RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 STAU1O95793 577 aaKnown RBP8.69□□□□□ -1.02
RBM39-228ENST00000471635 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
RBM39-228ENST00000471635 FGFR3P22607 806 aa8.69□□□□□ -1.02
RBM39-228ENST00000471635 USP4Q13107 963 aa8.69□□□□□ -1.02
RBM39-228ENST00000471635 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
RBM39-228ENST00000471635 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
RBM39-228ENST00000471635 ESYT1Q9BSJ8 1104 aa8.69□□□□□ -1.02
RBM39-228ENST00000471635 DYRK3O43781 588 aa8.68□□□□□ -1.02
RBM39-228ENST00000471635 CENPCQ03188 943 aa8.68□□□□□ -1.02
RBM39-228ENST00000471635 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
RBM39-228ENST00000471635 ABHD17AQ96GS6 310 aa8.68□□□□□ -1.02
RBM39-228ENST00000471635 SOX11P35716 441 aa8.67□□□□□ -1.02
RBM39-228ENST00000471635 PLPP7Q8NBV4 271 aa8.67□□□□□ -1.02
RBM39-228ENST00000471635 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
RBM39-228ENST00000471635 RAD21O60216 631 aa8.66□□□□□ -1.02
RBM39-228ENST00000471635 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
RBM39-228ENST00000471635 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
RBM39-228ENST00000471635 NDFIP2Q9NV92 336 aa8.66□□□□□ -1.02
RBM39-228ENST00000471635 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 UBTFP17480 764 aaKnown RBP8.65□□□□□ -1.02
RBM39-228ENST00000471635 PHKA2P46019 1235 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 CTBSQ01459 385 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 ESCO1Q5FWF5 840 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 WWC1Q8IX03 1113 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 SIRT1Q96EB6 747 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 ZSCAN10Q96SZ4 725 aaPredicted RBP8.65□□□□□ -1.02
RBM39-228ENST00000471635 ETNK1Q9HBU6 452 aa8.65□□□□□ -1.02
RBM39-228ENST00000471635 PIK3CDO00329 1044 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 GTF2E1P29083 439 aaPredicted RBP8.64□□□□□ -1.03
RBM39-228ENST00000471635 FLIIQ13045 1269 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 LRP8Q14114 963 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
RBM39-228ENST00000471635 TRIM11Q96F44 468 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 FHDC1Q9C0D6 1143 aaPredicted RBP8.64□□□□□ -1.03
RBM39-228ENST00000471635 RUBCNLQ9H714 662 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 HRH3Q9Y5N1 445 aa8.64□□□□□ -1.03
RBM39-228ENST00000471635 BNIP3LO60238 219 aa8.63□□□□□ -1.03
RBM39-228ENST00000471635 ADH6P28332 368 aa8.63□□□□□ -1.03
RBM39-228ENST00000471635 PLVAPQ9BX97 442 aa8.63□□□□□ -1.03
RBM39-228ENST00000471635 SPDYE3A6NKU9 549 aa8.62□□□□□ -1.03
RBM39-228ENST00000471635 TLR1Q15399 786 aa8.62□□□□□ -1.03
RBM39-228ENST00000471635 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
RBM39-228ENST00000471635 PRSS36Q5K4E3 855 aa8.62□□□□□ -1.03
RBM39-228ENST00000471635 SKIP12755 728 aa8.61□□□□□ -1.03
RBM39-228ENST00000471635 SCNN1DP51172 638 aa8.61□□□□□ -1.03
RBM39-228ENST00000471635 GDF10P55107 478 aa8.61□□□□□ -1.03
RBM39-228ENST00000471635 C4orf17Q53FE4 359 aa8.61□□□□□ -1.03
RBM39-228ENST00000471635 FIGNL1Q6PIW4 674 aa8.61□□□□□ -1.03
RBM39-228ENST00000471635 ALG2Q9H553 416 aa8.61□□□□□ -1.03
RBM39-228ENST00000471635 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
RBM39-228ENST00000471635 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
RBM39-228ENST00000471635 MSX1P28360 303 aa8.6□□□□□ -1.03
RBM39-228ENST00000471635 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
RBM39-228ENST00000471635 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
RBM39-228ENST00000471635 CRISPLD1Q9H336 500 aa8.6□□□□□ -1.03
RBM39-228ENST00000471635 APBA3O96018 575 aa8.59□□□□□ -1.03
RBM39-228ENST00000471635 INHAP05111 366 aa8.58□□□□□ -1.04
RBM39-228ENST00000471635 EML3Q32P44 896 aa8.58□□□□□ -1.04
RBM39-228ENST00000471635 RHBDD1Q8TEB9 315 aa8.58□□□□□ -1.04
RBM39-228ENST00000471635 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
RBM39-228ENST00000471635 PPARGC1BQ86YN6 1023 aaKnown RBP8.57□□□□□ -1.04
RBM39-228ENST00000471635 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 NCOA4Q13772 614 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 FAM182BQ5T319 152 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 FCHSD1Q86WN1 690 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 ADAMTS19Q8TE59 1207 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
RBM39-228ENST00000471635 TMEM229AB2RXF0 380 aa8.55□□□□□ -1.04
RBM39-228ENST00000471635 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
RBM39-228ENST00000471635 NACC1Q96RE7 527 aa8.55□□□□□ -1.04
RBM39-228ENST00000471635 NOD1Q9Y239 953 aa8.55□□□□□ -1.04
RBM39-228ENST00000471635 PCDHGA11Q9Y5H2 935 aa8.55□□□□□ -1.04
RBM39-228ENST00000471635 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
RBM39-228ENST00000471635 SMTNP53814 917 aa8.54□□□□□ -1.04
RBM39-228ENST00000471635 GTF2IP78347 998 aa8.54□□□□□ -1.04
RBM39-228ENST00000471635 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
RBM39-228ENST00000471635 HYAL3O43820 417 aaPredicted RBP8.53□□□□□ -1.04
RBM39-228ENST00000471635 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
RBM39-228ENST00000471635 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
RBM39-228ENST00000471635 PSME1Q06323 249 aa8.53□□□□□ -1.04
RBM39-228ENST00000471635 HDGFL1Q5TGJ6 251 aa8.53□□□□□ -1.04
RBM39-228ENST00000471635 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
RBM39-228ENST00000471635 KLF15Q9UIH9 416 aa8.53□□□□□ -1.04
RBM39-228ENST00000471635 LZTS3O60299 673 aaPredicted RBP8.52□□□□□ -1.05
RBM39-228ENST00000471635 TBC1D9Q6ZT07 1266 aa8.52□□□□□ -1.05
RBM39-228ENST00000471635 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
RBM39-228ENST00000471635 NIFKQ9BYG3 293 aaKnown RBP8.52□□□□□ -1.05
RBM39-228ENST00000471635 A6NJY4 79 aa8.51□□□□□ -1.05
RBM39-228ENST00000471635 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
RBM39-228ENST00000471635 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
RBM39-228ENST00000471635 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
RBM39-228ENST00000471635 KRTAP4-7Q9BYR0 210 aa8.51□□□□□ -1.05
RBM39-228ENST00000471635 ZCCHC2Q9C0B9 1178 aaKnown RBP8.51□□□□□ -1.05
RBM39-228ENST00000471635 COBLO75128 1261 aa8.5□□□□□ -1.05
RBM39-228ENST00000471635 ZNF468Q5VIY5 522 aaPredicted RBP8.5□□□□□ -1.05
RBM39-228ENST00000471635 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
RBM39-228ENST00000471635 C1orf216Q8TAB5 229 aa8.5□□□□□ -1.05
RBM39-228ENST00000471635 SLC4A9Q96Q91 983 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms