RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
USF1-205ENST00000473969 MSL1Q68DK7 614 aa17.94■□□□□ 0.46
USF1-205ENST00000473969 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
USF1-205ENST00000473969 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
USF1-205ENST00000473969 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
USF1-205ENST00000473969 ZNF330Q9Y3S2 320 aaPredicted RBP17.93■□□□□ 0.46
USF1-205ENST00000473969 LRP5O75197 1615 aa17.93■□□□□ 0.46
USF1-205ENST00000473969 UBR2Q8IWV8 1755 aa17.92■□□□□ 0.46
USF1-205ENST00000473969 A0A087WZG4 1122 aa17.92■□□□□ 0.46
USF1-205ENST00000473969 ZPR1O75312 459 aa17.92■□□□□ 0.46
USF1-205ENST00000473969 ARXQ96QS3 562 aa17.92■□□□□ 0.46
USF1-205ENST00000473969 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
USF1-205ENST00000473969 TJP1Q07157 1748 aa17.92■□□□□ 0.46
USF1-205ENST00000473969 A1BGP04217 495 aa17.91■□□□□ 0.46
USF1-205ENST00000473969 PTGER2P43116 358 aa17.91■□□□□ 0.46
USF1-205ENST00000473969 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
USF1-205ENST00000473969 CFAP44Q96MT7 982 aa17.91■□□□□ 0.46
USF1-205ENST00000473969 COL5A3P25940 1745 aaPredicted RBP17.91■□□□□ 0.46
USF1-205ENST00000473969 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
USF1-205ENST00000473969 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
USF1-205ENST00000473969 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
USF1-205ENST00000473969 CHL1O00533 1208 aa17.9■□□□□ 0.46
USF1-205ENST00000473969 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
USF1-205ENST00000473969 GNAI1P63096 354 aa17.9■□□□□ 0.46
USF1-205ENST00000473969 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
USF1-205ENST00000473969 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
USF1-205ENST00000473969 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
USF1-205ENST00000473969 SOS1Q07889 1333 aaPredicted RBP17.9■□□□□ 0.46
USF1-205ENST00000473969 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
USF1-205ENST00000473969 PRAMEF22A3QJZ6 481 aa17.89■□□□□ 0.45
USF1-205ENST00000473969 IL6STP40189 918 aaPredicted RBP17.89■□□□□ 0.45
USF1-205ENST00000473969 KLHL34Q8N239 644 aa17.89■□□□□ 0.45
USF1-205ENST00000473969 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
USF1-205ENST00000473969 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
USF1-205ENST00000473969 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
USF1-205ENST00000473969 COL15A1P39059 1388 aa17.88■□□□□ 0.45
USF1-205ENST00000473969 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
USF1-205ENST00000473969 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
USF1-205ENST00000473969 GYS1P13807 737 aa17.86■□□□□ 0.45
USF1-205ENST00000473969 EIF2S2P20042 333 aaKnown RBP17.86■□□□□ 0.45
USF1-205ENST00000473969 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
USF1-205ENST00000473969 MIER1Q8N108 512 aa17.86■□□□□ 0.45
USF1-205ENST00000473969 SRP68Q9UHB9 627 aaKnown RBP17.86■□□□□ 0.45
USF1-205ENST00000473969 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
USF1-205ENST00000473969 USP42Q9H9J4 1324 aaKnown RBP17.86■□□□□ 0.45
USF1-205ENST00000473969 MYH14Q7Z406 1995 aaKnown RBP17.86■□□□□ 0.45
USF1-205ENST00000473969 KDM3BQ7LBC6 1761 aa17.85■□□□□ 0.45
USF1-205ENST00000473969 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
USF1-205ENST00000473969 PARP3Q9Y6F1 533 aa17.85■□□□□ 0.45
USF1-205ENST00000473969 DCAF8L1A6NGE4 600 aa17.84■□□□□ 0.45
USF1-205ENST00000473969 MMP10P09238 476 aa17.84■□□□□ 0.45
USF1-205ENST00000473969 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
USF1-205ENST00000473969 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
USF1-205ENST00000473969 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
USF1-205ENST00000473969 FHDC1Q9C0D6 1143 aaPredicted RBP17.84■□□□□ 0.45
USF1-205ENST00000473969 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
USF1-205ENST00000473969 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
USF1-205ENST00000473969 CHMP4AQ9BY43 222 aa17.83■□□□□ 0.44
USF1-205ENST00000473969 IL16Q14005 1332 aa17.82■□□□□ 0.44
USF1-205ENST00000473969 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
USF1-205ENST00000473969 MYL6BP14649 208 aa17.82■□□□□ 0.44
USF1-205ENST00000473969 FKBP8Q14318 412 aa17.82■□□□□ 0.44
USF1-205ENST00000473969 HOXB7P09629 217 aa17.81■□□□□ 0.44
USF1-205ENST00000473969 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
USF1-205ENST00000473969 NBPF26B4DH59 902 aa17.8■□□□□ 0.44
USF1-205ENST00000473969 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
USF1-205ENST00000473969 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
USF1-205ENST00000473969 NBPF10Q6P3W6 841 aaKnown RBP17.8■□□□□ 0.44
USF1-205ENST00000473969 NBPF15Q8N660 670 aa17.8■□□□□ 0.44
USF1-205ENST00000473969 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
USF1-205ENST00000473969 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
USF1-205ENST00000473969 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
USF1-205ENST00000473969 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
USF1-205ENST00000473969 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
USF1-205ENST00000473969 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
USF1-205ENST00000473969 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
USF1-205ENST00000473969 CAMTA2O94983 1202 aa17.77■□□□□ 0.44
USF1-205ENST00000473969 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
USF1-205ENST00000473969 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
USF1-205ENST00000473969 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.44
USF1-205ENST00000473969 C4AP0C0L4 1744 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 NPHP1O15259 732 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 TM4SF1P30408 202 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 NFIXQ14938 502 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
USF1-205ENST00000473969 DBF4Q9UBU7 674 aaPredicted RBP17.76■□□□□ 0.43
USF1-205ENST00000473969 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
USF1-205ENST00000473969 COL24A1Q17RW2 1714 aa17.75■□□□□ 0.43
USF1-205ENST00000473969 POLRMTO00411 1230 aaKnown RBP17.74■□□□□ 0.43
USF1-205ENST00000473969 RGL2O15211 777 aa17.74■□□□□ 0.43
USF1-205ENST00000473969 AIMP1Q12904 312 aaKnown RBP17.74■□□□□ 0.43
USF1-205ENST00000473969 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
USF1-205ENST00000473969 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
USF1-205ENST00000473969 C8orf58Q8NAV2 365 aa17.74■□□□□ 0.43
USF1-205ENST00000473969 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
USF1-205ENST00000473969 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
USF1-205ENST00000473969 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms