□□□ 0.38
ACTN4-205ENST00000477174 KRT24Q2M2I5 525 aa17.45■□□□□ 0.38
ACTN4-205ENST00000477174 UTRNP46939 3433 aa17.45■□□□□ 0.38
ACTN4-205ENST00000477174 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
ACTN4-205ENST00000477174 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
ACTN4-205ENST00000477174 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
ACTN4-205ENST00000477174 IL16Q14005 1332 aa17.44■□□□□ 0.38
ACTN4-205ENST00000477174 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
ACTN4-205ENST00000477174 DPEP1P16444 411 aa17.43■□□□□ 0.38
ACTN4-205ENST00000477174 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
ACTN4-205ENST00000477174 LRP10Q7Z4F1 713 aa17.43■□□□□ 0.38
ACTN4-205ENST00000477174 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
ACTN4-205ENST00000477174 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
ACTN4-205ENST00000477174 MAP3K15Q6ZN16 1313 aa17.43■□□□□ 0.38
ACTN4-205ENST00000477174 CARMIL3Q8ND23 1372 aa17.42■□□□□ 0.38
ACTN4-205ENST00000477174 HLFQ16534 295 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms