RNA–Protein interactions for RNA: ENST00000475730.5

TNFRSF25-212, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 3

Gene TNFRSF25, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-212ENST00000475730 COL24A1Q17RW2 1714 aa17.21■□□□□ 0.35
TNFRSF25-212ENST00000475730 STARD3NLO95772 234 aa17.2■□□□□ 0.34
TNFRSF25-212ENST00000475730 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
TNFRSF25-212ENST00000475730 TEX13AQ9BXU3 409 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF25-212ENST00000475730 RFC4P35249 363 aa17.18■□□□□ 0.34
TNFRSF25-212ENST00000475730 NLGN2Q8NFZ4 835 aa17.18■□□□□ 0.34
TNFRSF25-212ENST00000475730 MIS18AQ9NYP9 233 aa17.18■□□□□ 0.34
TNFRSF25-212ENST00000475730 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
TNFRSF25-212ENST00000475730 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
TNFRSF25-212ENST00000475730 KDM3BQ7LBC6 1761 aa17.17■□□□□ 0.34
TNFRSF25-212ENST00000475730 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF25-212ENST00000475730 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
TNFRSF25-212ENST00000475730 C4AP0C0L4 1744 aa17.16■□□□□ 0.34
TNFRSF25-212ENST00000475730 APAF1O14727 1248 aa17.15■□□□□ 0.34
TNFRSF25-212ENST00000475730 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
TNFRSF25-212ENST00000475730 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
TNFRSF25-212ENST00000475730 COL15A1P39059 1388 aa17.15■□□□□ 0.34
TNFRSF25-212ENST00000475730 MMP10P09238 476 aa17.14■□□□□ 0.33
TNFRSF25-212ENST00000475730 GYS1P13807 737 aa17.14■□□□□ 0.33
TNFRSF25-212ENST00000475730 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
TNFRSF25-212ENST00000475730 NLGN1Q8N2Q7 840 aa17.14■□□□□ 0.33
TNFRSF25-212ENST00000475730 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
TNFRSF25-212ENST00000475730 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
TNFRSF25-212ENST00000475730 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
TNFRSF25-212ENST00000475730 GPR162Q16538 588 aa17.13■□□□□ 0.33
TNFRSF25-212ENST00000475730 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
TNFRSF25-212ENST00000475730 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
TNFRSF25-212ENST00000475730 EIF4A1P60842 406 aaKnown RBP17.12■□□□□ 0.33
TNFRSF25-212ENST00000475730 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
TNFRSF25-212ENST00000475730 USP16Q9Y5T5 823 aa17.12■□□□□ 0.33
TNFRSF25-212ENST00000475730 ZPR1O75312 459 aa17.11■□□□□ 0.33
TNFRSF25-212ENST00000475730 A1BGP04217 495 aa17.11■□□□□ 0.33
TNFRSF25-212ENST00000475730 YY1P25490 414 aa17.11■□□□□ 0.33
TNFRSF25-212ENST00000475730 A0A087WZG4 1122 aa17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 EIF5P55010 431 aaKnown RBP17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
TNFRSF25-212ENST00000475730 GIGYF1O75420 1035 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF25-212ENST00000475730 FKBP8Q14318 412 aa17.09■□□□□ 0.33
TNFRSF25-212ENST00000475730 USPL1Q5W0Q7 1092 aa17.09■□□□□ 0.33
TNFRSF25-212ENST00000475730 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
TNFRSF25-212ENST00000475730 CALD1Q05682 793 aaKnown RBP17.08■□□□□ 0.32
TNFRSF25-212ENST00000475730 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
TNFRSF25-212ENST00000475730 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
TNFRSF25-212ENST00000475730 CHL1O00533 1208 aa17.07■□□□□ 0.32
TNFRSF25-212ENST00000475730 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF25-212ENST00000475730 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
TNFRSF25-212ENST00000475730 YBX3P16989 372 aaKnown RBP eCLIP17.06■□□□□ 0.32
TNFRSF25-212ENST00000475730 CFAP44Q96MT7 982 aa17.06■□□□□ 0.32
TNFRSF25-212ENST00000475730 SCN7AQ01118 1682 aa17.05■□□□□ 0.32
TNFRSF25-212ENST00000475730 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
TNFRSF25-212ENST00000475730 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 DDR1Q08345 913 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 CCDC27Q2M243 656 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
TNFRSF25-212ENST00000475730 TM4SF1P30408 202 aa17.03■□□□□ 0.32
TNFRSF25-212ENST00000475730 GNAI1P63096 354 aa17.03■□□□□ 0.32
TNFRSF25-212ENST00000475730 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
TNFRSF25-212ENST00000475730 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
TNFRSF25-212ENST00000475730 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
TNFRSF25-212ENST00000475730 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
TNFRSF25-212ENST00000475730 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
TNFRSF25-212ENST00000475730 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
TNFRSF25-212ENST00000475730 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 POLRMTO00411 1230 aaKnown RBP17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 NFIXQ14938 502 aa17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 BICDL1Q6ZP65 573 aa17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
TNFRSF25-212ENST00000475730 BCORQ6W2J9 1755 aa17■□□□□ 0.31
TNFRSF25-212ENST00000475730 CCER2I3L3R5 266 aa17■□□□□ 0.31
TNFRSF25-212ENST00000475730 MYL6BP14649 208 aa17■□□□□ 0.31
TNFRSF25-212ENST00000475730 TGFB2P61812 414 aa17■□□□□ 0.31
TNFRSF25-212ENST00000475730 HOXB7P09629 217 aa16.99■□□□□ 0.31
TNFRSF25-212ENST00000475730 DPEP1P16444 411 aa16.99■□□□□ 0.31
TNFRSF25-212ENST00000475730 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
TNFRSF25-212ENST00000475730 ZNF652Q9Y2D9 606 aa16.99■□□□□ 0.31
TNFRSF25-212ENST00000475730 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF25-212ENST00000475730 SERPINB2P05120 415 aa16.98■□□□□ 0.31
TNFRSF25-212ENST00000475730 TBC1D9BQ66K14 1250 aa16.98■□□□□ 0.31
TNFRSF25-212ENST00000475730 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
TNFRSF25-212ENST00000475730 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
TNFRSF25-212ENST00000475730 IL16Q14005 1332 aa16.97■□□□□ 0.31
TNFRSF25-212ENST00000475730 RGL2O15211 777 aa16.97■□□□□ 0.31
TNFRSF25-212ENST00000475730 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
TNFRSF25-212ENST00000475730 CLEC4GQ6UXB4 293 aa16.97■□□□□ 0.31
TNFRSF25-212ENST00000475730 KIF6Q6ZMV9 814 aa16.97■□□□□ 0.31
TNFRSF25-212ENST00000475730 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
TNFRSF25-212ENST00000475730 KIF13BQ9NQT8 1826 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms