RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.2
PRKD3-209ENST00000477132 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
PRKD3-209ENST00000477132 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
PRKD3-209ENST00000477132 NEFMP07197 916 aa16.26■□□□□ 0.19
PRKD3-209ENST00000477132 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
PRKD3-209ENST00000477132 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
PRKD3-209ENST00000477132 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
PRKD3-209ENST00000477132 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
PRKD3-209ENST00000477132 CCDC87Q9NVE4 849 aa16.25■□□□□ 0.19
PRKD3-209ENST00000477132 ADAMTS8Q9UP79 889 aa16.25■□□□□ 0.19
PRKD3-209ENST00000477132 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
PRKD3-209ENST00000477132 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
PRKD3-209ENST00000477132 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
PRKD3-209ENST00000477132 PNNQ9H307 717 aaKnown RBP16.24■□□□□ 0.19
PRKD3-209ENST00000477132 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
PRKD3-209ENST00000477132 TMPOP42166 694 aaKnown RBP16.23■□□□□ 0.19
PRKD3-209ENST00000477132 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRKD3-209ENST00000477132 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
PRKD3-209ENST00000477132 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
PRKD3-209ENST00000477132 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
PRKD3-209ENST00000477132 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
PRKD3-209ENST00000477132 KIF13BQ9NQT8 1826 aa16.23■□□□□ 0.19
PRKD3-209ENST00000477132 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
PRKD3-209ENST00000477132 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
PRKD3-209ENST00000477132 SCN7AQ01118 1682 aa16.22■□□□□ 0.19
PRKD3-209ENST00000477132 GYS1P13807 737 aa16.22■□□□□ 0.19
PRKD3-209ENST00000477132 RFC4P35249 363 aa16.22■□□□□ 0.19
PRKD3-209ENST00000477132 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
PRKD3-209ENST00000477132 COL15A1P39059 1388 aa16.22■□□□□ 0.19
PRKD3-209ENST00000477132 RIPK4P57078 832 aa16.21■□□□□ 0.19
PRKD3-209ENST00000477132 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
PRKD3-209ENST00000477132 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
PRKD3-209ENST00000477132 MMP10P09238 476 aa16.2■□□□□ 0.18
PRKD3-209ENST00000477132 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
PRKD3-209ENST00000477132 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
PRKD3-209ENST00000477132 USP16Q9Y5T5 823 aa16.19■□□□□ 0.18
PRKD3-209ENST00000477132 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
PRKD3-209ENST00000477132 STARD3NLO95772 234 aa16.18■□□□□ 0.18
PRKD3-209ENST00000477132 A1BGP04217 495 aa16.18■□□□□ 0.18
PRKD3-209ENST00000477132 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
PRKD3-209ENST00000477132 FKBP8Q14318 412 aa16.18■□□□□ 0.18
PRKD3-209ENST00000477132 N4BP2Q86UW6 1770 aaPredicted RBP16.18■□□□□ 0.18
PRKD3-209ENST00000477132 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
PRKD3-209ENST00000477132 NEUROD2Q15784 382 aa16.17■□□□□ 0.18
PRKD3-209ENST00000477132 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
PRKD3-209ENST00000477132 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
PRKD3-209ENST00000477132 TEX13AQ9BXU3 409 aaPredicted RBP16.17■□□□□ 0.18
PRKD3-209ENST00000477132 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
PRKD3-209ENST00000477132 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
PRKD3-209ENST00000477132 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
PRKD3-209ENST00000477132 ANP32CO43423 234 aa16.16■□□□□ 0.18
PRKD3-209ENST00000477132 SNRPA1P09661 255 aaKnown RBP16.16■□□□□ 0.18
PRKD3-209ENST00000477132 DDR1Q08345 913 aa16.16■□□□□ 0.18
PRKD3-209ENST00000477132 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
PRKD3-209ENST00000477132 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
PRKD3-209ENST00000477132 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
PRKD3-209ENST00000477132 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
PRKD3-209ENST00000477132 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
PRKD3-209ENST00000477132 CD2APQ9Y5K6 639 aa16.15■□□□□ 0.18
PRKD3-209ENST00000477132 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
PRKD3-209ENST00000477132 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
PRKD3-209ENST00000477132 ZNF330Q9Y3S2 320 aaPredicted RBP16.14■□□□□ 0.17
PRKD3-209ENST00000477132 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
PRKD3-209ENST00000477132 ZPR1O75312 459 aa16.13■□□□□ 0.17
PRKD3-209ENST00000477132 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
PRKD3-209ENST00000477132 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
PRKD3-209ENST00000477132 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
PRKD3-209ENST00000477132 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
PRKD3-209ENST00000477132 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
PRKD3-209ENST00000477132 CHD4Q14839 1912 aa16.13■□□□□ 0.17
PRKD3-209ENST00000477132 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
PRKD3-209ENST00000477132 APAF1O14727 1248 aa16.12■□□□□ 0.17
PRKD3-209ENST00000477132 TM4SF1P30408 202 aa16.12■□□□□ 0.17
PRKD3-209ENST00000477132 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
PRKD3-209ENST00000477132 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
PRKD3-209ENST00000477132 UTRNP46939 3433 aa16.12■□□□□ 0.17
PRKD3-209ENST00000477132 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRKD3-209ENST00000477132 NFIXQ14938 502 aa16.11■□□□□ 0.17
PRKD3-209ENST00000477132 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
PRKD3-209ENST00000477132 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
PRKD3-209ENST00000477132 ANKRD31Q8N7Z5 1873 aa16.1■□□□□ 0.17
PRKD3-209ENST00000477132 SENP3-EIF4A1A0A087X0R7 540 aa16.1■□□□□ 0.17
PRKD3-209ENST00000477132 PELP1Q8IZL8 1130 aaKnown RBP16.1■□□□□ 0.17
PRKD3-209ENST00000477132 WWC3Q9ULE0 1092 aa16.1■□□□□ 0.17
PRKD3-209ENST00000477132 A0A087WZG4 1122 aa16.09■□□□□ 0.17
PRKD3-209ENST00000477132 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
PRKD3-209ENST00000477132 GPR162Q16538 588 aa16.09■□□□□ 0.17
PRKD3-209ENST00000477132 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.17
PRKD3-209ENST00000477132 NUP98P52948 1817 aa16.08■□□□□ 0.17
PRKD3-209ENST00000477132 CHL1O00533 1208 aa16.08■□□□□ 0.16
PRKD3-209ENST00000477132 KRT24Q2M2I5 525 aa16.08■□□□□ 0.16
PRKD3-209ENST00000477132 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
PRKD3-209ENST00000477132 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
PRKD3-209ENST00000477132 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
PRKD3-209ENST00000477132 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
PRKD3-209ENST00000477132 LAS1LQ9Y4W2 734 aaKnown RBP16.07■□□□□ 0.16
PRKD3-209ENST00000477132 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
PRKD3-209ENST00000477132 COL11A2P13942 1736 aaPredicted RBP16.06■□□□□ 0.16
PRKD3-209ENST00000477132 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
PRKD3-209ENST00000477132 SERPINB2P05120 415 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms