RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 ELOA3CA0A087WX78 387 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-209ENST00000471165 DCDC2BA2VCK2 349 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 ELOA3DA6NLF2 546 aaPredicted RBP8.7□□□□□ -1.02
CLIP4-209ENST00000471165 TNP2Q05952 138 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 ADGRE1Q14246 886 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 ELOA3BQ3SY89 546 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 ELOA3Q8NG57 546 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 RSPH6AQ9H0K4 717 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
CLIP4-209ENST00000471165 RNF112Q9ULX5 631 aa8.7□□□□□ -1.02
CLIP4-209ENST00000471165 C9orf172C9J069 976 aa8.69□□□□□ -1.02
CLIP4-209ENST00000471165 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
CLIP4-209ENST00000471165 NLRP8Q86W28 1048 aa8.69□□□□□ -1.02
CLIP4-209ENST00000471165 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
CLIP4-209ENST00000471165 HMX1Q9NP08 348 aaPredicted RBP8.69□□□□□ -1.02
CLIP4-209ENST00000471165 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
CLIP4-209ENST00000471165 ALAS2P22557 587 aa8.68□□□□□ -1.02
CLIP4-209ENST00000471165 TP53INP1Q96A56 240 aa8.68□□□□□ -1.02
CLIP4-209ENST00000471165 PRR12Q9ULL5 1215 aa8.68□□□□□ -1.02
CLIP4-209ENST00000471165 AP1G2O75843 785 aa8.67□□□□□ -1.02
CLIP4-209ENST00000471165 TXNRD3Q86VQ6 643 aa8.67□□□□□ -1.02
CLIP4-209ENST00000471165 MDFIQ99750 246 aa8.67□□□□□ -1.02
CLIP4-209ENST00000471165 M0R082 166 aa8.66□□□□□ -1.02
CLIP4-209ENST00000471165 ZNF417Q8TAU3 575 aa8.66□□□□□ -1.02
CLIP4-209ENST00000471165 RHBDD1Q8TEB9 315 aa8.66□□□□□ -1.02
CLIP4-209ENST00000471165 ZNF587Q96SQ5 575 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-209ENST00000471165 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
CLIP4-209ENST00000471165 KHNYNO15037 678 aaKnown RBP8.65□□□□□ -1.02
CLIP4-209ENST00000471165 TBC1D9Q6ZT07 1266 aa8.65□□□□□ -1.02
CLIP4-209ENST00000471165 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
CLIP4-209ENST00000471165 SELPP16109 830 aa8.64□□□□□ -1.03
CLIP4-209ENST00000471165 ATP4AP20648 1035 aa8.64□□□□□ -1.03
CLIP4-209ENST00000471165 LAMC2Q13753 1193 aa8.64□□□□□ -1.03
CLIP4-209ENST00000471165 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
CLIP4-209ENST00000471165 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
CLIP4-209ENST00000471165 IRAK1P51617 712 aa8.63□□□□□ -1.03
CLIP4-209ENST00000471165 C8orf86Q6ZUL3 223 aa8.63□□□□□ -1.03
CLIP4-209ENST00000471165 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
CLIP4-209ENST00000471165 NID1P14543 1247 aa8.62□□□□□ -1.03
CLIP4-209ENST00000471165 PLA2G4AP47712 749 aa8.62□□□□□ -1.03
CLIP4-209ENST00000471165 RNF114Q9Y508 228 aa8.62□□□□□ -1.03
CLIP4-209ENST00000471165 C1orf216Q8TAB5 229 aa8.61□□□□□ -1.03
CLIP4-209ENST00000471165 AK7Q96M32 723 aa8.61□□□□□ -1.03
CLIP4-209ENST00000471165 SSBP4Q9BWG4 385 aaPredicted RBP8.61□□□□□ -1.03
CLIP4-209ENST00000471165 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
CLIP4-209ENST00000471165 FBXO45P0C2W1 286 aa8.6□□□□□ -1.03
CLIP4-209ENST00000471165 TAL1P17542 331 aaPredicted RBP8.6□□□□□ -1.03
CLIP4-209ENST00000471165 SYT9Q86SS6 491 aa8.6□□□□□ -1.03
CLIP4-209ENST00000471165 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
CLIP4-209ENST00000471165 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
CLIP4-209ENST00000471165 ALBP02768 609 aa8.59□□□□□ -1.03
CLIP4-209ENST00000471165 USP17L8P0C7I0 530 aa8.59□□□□□ -1.03
CLIP4-209ENST00000471165 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-209ENST00000471165 STRN4Q9NRL3 753 aa8.59□□□□□ -1.03
CLIP4-209ENST00000471165 ADARB2-AS1A8MUL3 147 aa8.58□□□□□ -1.04
CLIP4-209ENST00000471165 FAM157BP0CG42 384 aa8.58□□□□□ -1.04
CLIP4-209ENST00000471165 NRG1Q02297 640 aaPredicted RBP8.58□□□□□ -1.04
CLIP4-209ENST00000471165 PDE4DQ08499 809 aa8.58□□□□□ -1.04
CLIP4-209ENST00000471165 ESCO1Q5FWF5 840 aa8.58□□□□□ -1.04
CLIP4-209ENST00000471165 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
CLIP4-209ENST00000471165 PLCB2Q00722 1185 aa8.57□□□□□ -1.04
CLIP4-209ENST00000471165 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
CLIP4-209ENST00000471165 TLR1Q15399 786 aa8.56□□□□□ -1.04
CLIP4-209ENST00000471165 SHISA2Q6UWI4 295 aa8.56□□□□□ -1.04
CLIP4-209ENST00000471165 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
CLIP4-209ENST00000471165 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLIP4-209ENST00000471165 SIN3BO75182 1162 aa8.55□□□□□ -1.04
CLIP4-209ENST00000471165 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-209ENST00000471165 ARSJQ5FYB0 599 aaPredicted RBP8.55□□□□□ -1.04
CLIP4-209ENST00000471165 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
CLIP4-209ENST00000471165 TRIM34Q9BYJ4 488 aa8.55□□□□□ -1.04
CLIP4-209ENST00000471165 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
CLIP4-209ENST00000471165 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
CLIP4-209ENST00000471165 KRTAP4-11Q9BYQ6 195 aa8.54□□□□□ -1.04
CLIP4-209ENST00000471165 EFSO43281 561 aa8.53□□□□□ -1.04
CLIP4-209ENST00000471165 SSTR4P31391 388 aa8.53□□□□□ -1.04
CLIP4-209ENST00000471165 SKIV2LQ15477 1246 aaKnown RBP8.53□□□□□ -1.04
CLIP4-209ENST00000471165 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
CLIP4-209ENST00000471165 STAU1O95793 577 aaKnown RBP8.52□□□□□ -1.05
CLIP4-209ENST00000471165 ETNK1Q9HBU6 452 aa8.52□□□□□ -1.05
CLIP4-209ENST00000471165 OAS3Q9Y6K5 1087 aaKnown RBP8.52□□□□□ -1.05
CLIP4-209ENST00000471165 JAG1P78504 1218 aa8.51□□□□□ -1.05
CLIP4-209ENST00000471165 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
CLIP4-209ENST00000471165 C20orf204Q6ZNR8 217 aa8.51□□□□□ -1.05
CLIP4-209ENST00000471165 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
CLIP4-209ENST00000471165 ZIC5Q96T25 663 aa8.5□□□□□ -1.05
CLIP4-209ENST00000471165 NIFKQ9BYG3 293 aaKnown RBP8.5□□□□□ -1.05
CLIP4-209ENST00000471165 USP21Q9UK80 565 aa8.5□□□□□ -1.05
CLIP4-209ENST00000471165 GJA3Q9Y6H8 435 aa8.5□□□□□ -1.05
CLIP4-209ENST00000471165 CD97P48960 835 aa8.49□□□□□ -1.05
CLIP4-209ENST00000471165 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
CLIP4-209ENST00000471165 ADH7P40394 386 aa8.48□□□□□ -1.05
CLIP4-209ENST00000471165 RAC1P63000 192 aa8.48□□□□□ -1.05
CLIP4-209ENST00000471165 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
CLIP4-209ENST00000471165 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
CLIP4-209ENST00000471165 CCDC85AQ96PX6 553 aaPredicted RBP8.47□□□□□ -1.05
CLIP4-209ENST00000471165 LILRB5O75023 590 aa8.46□□□□□ -1.06
CLIP4-209ENST00000471165 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.06
CLIP4-209ENST00000471165 GP2P55259 537 aaKnown RBP8.46□□□□□ -1.06
CLIP4-209ENST00000471165 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms