RNA–Protein interactions for RNA: ENST00000475057.5

SUPT3H-205, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 1,377 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-205ENST00000475057 PTGDRQ13258 359 aa9.24□□□□□ -0.93
SUPT3H-205ENST00000475057 DDX12PQ92771 950 aa9.24□□□□□ -0.93
SUPT3H-205ENST00000475057 RRP7AQ9Y3A4 280 aaKnown RBP9.24□□□□□ -0.93
SUPT3H-205ENST00000475057 SOS2Q07890 1332 aaPredicted RBP9.24□□□□□ -0.93
SUPT3H-205ENST00000475057 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 XRN1Q8IZH2 1706 aaKnown RBP9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 RRP9O43818 475 aaKnown RBP9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 DDIT3P35638 169 aa9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 ATF7IPQ6VMQ6 1270 aa9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 TMUB1Q9BVT8 246 aa9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 METP08581 1390 aa9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 C1orf167Q5SNV9 1468 aa9.23□□□□□ -0.93
SUPT3H-205ENST00000475057 NALCNQ8IZF0 1738 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 TULP4Q9NRJ4 1543 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 COL3A1P02461 1466 aaPredicted RBP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 TBC1D12O60347 775 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 NUCB1Q02818 461 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 FOXD4L4Q8WXT5 416 aaPredicted RBP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 PLEKHF1Q96S99 279 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 RRAGDQ9NQL2 400 aaPredicted RBP9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 SMC4Q9NTJ3 1288 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 ZBTB40Q9NUA8 1239 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 TRAK1Q9UPV9 953 aa9.22□□□□□ -0.93
SUPT3H-205ENST00000475057 NRXN3Q9Y4C0 1643 aa9.21□□□□□ -0.93
SUPT3H-205ENST00000475057 CDC42BPGQ6DT37 1551 aa9.21□□□□□ -0.93
SUPT3H-205ENST00000475057 PPIP5K1Q6PFW1 1433 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 TERF1P54274 439 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 CALD1Q05682 793 aaKnown RBP9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 EXOSC9Q06265 439 aaKnown RBP9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 CLEC17AQ6ZS10 378 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 ARHGAP45Q92619 1136 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 ANP32BQ92688 251 aaKnown RBP9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 GCC1Q96CN9 775 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 TNNQ9UQP3 1299 aa9.21□□□□□ -0.94
SUPT3H-205ENST00000475057 IBTKQ9P2D0 1353 aaPredicted RBP9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 TRIM27P14373 513 aa9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 YY1P25490 414 aa9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 PTGER2P43116 358 aa9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 MDM2Q00987 491 aaPredicted RBP9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 XPCQ01831 940 aaPredicted RBP9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 BMP2KLQ5H9B9 411 aa9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 GLI3P10071 1580 aa9.2□□□□□ -0.94
SUPT3H-205ENST00000475057 KIF20BQ96Q89 1820 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 HSP90AA1P07900 732 aaKnown RBP9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 TPM2P07951 284 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 HS1BP3Q53T59 392 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 TRIM44Q96DX7 344 aaPredicted RBP9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 NEXMIFQ5QGS0 1516 aa9.19□□□□□ -0.94
SUPT3H-205ENST00000475057 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 COL22A1Q8NFW1 1626 aaPredicted RBP9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 TNNT2P45379 298 aaPredicted RBP9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 RAB3GAP1Q15042 981 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 CHD1LQ86WJ1 897 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 UNC5CLQ8IV45 518 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 BEGAINQ9BUH8 593 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 TERF2IPQ9NYB0 399 aa9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 NOB1Q9ULX3 412 aaKnown RBP9.18□□□□□ -0.94
SUPT3H-205ENST00000475057 ESPNB1AK53 854 aa9.17□□□□□ -0.94
SUPT3H-205ENST00000475057 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
SUPT3H-205ENST00000475057 EVX2Q03828 476 aa9.17□□□□□ -0.94
SUPT3H-205ENST00000475057 R3HDM1Q15032 1099 aaKnown RBP9.17□□□□□ -0.94
SUPT3H-205ENST00000475057 SNRKQ9NRH2 765 aa9.17□□□□□ -0.94
SUPT3H-205ENST00000475057 IGSF3O75054 1194 aa9.16□□□□□ -0.94
SUPT3H-205ENST00000475057 EN1Q05925 392 aaPredicted RBP9.16□□□□□ -0.94
SUPT3H-205ENST00000475057 CCDC173Q0VFZ6 552 aa9.16□□□□□ -0.94
SUPT3H-205ENST00000475057 TMEM57Q8N5G2 664 aa9.16□□□□□ -0.94
SUPT3H-205ENST00000475057 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
SUPT3H-205ENST00000475057 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.16□□□□□ -0.94
SUPT3H-205ENST00000475057 FOXO3O43524 673 aa9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 DIAPH1O60610 1272 aaKnown RBP9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 HSP90AB1P08238 724 aaKnown RBP9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 RIPK4P57078 832 aa9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 NUCB2P80303 420 aa9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 HSP90AA2PQ14568 343 aaPredicted RBP9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 ESCO1Q5FWF5 840 aa9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 FBXW7Q969H0 707 aa9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 MAP7D2Q96T17 732 aa9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 CWC22Q9HCG8 908 aaKnown RBP9.15□□□□□ -0.94
SUPT3H-205ENST00000475057 ZBTB7BO15156 539 aaPredicted RBP9.14□□□□□ -0.95
SUPT3H-205ENST00000475057 BAG6P46379 1132 aa9.14□□□□□ -0.95
SUPT3H-205ENST00000475057 TMEM132EQ6IEE7 984 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms