RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 CYP19A1P11511 503 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-207ENST00000472103 SMIM5Q71RC9 77 aa19.01■□□□□ 0.63
SMARCD3-207ENST00000472103 AMIGO3Q86WK7 504 aa19.01■□□□□ 0.63
SMARCD3-207ENST00000472103 MYH16Q9H6N6 1097 aa19.01■□□□□ 0.63
SMARCD3-207ENST00000472103 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
SMARCD3-207ENST00000472103 A1BGP04217 495 aa18.99■□□□□ 0.63
SMARCD3-207ENST00000472103 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
SMARCD3-207ENST00000472103 PIP4K2AP48426 406 aaPredicted RBP18.99■□□□□ 0.63
SMARCD3-207ENST00000472103 INTS5Q6P9B9 1019 aaKnown RBP18.99■□□□□ 0.63
SMARCD3-207ENST00000472103 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
SMARCD3-207ENST00000472103 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
SMARCD3-207ENST00000472103 EIF2S2P20042 333 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-207ENST00000472103 ZBTB1Q9Y2K1 713 aa18.98■□□□□ 0.63
SMARCD3-207ENST00000472103 UBR3Q6ZT12 1888 aa18.97■□□□□ 0.63
SMARCD3-207ENST00000472103 TWISTNBQ3B726 338 aaPredicted RBP18.97■□□□□ 0.63
SMARCD3-207ENST00000472103 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
SMARCD3-207ENST00000472103 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
SMARCD3-207ENST00000472103 VAMP4O75379 141 aa18.96■□□□□ 0.63
SMARCD3-207ENST00000472103 NBPF14Q5TI25 921 aa18.96■□□□□ 0.63
SMARCD3-207ENST00000472103 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
SMARCD3-207ENST00000472103 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
SMARCD3-207ENST00000472103 TEX13AQ9BXU3 409 aaPredicted RBP18.96■□□□□ 0.63
SMARCD3-207ENST00000472103 TCERG1O14776 1098 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-207ENST00000472103 ANXA1P04083 346 aa18.95■□□□□ 0.62
SMARCD3-207ENST00000472103 RC3H1Q5TC82 1133 aaKnown RBP18.95■□□□□ 0.62
SMARCD3-207ENST00000472103 CCDC87Q9NVE4 849 aa18.95■□□□□ 0.62
SMARCD3-207ENST00000472103 STARD3NLO95772 234 aa18.94■□□□□ 0.62
SMARCD3-207ENST00000472103 HOXB7P09629 217 aa18.94■□□□□ 0.62
SMARCD3-207ENST00000472103 CANXP27824 592 aaKnown RBP18.94■□□□□ 0.62
SMARCD3-207ENST00000472103 PDIA6Q15084 440 aa18.94■□□□□ 0.62
SMARCD3-207ENST00000472103 PROSER3Q2NL68 480 aa18.94■□□□□ 0.62
SMARCD3-207ENST00000472103 GNPATO15228 680 aa18.93■□□□□ 0.62
SMARCD3-207ENST00000472103 SLC15A2Q16348 729 aa18.93■□□□□ 0.62
SMARCD3-207ENST00000472103 HDGFL1Q5TGJ6 251 aa18.93■□□□□ 0.62
SMARCD3-207ENST00000472103 AK7Q96M32 723 aa18.93■□□□□ 0.62
SMARCD3-207ENST00000472103 STK32BQ9NY57 414 aa18.93■□□□□ 0.62
SMARCD3-207ENST00000472103 RPS6KA4O75676 772 aa18.92■□□□□ 0.62
SMARCD3-207ENST00000472103 LRP10Q7Z4F1 713 aa18.92■□□□□ 0.62
SMARCD3-207ENST00000472103 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
SMARCD3-207ENST00000472103 CHPF2Q9P2E5 772 aa18.91■□□□□ 0.62
SMARCD3-207ENST00000472103 QSER1Q2KHR3 1735 aa18.91■□□□□ 0.62
SMARCD3-207ENST00000472103 PHF14O94880 888 aa18.9■□□□□ 0.62
SMARCD3-207ENST00000472103 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
SMARCD3-207ENST00000472103 PDGFDQ9GZP0 370 aaPredicted RBP18.9■□□□□ 0.62
SMARCD3-207ENST00000472103 PNPLA7Q6ZV29 1317 aa18.9■□□□□ 0.62
SMARCD3-207ENST00000472103 C4AP0C0L4 1744 aa18.89■□□□□ 0.61
SMARCD3-207ENST00000472103 MYL6BP14649 208 aa18.89■□□□□ 0.61
SMARCD3-207ENST00000472103 TFCP2L1Q9NZI6 479 aa18.89■□□□□ 0.61
SMARCD3-207ENST00000472103 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-207ENST00000472103 R3HDM1Q15032 1099 aaKnown RBP18.88■□□□□ 0.61
SMARCD3-207ENST00000472103 COL23A1Q86Y22 540 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-207ENST00000472103 RTCBQ9Y3I0 505 aaKnown RBP18.88■□□□□ 0.61
SMARCD3-207ENST00000472103 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-207ENST00000472103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 COL15A1P39059 1388 aa18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 IL6STP40189 918 aaPredicted RBP18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 ARHGEF1Q92888 912 aaKnown RBP18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 DDX21Q9NR30 783 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMARCD3-207ENST00000472103 SSFA2P28290 1259 aa18.86■□□□□ 0.61
SMARCD3-207ENST00000472103 TTLL7Q6ZT98 887 aa18.86■□□□□ 0.61
SMARCD3-207ENST00000472103 G2E3Q7L622 706 aa18.86■□□□□ 0.61
SMARCD3-207ENST00000472103 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-207ENST00000472103 DBF4Q9UBU7 674 aaPredicted RBP18.86■□□□□ 0.61
SMARCD3-207ENST00000472103 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
SMARCD3-207ENST00000472103 BCL2L13Q9BXK5 485 aa18.85■□□□□ 0.61
SMARCD3-207ENST00000472103 SRP68Q9UHB9 627 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-207ENST00000472103 CASZ1Q86V15 1759 aa18.85■□□□□ 0.61
SMARCD3-207ENST00000472103 HMGB2P26583 209 aaKnown RBP18.84■□□□□ 0.61
SMARCD3-207ENST00000472103 TRAPPC3LQ5T215 181 aa18.84■□□□□ 0.61
SMARCD3-207ENST00000472103 XAGE3Q8WTP9 111 aa18.84■□□□□ 0.61
SMARCD3-207ENST00000472103 TBC1D2BQ9UPU7 963 aa18.84■□□□□ 0.61
SMARCD3-207ENST00000472103 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
SMARCD3-207ENST00000472103 RARSP54136 660 aaKnown RBP18.83■□□□□ 0.6
SMARCD3-207ENST00000472103 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
SMARCD3-207ENST00000472103 COPS6Q7L5N1 327 aa18.83■□□□□ 0.6
SMARCD3-207ENST00000472103 MRPL50Q8N5N7 158 aaKnown RBP18.83■□□□□ 0.6
SMARCD3-207ENST00000472103 CT47B1P0C2W7 299 aaPredicted RBP18.82■□□□□ 0.6
SMARCD3-207ENST00000472103 ADRA2BP18089 450 aa18.82■□□□□ 0.6
SMARCD3-207ENST00000472103 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-207ENST00000472103 BCL2L12Q9HB09 334 aa18.82■□□□□ 0.6
SMARCD3-207ENST00000472103 BCORQ6W2J9 1755 aa18.82■□□□□ 0.6
SMARCD3-207ENST00000472103 CACNA1FO60840 1977 aa18.82■□□□□ 0.6
SMARCD3-207ENST00000472103 CAMTA2O94983 1202 aa18.81■□□□□ 0.6
SMARCD3-207ENST00000472103 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
SMARCD3-207ENST00000472103 HYPKQ9NX55 129 aa18.81■□□□□ 0.6
SMARCD3-207ENST00000472103 SCN7AQ01118 1682 aa18.81■□□□□ 0.6
SMARCD3-207ENST00000472103 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 MSH5O43196 834 aa18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 BCAR3O75815 825 aa18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 ALDH1L2Q3SY69 923 aa18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 USPL1Q5W0Q7 1092 aa18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 ARXQ96QS3 562 aa18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 NARFQ9UHQ1 456 aa18.8■□□□□ 0.6
SMARCD3-207ENST00000472103 RFC4P35249 363 aa18.79■□□□□ 0.6
SMARCD3-207ENST00000472103 HLFQ16534 295 aa18.79■□□□□ 0.6
SMARCD3-207ENST00000472103 FLAD1Q8NFF5 587 aa18.79■□□□□ 0.6
SMARCD3-207ENST00000472103 A0A087WZG4 1122 aa18.78■□□□□ 0.6
SMARCD3-207ENST00000472103 GYS1P13807 737 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms