RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.33
APLF-204ENST00000471727 NUCB2P80303 420 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 MTX1Q13505 466 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 RAPGEF4Q8WZA2 1011 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
APLF-204ENST00000471727 TATP17735 454 aaPredicted RBP13.01□□□□□ -0.33
APLF-204ENST00000471727 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
APLF-204ENST00000471727 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
APLF-204ENST00000471727 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
APLF-204ENST00000471727 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
APLF-204ENST00000471727 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
APLF-204ENST00000471727 TRAK2O60296 914 aa13□□□□□ -0.33
APLF-204ENST00000471727 IL17RAQ96F46 866 aa13□□□□□ -0.33
APLF-204ENST00000471727 ESYT1Q9BSJ8 1104 aa13□□□□□ -0.33
APLF-204ENST00000471727 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
APLF-204ENST00000471727 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
APLF-204ENST00000471727 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
APLF-204ENST00000471727 RHPN1Q8TCX5 695 aa12.99□□□□□ -0.33
APLF-204ENST00000471727 TNPO1Q92973 898 aaKnown RBP12.99□□□□□ -0.33
APLF-204ENST00000471727 DDX21Q9NR30 783 aaKnown RBP eCLIP12.99□□□□□ -0.33
APLF-204ENST00000471727 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
APLF-204ENST00000471727 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
APLF-204ENST00000471727 KCNQ3O43525 872 aa12.99□□□□□ -0.33
APLF-204ENST00000471727 CHMLP26374 656 aa12.99□□□□□ -0.33
APLF-204ENST00000471727 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
APLF-204ENST00000471727 ADAMTS7Q9UKP4 1686 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 ADCY9O60503 1353 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
APLF-204ENST00000471727 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 TRIM6-TRIM34B2RNG4 842 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
APLF-204ENST00000471727 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
APLF-204ENST00000471727 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
APLF-204ENST00000471727 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
APLF-204ENST00000471727 C9orf78Q9NZ63 289 aaPredicted RBP12.97□□□□□ -0.33
APLF-204ENST00000471727 PXDNQ92626 1479 aa12.97□□□□□ -0.33
APLF-204ENST00000471727 UTYO14607 1347 aa12.96□□□□□ -0.33
APLF-204ENST00000471727 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.33
APLF-204ENST00000471727 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
APLF-204ENST00000471727 CNTROBQ8N137 903 aa12.96□□□□□ -0.33
APLF-204ENST00000471727 RILPL2Q969X0 211 aa12.96□□□□□ -0.33
APLF-204ENST00000471727 MAP3K2Q9Y2U5 619 aa12.96□□□□□ -0.33
APLF-204ENST00000471727 PHKG2P15735 406 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
APLF-204ENST00000471727 ZNF790Q6PG37 636 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
APLF-204ENST00000471727 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 NLRP2Q9NX02 1062 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 TNS3Q68CZ2 1445 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 RGPD2P0DJD1 1756 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 CPDO75976 1380 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
APLF-204ENST00000471727 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
APLF-204ENST00000471727 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
APLF-204ENST00000471727 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
APLF-204ENST00000471727 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
APLF-204ENST00000471727 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
APLF-204ENST00000471727 GRM8O00222 908 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 RUFY2Q8WXA3 655 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 INTS4Q96HW7 963 aaKnown RBP12.93□□□□□ -0.34
APLF-204ENST00000471727 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 ANO2Q9NQ90 1003 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
APLF-204ENST00000471727 SPATA31A3Q5VYP0 1347 aa12.93□□□□□ -0.34
APLF-204ENST00000471727 CYP2E1P05181 493 aaPredicted RBP12.92□□□□□ -0.34
APLF-204ENST00000471727 ANXA1P04083 346 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 SNRPA1P09661 255 aaKnown RBP12.91□□□□□ -0.34
APLF-204ENST00000471727 MRE11P49959 708 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 NEK4P51957 841 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 PDIA6Q15084 440 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 NUTM1Q86Y26 1132 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 HIP1O00291 1037 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 SGSM2O43147 1006 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
APLF-204ENST00000471727 CUL4AQ13619 759 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
APLF-204ENST00000471727 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
APLF-204ENST00000471727 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 MRC1P22897 1456 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
APLF-204ENST00000471727 SSFA2P28290 1259 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 HSPA4P34932 840 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
APLF-204ENST00000471727 PROSER3Q2NL68 480 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
APLF-204ENST00000471727 COL18A1P39060 1754 aa12.9□□□□□ -0.35
APLF-204ENST00000471727 COL15A1P39059 1388 aa12.89□□□□□ -0.35
APLF-204ENST00000471727 KLHL40Q2TBA0 621 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms