RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 NLGN1Q8N2Q7 840 aa15.26■□□□□ 0.03
HLA-DOB-208ENST00000475235 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
HLA-DOB-208ENST00000475235 CD2APQ9Y5K6 639 aa15.26■□□□□ 0.03
HLA-DOB-208ENST00000475235 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
HLA-DOB-208ENST00000475235 HTATSF1O43719 755 aaKnown RBP15.25■□□□□ 0.03
HLA-DOB-208ENST00000475235 DNAJC10Q8IXB1 793 aa15.25■□□□□ 0.03
HLA-DOB-208ENST00000475235 ZNF790Q6PG37 636 aa15.24■□□□□ 0.03
HLA-DOB-208ENST00000475235 CCDC87Q9NVE4 849 aa15.24■□□□□ 0.03
HLA-DOB-208ENST00000475235 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOB-208ENST00000475235 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
HLA-DOB-208ENST00000475235 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
HLA-DOB-208ENST00000475235 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 GPR162Q16538 588 aa15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 NLGN2Q8NFZ4 835 aa15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 TEX13AQ9BXU3 409 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 STARD3NLO95772 234 aa15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 MMP10P09238 476 aa15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 FMNL2Q96PY5 1086 aa15.22■□□□□ 0.03
HLA-DOB-208ENST00000475235 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.03
HLA-DOB-208ENST00000475235 GYS1P13807 737 aa15.21■□□□□ 0.03
HLA-DOB-208ENST00000475235 YY1P25490 414 aa15.21■□□□□ 0.03
HLA-DOB-208ENST00000475235 TJP1Q07157 1748 aa15.21■□□□□ 0.03
HLA-DOB-208ENST00000475235 ZNF496Q96IT1 587 aaPredicted RBP15.21■□□□□ 0.03
HLA-DOB-208ENST00000475235 USP42Q9H9J4 1324 aaKnown RBP15.21■□□□□ 0.02
HLA-DOB-208ENST00000475235 HEG1Q9ULI3 1381 aa15.2■□□□□ 0.02
HLA-DOB-208ENST00000475235 TAF7LQ5H9L4 462 aa15.2■□□□□ 0.02
HLA-DOB-208ENST00000475235 MCM10Q7L590 875 aa15.2■□□□□ 0.02
HLA-DOB-208ENST00000475235 PLEKHF1Q96S99 279 aa15.2■□□□□ 0.02
HLA-DOB-208ENST00000475235 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
HLA-DOB-208ENST00000475235 ZBTB1Q9Y2K1 713 aa15.19■□□□□ 0.02
HLA-DOB-208ENST00000475235 ZPR1O75312 459 aa15.18■□□□□ 0.02
HLA-DOB-208ENST00000475235 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOB-208ENST00000475235 PARP3Q9Y6F1 533 aa15.18■□□□□ 0.02
HLA-DOB-208ENST00000475235 GRIN3BO60391 1043 aa15.17■□□□□ 0.02
HLA-DOB-208ENST00000475235 NFE2L2Q16236 605 aa15.17■□□□□ 0.02
HLA-DOB-208ENST00000475235 COL15A1P39059 1388 aa15.17■□□□□ 0.02
HLA-DOB-208ENST00000475235 DCTN1Q14203 1278 aa15.17■□□□□ 0.02
HLA-DOB-208ENST00000475235 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOB-208ENST00000475235 SRP68Q9UHB9 627 aaKnown RBP15.17■□□□□ 0.02
HLA-DOB-208ENST00000475235 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
HLA-DOB-208ENST00000475235 A0A087WZG4 1122 aa15.16■□□□□ 0.02
HLA-DOB-208ENST00000475235 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
HLA-DOB-208ENST00000475235 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
HLA-DOB-208ENST00000475235 PRKRIP1Q9H875 184 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOB-208ENST00000475235 NARFQ9UHQ1 456 aa15.16■□□□□ 0.02
HLA-DOB-208ENST00000475235 FKBP8Q14318 412 aa15.15■□□□□ 0.02
HLA-DOB-208ENST00000475235 USPL1Q5W0Q7 1092 aa15.15■□□□□ 0.02
HLA-DOB-208ENST00000475235 KCNQ3O43525 872 aa15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 SNRPA1P09661 255 aaKnown RBP15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 EIF5P55010 431 aaKnown RBP15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 TGFB2P61812 414 aa15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 SIPA1L3O60292 1781 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOB-208ENST00000475235 MYH14Q7Z406 1995 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-208ENST00000475235 C10orf71Q711Q0 1435 aa15.13■□□□□ 0.01
HLA-DOB-208ENST00000475235 VIRMAQ69YN4 1812 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-208ENST00000475235 C4AP0C0L4 1744 aa15.13■□□□□ 0.01
HLA-DOB-208ENST00000475235 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
HLA-DOB-208ENST00000475235 LMOD3Q0VAK6 560 aa15.12■□□□□ 0.01
HLA-DOB-208ENST00000475235 CAPN15O75808 1086 aa15.12■□□□□ 0.01
HLA-DOB-208ENST00000475235 TM4SF1P30408 202 aa15.12■□□□□ 0.01
HLA-DOB-208ENST00000475235 UTRNP46939 3433 aa15.11■□□□□ 0.01
HLA-DOB-208ENST00000475235 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
HLA-DOB-208ENST00000475235 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
HLA-DOB-208ENST00000475235 RIPK4P57078 832 aa15.11■□□□□ 0.01
HLA-DOB-208ENST00000475235 DDR1Q08345 913 aa15.11■□□□□ 0.01
HLA-DOB-208ENST00000475235 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOB-208ENST00000475235 A1BGP04217 495 aa15.1■□□□□ 0.01
HLA-DOB-208ENST00000475235 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
HLA-DOB-208ENST00000475235 PXDNLA1KZ92 1463 aa15.1■□□□□ 0.01
HLA-DOB-208ENST00000475235 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
HLA-DOB-208ENST00000475235 NFIXQ14938 502 aa15.09■□□□□ 0.01
HLA-DOB-208ENST00000475235 RUNDC1Q96C34 613 aa15.09■□□□□ 0.01
HLA-DOB-208ENST00000475235 BCL2L12Q9HB09 334 aa15.09■□□□□ 0.01
HLA-DOB-208ENST00000475235 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0.01
HLA-DOB-208ENST00000475235 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0.01
HLA-DOB-208ENST00000475235 BABAM1Q9NWV8 329 aa15.08■□□□□ 0.01
HLA-DOB-208ENST00000475235 MIS18AQ9NYP9 233 aa15.08■□□□□ 0.01
HLA-DOB-208ENST00000475235 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 TBC1D2BQ9UPU7 963 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 A0A0G2JLW4 131 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 DPEP1P16444 411 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
HLA-DOB-208ENST00000475235 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
HLA-DOB-208ENST00000475235 CCDC146Q8IYE0 955 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 TSPYL4Q9UJ04 414 aa15.07■□□□□ 0
HLA-DOB-208ENST00000475235 GIGYF1O75420 1035 aaPredicted RBP15.06■□□□□ 0
HLA-DOB-208ENST00000475235 SERPINB2P05120 415 aa15.06■□□□□ 0
HLA-DOB-208ENST00000475235 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
HLA-DOB-208ENST00000475235 GOLGB1Q14789 3259 aaKnown RBP15.06■□□□□ 0
HLA-DOB-208ENST00000475235 RGL2O15211 777 aa15.05■□□□□ -0
HLA-DOB-208ENST00000475235 CAMTA2O94983 1202 aa15.05■□□□□ -0
HLA-DOB-208ENST00000475235 ZNF784Q8NCA9 323 aaPredicted RBP15.05■□□□□ -0
HLA-DOB-208ENST00000475235 WWC3Q9ULE0 1092 aa15.05■□□□□ -0
HLA-DOB-208ENST00000475235 BCS1LQ9Y276 419 aa15.05■□□□□ -0
HLA-DOB-208ENST00000475235 ZNF652Q9Y2D9 606 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms