RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
TRAIP-205ENST00000475495 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
TRAIP-205ENST00000475495 AK7Q96M32 723 aa13.2□□□□□ -0.3
TRAIP-205ENST00000475495 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
TRAIP-205ENST00000475495 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
TRAIP-205ENST00000475495 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
TRAIP-205ENST00000475495 TJP1Q07157 1748 aa13.19□□□□□ -0.3
TRAIP-205ENST00000475495 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
TRAIP-205ENST00000475495 TUBGCP6Q96RT7 1819 aa13.19□□□□□ -0.3
TRAIP-205ENST00000475495 KCNQ3O43525 872 aa13.19□□□□□ -0.3
TRAIP-205ENST00000475495 FKBP8Q14318 412 aa13.19□□□□□ -0.3
TRAIP-205ENST00000475495 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
TRAIP-205ENST00000475495 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 CHL1O00533 1208 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 ABCB7O75027 752 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 STARD3NLO95772 234 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
TRAIP-205ENST00000475495 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 DNAJC10Q8IXB1 793 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
TRAIP-205ENST00000475495 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
TRAIP-205ENST00000475495 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
TRAIP-205ENST00000475495 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
TRAIP-205ENST00000475495 EIF4A1P60842 406 aaKnown RBP13.17□□□□□ -0.3
TRAIP-205ENST00000475495 GNAI1P63096 354 aa13.17□□□□□ -0.3
TRAIP-205ENST00000475495 IFT57Q9NWB7 429 aa13.17□□□□□ -0.3
TRAIP-205ENST00000475495 GNPATO15228 680 aa13.16□□□□□ -0.3
TRAIP-205ENST00000475495 ZNF853P0CG23 659 aa13.16□□□□□ -0.3
TRAIP-205ENST00000475495 SSFA2P28290 1259 aa13.16□□□□□ -0.3
TRAIP-205ENST00000475495 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
TRAIP-205ENST00000475495 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
TRAIP-205ENST00000475495 CCDC87Q9NVE4 849 aa13.16□□□□□ -0.3
TRAIP-205ENST00000475495 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
TRAIP-205ENST00000475495 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
TRAIP-205ENST00000475495 IL16Q14005 1332 aa13.15□□□□□ -0.3
TRAIP-205ENST00000475495 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
TRAIP-205ENST00000475495 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
TRAIP-205ENST00000475495 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
TRAIP-205ENST00000475495 CASZ1Q86V15 1759 aa13.15□□□□□ -0.31
TRAIP-205ENST00000475495 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
TRAIP-205ENST00000475495 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
TRAIP-205ENST00000475495 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
TRAIP-205ENST00000475495 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
TRAIP-205ENST00000475495 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
TRAIP-205ENST00000475495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
TRAIP-205ENST00000475495 PHF14O94880 888 aa13.13□□□□□ -0.31
TRAIP-205ENST00000475495 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
TRAIP-205ENST00000475495 COL23A1Q86Y22 540 aaPredicted RBP13.13□□□□□ -0.31
TRAIP-205ENST00000475495 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
TRAIP-205ENST00000475495 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
TRAIP-205ENST00000475495 HOXB7P09629 217 aa13.11□□□□□ -0.31
TRAIP-205ENST00000475495 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
TRAIP-205ENST00000475495 RFC4P35249 363 aa13.11□□□□□ -0.31
TRAIP-205ENST00000475495 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
TRAIP-205ENST00000475495 PDGFDQ9GZP0 370 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-205ENST00000475495 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
TRAIP-205ENST00000475495 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
TRAIP-205ENST00000475495 ZBTB1Q9Y2K1 713 aa13.11□□□□□ -0.31
TRAIP-205ENST00000475495 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
TRAIP-205ENST00000475495 A0A087WZG4 1122 aa13.1□□□□□ -0.31
TRAIP-205ENST00000475495 A1BGP04217 495 aa13.1□□□□□ -0.31
TRAIP-205ENST00000475495 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-205ENST00000475495 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
TRAIP-205ENST00000475495 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
TRAIP-205ENST00000475495 CHMP4AQ9BY43 222 aa13.1□□□□□ -0.31
TRAIP-205ENST00000475495 ZNF521Q96K83 1311 aa13.1□□□□□ -0.31
TRAIP-205ENST00000475495 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
TRAIP-205ENST00000475495 C4AP0C0L4 1744 aa13.09□□□□□ -0.31
TRAIP-205ENST00000475495 EIF5P55010 431 aaKnown RBP13.09□□□□□ -0.31
TRAIP-205ENST00000475495 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
TRAIP-205ENST00000475495 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
TRAIP-205ENST00000475495 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
TRAIP-205ENST00000475495 COL15A1P39059 1388 aa13.08□□□□□ -0.31
TRAIP-205ENST00000475495 ZPR1O75312 459 aa13.08□□□□□ -0.32
TRAIP-205ENST00000475495 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
TRAIP-205ENST00000475495 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
TRAIP-205ENST00000475495 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.32
TRAIP-205ENST00000475495 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
TRAIP-205ENST00000475495 CACNA1FO60840 1977 aa13.08□□□□□ -0.32
TRAIP-205ENST00000475495 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
TRAIP-205ENST00000475495 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
TRAIP-205ENST00000475495 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-205ENST00000475495 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-205ENST00000475495 NBPF26B4DH59 902 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 E9PSI1 815 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 POLD1P28340 1107 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 NBPF10Q6P3W6 841 aaKnown RBP13.06□□□□□ -0.32
TRAIP-205ENST00000475495 NLGN1Q8N2Q7 840 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 NBPF15Q8N660 670 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 NARFQ9UHQ1 456 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 USP42Q9H9J4 1324 aaKnown RBP13.06□□□□□ -0.32
TRAIP-205ENST00000475495 FANCIQ9NVI1 1328 aa13.06□□□□□ -0.32
TRAIP-205ENST00000475495 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
TRAIP-205ENST00000475495 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
TRAIP-205ENST00000475495 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
TRAIP-205ENST00000475495 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
TRAIP-205ENST00000475495 ARXQ96QS3 562 aa13.05□□□□□ -0.32
TRAIP-205ENST00000475495 GYS1P13807 737 aa13.04□□□□□ -0.32
TRAIP-205ENST00000475495 DZIP3Q86Y13 1208 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms