RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 A1BGP04217 495 aa16.68■□□□□ 0.26
SEC16A-209ENST00000472305 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
SEC16A-209ENST00000472305 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
SEC16A-209ENST00000472305 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
SEC16A-209ENST00000472305 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
SEC16A-209ENST00000472305 RGPD3A6NKT7 1758 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-209ENST00000472305 RGPD4Q7Z3J3 1758 aa16.68■□□□□ 0.26
SEC16A-209ENST00000472305 RREB1Q92766 1687 aa16.68■□□□□ 0.26
SEC16A-209ENST00000472305 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
SEC16A-209ENST00000472305 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
SEC16A-209ENST00000472305 NUP188Q5SRE5 1749 aa16.66■□□□□ 0.26
SEC16A-209ENST00000472305 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
SEC16A-209ENST00000472305 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
SEC16A-209ENST00000472305 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
SEC16A-209ENST00000472305 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
SEC16A-209ENST00000472305 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
SEC16A-209ENST00000472305 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
SEC16A-209ENST00000472305 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
SEC16A-209ENST00000472305 TEX13AQ9BXU3 409 aaPredicted RBP16.65■□□□□ 0.26
SEC16A-209ENST00000472305 C5P01031 1676 aa16.65■□□□□ 0.26
SEC16A-209ENST00000472305 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
SEC16A-209ENST00000472305 VAMP4O75379 141 aa16.64■□□□□ 0.25
SEC16A-209ENST00000472305 STARD3NLO95772 234 aa16.64■□□□□ 0.25
SEC16A-209ENST00000472305 ANXA1P04083 346 aa16.64■□□□□ 0.25
SEC16A-209ENST00000472305 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
SEC16A-209ENST00000472305 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
SEC16A-209ENST00000472305 STK32BQ9NY57 414 aa16.64■□□□□ 0.25
SEC16A-209ENST00000472305 CEP350Q5VT06 3117 aa16.64■□□□□ 0.25
SEC16A-209ENST00000472305 GNPATO15228 680 aa16.63■□□□□ 0.25
SEC16A-209ENST00000472305 PROSER3Q2NL68 480 aa16.63■□□□□ 0.25
SEC16A-209ENST00000472305 RC3H1Q5TC82 1133 aaKnown RBP16.63■□□□□ 0.25
SEC16A-209ENST00000472305 AK7Q96M32 723 aa16.63■□□□□ 0.25
SEC16A-209ENST00000472305 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 C4BP0C0L5 1744 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 TAF1LQ8IZX4 1826 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 RPS6KA4O75676 772 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 PHF14O94880 888 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 PDIA6Q15084 440 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 HDGFL1Q5TGJ6 251 aa16.62■□□□□ 0.25
SEC16A-209ENST00000472305 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
SEC16A-209ENST00000472305 CICQ96RK0 1608 aaPredicted RBP16.62■□□□□ 0.25
SEC16A-209ENST00000472305 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
SEC16A-209ENST00000472305 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
SEC16A-209ENST00000472305 UTRNP46939 3433 aa16.61■□□□□ 0.25
SEC16A-209ENST00000472305 HOXB7P09629 217 aa16.61■□□□□ 0.25
SEC16A-209ENST00000472305 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
SEC16A-209ENST00000472305 PNPLA7Q6ZV29 1317 aa16.61■□□□□ 0.25
SEC16A-209ENST00000472305 MYL6BP14649 208 aa16.6■□□□□ 0.25
SEC16A-209ENST00000472305 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
SEC16A-209ENST00000472305 CHPF2Q9P2E5 772 aa16.6■□□□□ 0.25
SEC16A-209ENST00000472305 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
SEC16A-209ENST00000472305 SOS1Q07889 1333 aaPredicted RBP16.6■□□□□ 0.25
SEC16A-209ENST00000472305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.59■□□□□ 0.25
SEC16A-209ENST00000472305 EIF5P55010 431 aaKnown RBP16.59■□□□□ 0.25
SEC16A-209ENST00000472305 LRP10Q7Z4F1 713 aa16.59■□□□□ 0.25
SEC16A-209ENST00000472305 ZNF784Q8NCA9 323 aaPredicted RBP16.59■□□□□ 0.25
SEC16A-209ENST00000472305 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
SEC16A-209ENST00000472305 RTCBQ9Y3I0 505 aaKnown RBP16.59■□□□□ 0.25
SEC16A-209ENST00000472305 ZNF330Q9Y3S2 320 aaPredicted RBP16.59■□□□□ 0.25
SEC16A-209ENST00000472305 IL6STP40189 918 aaPredicted RBP16.57■□□□□ 0.24
SEC16A-209ENST00000472305 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
SEC16A-209ENST00000472305 SPON1Q9HCB6 807 aa16.57■□□□□ 0.24
SEC16A-209ENST00000472305 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
SEC16A-209ENST00000472305 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
SEC16A-209ENST00000472305 G2E3Q7L622 706 aa16.56■□□□□ 0.24
SEC16A-209ENST00000472305 PHAXQ9H814 394 aaKnown RBP16.56■□□□□ 0.24
SEC16A-209ENST00000472305 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
SEC16A-209ENST00000472305 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
SEC16A-209ENST00000472305 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
SEC16A-209ENST00000472305 COL15A1P39059 1388 aa16.55■□□□□ 0.24
SEC16A-209ENST00000472305 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
SEC16A-209ENST00000472305 MSH5O43196 834 aa16.55■□□□□ 0.24
SEC16A-209ENST00000472305 SSFA2P28290 1259 aa16.55■□□□□ 0.24
SEC16A-209ENST00000472305 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
SEC16A-209ENST00000472305 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
SEC16A-209ENST00000472305 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
SEC16A-209ENST00000472305 C1QTNF8P60827 252 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 AIMP1Q12904 312 aaKnown RBP16.54■□□□□ 0.24
SEC16A-209ENST00000472305 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 ARXQ96QS3 562 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
SEC16A-209ENST00000472305 MRPL50Q8N5N7 158 aaKnown RBP16.53■□□□□ 0.24
SEC16A-209ENST00000472305 BCL2L12Q9HB09 334 aa16.53■□□□□ 0.24
SEC16A-209ENST00000472305 ADRA2BP18089 450 aa16.52■□□□□ 0.24
SEC16A-209ENST00000472305 RFC4P35249 363 aa16.52■□□□□ 0.24
SEC16A-209ENST00000472305 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
SEC16A-209ENST00000472305 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.24
SEC16A-209ENST00000472305 A0A087WZG4 1122 aa16.51■□□□□ 0.23
SEC16A-209ENST00000472305 CAMTA2O94983 1202 aa16.51■□□□□ 0.23
SEC16A-209ENST00000472305 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
SEC16A-209ENST00000472305 HLFQ16534 295 aa16.51■□□□□ 0.23
SEC16A-209ENST00000472305 FLAD1Q8NFF5 587 aa16.51■□□□□ 0.23
SEC16A-209ENST00000472305 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
SEC16A-209ENST00000472305 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
SEC16A-209ENST00000472305 NARFQ9UHQ1 456 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms