RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 SOS1Q07889 1333 aaPredicted RBP24.6■■□□□ 1.53
CCDC171-206ENST00000474193 TAF7Q15545 349 aaPredicted RBP24.59■■□□□ 1.53
CCDC171-206ENST00000474193 SRP68Q9UHB9 627 aaKnown RBP24.59■■□□□ 1.53
CCDC171-206ENST00000474193 TGFB2P61812 414 aa24.58■■□□□ 1.53
CCDC171-206ENST00000474193 ZBTB1Q9Y2K1 713 aa24.58■■□□□ 1.53
CCDC171-206ENST00000474193 NARFQ9UHQ1 456 aa24.57■■□□□ 1.52
CCDC171-206ENST00000474193 DCTN1Q14203 1278 aa24.56■■□□□ 1.52
CCDC171-206ENST00000474193 FKBP8Q14318 412 aa24.56■■□□□ 1.52
CCDC171-206ENST00000474193 NFE2L2Q16236 605 aa24.56■■□□□ 1.52
CCDC171-206ENST00000474193 USPL1Q5W0Q7 1092 aa24.56■■□□□ 1.52
CCDC171-206ENST00000474193 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
CCDC171-206ENST00000474193 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
CCDC171-206ENST00000474193 CHD4Q14839 1912 aa24.56■■□□□ 1.52
CCDC171-206ENST00000474193 COL15A1P39059 1388 aa24.55■■□□□ 1.52
CCDC171-206ENST00000474193 WDR43Q15061 677 aaKnown RBP eCLIP24.55■■□□□ 1.52
CCDC171-206ENST00000474193 PLEKHF1Q96S99 279 aa24.55■■□□□ 1.52
CCDC171-206ENST00000474193 ZNF330Q9Y3S2 320 aaPredicted RBP24.55■■□□□ 1.52
CCDC171-206ENST00000474193 UBR2Q8IWV8 1755 aa24.54■■□□□ 1.52
CCDC171-206ENST00000474193 SNRPA1P09661 255 aaKnown RBP24.54■■□□□ 1.52
CCDC171-206ENST00000474193 SIPA1L3O60292 1781 aaPredicted RBP24.53■■□□□ 1.52
CCDC171-206ENST00000474193 YBX3P16989 372 aaKnown RBP eCLIP24.53■■□□□ 1.52
CCDC171-206ENST00000474193 C4AP0C0L4 1744 aa24.52■■□□□ 1.52
CCDC171-206ENST00000474193 KCNQ3O43525 872 aa24.52■■□□□ 1.52
CCDC171-206ENST00000474193 IL6STP40189 918 aaPredicted RBP24.52■■□□□ 1.52
CCDC171-206ENST00000474193 EIF5P55010 431 aaKnown RBP24.52■■□□□ 1.52
CCDC171-206ENST00000474193 TM4SF1P30408 202 aa24.5■■□□□ 1.51
CCDC171-206ENST00000474193 LMOD3Q0VAK6 560 aa24.5■■□□□ 1.51
CCDC171-206ENST00000474193 A1BGP04217 495 aa24.49■■□□□ 1.51
CCDC171-206ENST00000474193 RIPK4P57078 832 aa24.49■■□□□ 1.51
CCDC171-206ENST00000474193 A0A0G2JLW4 131 aa24.48■■□□□ 1.51
CCDC171-206ENST00000474193 WWC3Q9ULE0 1092 aa24.48■■□□□ 1.51
CCDC171-206ENST00000474193 USP16Q9Y5T5 823 aa24.48■■□□□ 1.51
CCDC171-206ENST00000474193 POLRMTO00411 1230 aaKnown RBP24.46■■□□□ 1.51
CCDC171-206ENST00000474193 DDR1Q08345 913 aa24.46■■□□□ 1.51
CCDC171-206ENST00000474193 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
CCDC171-206ENST00000474193 C10orf71Q711Q0 1435 aa24.45■■□□□ 1.51
CCDC171-206ENST00000474193 NFIXQ14938 502 aa24.45■■□□□ 1.5
CCDC171-206ENST00000474193 ZNF784Q8NCA9 323 aaPredicted RBP24.45■■□□□ 1.5
CCDC171-206ENST00000474193 TBC1D2BQ9UPU7 963 aa24.45■■□□□ 1.5
CCDC171-206ENST00000474193 BCS1LQ9Y276 419 aa24.45■■□□□ 1.5
CCDC171-206ENST00000474193 SERPINB2P05120 415 aa24.44■■□□□ 1.5
CCDC171-206ENST00000474193 DPEP1P16444 411 aa24.44■■□□□ 1.5
CCDC171-206ENST00000474193 BICDL1Q6ZP65 573 aa24.44■■□□□ 1.5
CCDC171-206ENST00000474193 PIM2Q9P1W9 311 aa24.44■■□□□ 1.5
CCDC171-206ENST00000474193 DLG5Q8TDM6 1919 aa24.43■■□□□ 1.5
CCDC171-206ENST00000474193 TMPOP42166 694 aaKnown RBP24.43■■□□□ 1.5
CCDC171-206ENST00000474193 DZIP3Q86Y13 1208 aaKnown RBP24.43■■□□□ 1.5
CCDC171-206ENST00000474193 RUNDC1Q96C34 613 aa24.43■■□□□ 1.5
CCDC171-206ENST00000474193 NPHP1O15259 732 aa24.42■■□□□ 1.5
CCDC171-206ENST00000474193 BCL2L12Q9HB09 334 aa24.42■■□□□ 1.5
CCDC171-206ENST00000474193 KIF13BQ9NQT8 1826 aa24.42■■□□□ 1.5
CCDC171-206ENST00000474193 PXDNLA1KZ92 1463 aa24.41■■□□□ 1.5
CCDC171-206ENST00000474193 NEUROD2Q15784 382 aa24.41■■□□□ 1.5
CCDC171-206ENST00000474193 SETDB2Q96T68 719 aa24.41■■□□□ 1.5
CCDC171-206ENST00000474193 THUMPD2Q9BTF0 503 aaKnown RBP24.41■■□□□ 1.5
CCDC171-206ENST00000474193 ZNF652Q9Y2D9 606 aa24.41■■□□□ 1.5
CCDC171-206ENST00000474193 CCDC146Q8IYE0 955 aa24.4■■□□□ 1.5
CCDC171-206ENST00000474193 TSPYL4Q9UJ04 414 aa24.4■■□□□ 1.5
CCDC171-206ENST00000474193 PRAMEF22A3QJZ6 481 aa24.39■■□□□ 1.49
CCDC171-206ENST00000474193 BABAM1Q9NWV8 329 aa24.39■■□□□ 1.49
CCDC171-206ENST00000474193 ADAMTS8Q9UP79 889 aa24.39■■□□□ 1.49
CCDC171-206ENST00000474193 EIF4A1P60842 406 aaKnown RBP24.38■■□□□ 1.49
CCDC171-206ENST00000474193 DALRD3Q5D0E6 543 aaKnown RBP24.38■■□□□ 1.49
CCDC171-206ENST00000474193 N4BP2Q86UW6 1770 aaPredicted RBP24.37■■□□□ 1.49
CCDC171-206ENST00000474193 GIGYF1O75420 1035 aaPredicted RBP24.37■■□□□ 1.49
CCDC171-206ENST00000474193 PIP4K2AP48426 406 aaPredicted RBP24.37■■□□□ 1.49
CCDC171-206ENST00000474193 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
CCDC171-206ENST00000474193 CLEC4GQ6UXB4 293 aa24.37■■□□□ 1.49
CCDC171-206ENST00000474193 ARHGAP27Q6ZUM4 889 aa24.37■■□□□ 1.49
CCDC171-206ENST00000474193 MRS2Q9HD23 443 aa24.37■■□□□ 1.49
CCDC171-206ENST00000474193 CAMTA2O94983 1202 aa24.36■■□□□ 1.49
CCDC171-206ENST00000474193 PDZRN3Q9UPQ7 1066 aa24.36■■□□□ 1.49
CCDC171-206ENST00000474193 RRP7AQ9Y3A4 280 aaKnown RBP24.36■■□□□ 1.49
CCDC171-206ENST00000474193 CARMIL3Q8ND23 1372 aa24.35■■□□□ 1.49
CCDC171-206ENST00000474193 H0YIN7 160 aa24.35■■□□□ 1.49
CCDC171-206ENST00000474193 KCNA3P22001 575 aa24.34■■□□□ 1.49
CCDC171-206ENST00000474193 CHRNA5P30532 468 aa24.34■■□□□ 1.49
CCDC171-206ENST00000474193 UTRNP46939 3433 aa24.34■■□□□ 1.49
CCDC171-206ENST00000474193 RGL2O15211 777 aa24.33■■□□□ 1.49
CCDC171-206ENST00000474193 PDE6BP35913 854 aa24.33■■□□□ 1.49
CCDC171-206ENST00000474193 NBPF26B4DH59 902 aa24.32■■□□□ 1.48
CCDC171-206ENST00000474193 ST5P78524 1137 aa24.32■■□□□ 1.48
CCDC171-206ENST00000474193 NBPF10Q6P3W6 841 aaKnown RBP24.32■■□□□ 1.48
CCDC171-206ENST00000474193 NBPF15Q8N660 670 aa24.32■■□□□ 1.48
CCDC171-206ENST00000474193 C2CD5Q86YS7 1000 aa24.31■■□□□ 1.48
CCDC171-206ENST00000474193 NGEFQ8N5V2 710 aa24.31■■□□□ 1.48
CCDC171-206ENST00000474193 CNBD1Q8NA66 436 aa24.31■■□□□ 1.48
CCDC171-206ENST00000474193 BRIP1Q9BX63 1249 aa24.31■■□□□ 1.48
CCDC171-206ENST00000474193 LAS1LQ9Y4W2 734 aaKnown RBP24.31■■□□□ 1.48
CCDC171-206ENST00000474193 KDM3BQ7LBC6 1761 aa24.3■■□□□ 1.48
CCDC171-206ENST00000474193 KIF6Q6ZMV9 814 aa24.3■■□□□ 1.48
CCDC171-206ENST00000474193 AFDNP55196 1824 aaKnown RBP24.3■■□□□ 1.48
CCDC171-206ENST00000474193 NBPF5PQ86XG9 351 aaPredicted RBP24.29■■□□□ 1.48
CCDC171-206ENST00000474193 TTLL6Q8N841 843 aa24.29■■□□□ 1.48
CCDC171-206ENST00000474193 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
CCDC171-206ENST00000474193 GOLGB1Q14789 3259 aaKnown RBP24.28■■□□□ 1.48
CCDC171-206ENST00000474193 KIAA1551Q9HCM1 1747 aa24.28■■□□□ 1.48
CCDC171-206ENST00000474193 CCER2I3L3R5 266 aa24.28■■□□□ 1.48
CCDC171-206ENST00000474193 MYL6BP14649 208 aa24.28■■□□□ 1.48
CCDC171-206ENST00000474193 EIF2S2P20042 333 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms