RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 MAFBQ9Y5Q3 323 aaPredicted RBP10.71□□□□□ -0.69
PTP4A1-202ENST00000470661 ABCA9Q8IUA7 1624 aa10.7□□□□□ -0.7
PTP4A1-202ENST00000470661 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
PTP4A1-202ENST00000470661 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
PTP4A1-202ENST00000470661 PCDHGA11Q9Y5H2 935 aa10.7□□□□□ -0.7
PTP4A1-202ENST00000470661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.71e-6■■■□□ 15
PTP4A1-202ENST00000470661 RNF144AP50876 292 aaPredicted RBP10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 SCNN1DP51172 638 aa10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 GTF2IP78347 998 aa10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 CNKSR1Q969H4 720 aa10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 LRRIQ1Q96JM4 1722 aa10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 TTC37Q6PGP7 1564 aa10.69□□□□□ -0.7
PTP4A1-202ENST00000470661 LZTS3O60299 673 aaPredicted RBP10.68□□□□□ -0.7
PTP4A1-202ENST00000470661 VEGFBP49765 207 aa10.68□□□□□ -0.7
PTP4A1-202ENST00000470661 PSME1Q06323 249 aa10.68□□□□□ -0.7
PTP4A1-202ENST00000470661 PRICKLE2Q7Z3G6 844 aa10.68□□□□□ -0.7
PTP4A1-202ENST00000470661 ADGRL1O94910 1474 aa10.68□□□□□ -0.7
PTP4A1-202ENST00000470661 KIF14Q15058 1648 aa10.67□□□□□ -0.7
PTP4A1-202ENST00000470661 GDF10P55107 478 aa10.67□□□□□ -0.7
PTP4A1-202ENST00000470661 ESCO1Q5FWF5 840 aa10.67□□□□□ -0.7
PTP4A1-202ENST00000470661 SLC27A3Q5K4L6 730 aa10.67□□□□□ -0.7
PTP4A1-202ENST00000470661 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
PTP4A1-202ENST00000470661 AKNAQ7Z591 1439 aa10.67□□□□□ -0.7
PTP4A1-202ENST00000470661 ARID4BQ4LE39 1312 aaPredicted RBP10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 PCF11O94913 1555 aaKnown RBP10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 RHOQP17081 205 aa10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 LMOD1P29536 600 aaPredicted RBP10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 LYSMD3Q7Z3D4 306 aa10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 MKRN1Q9UHC7 482 aaKnown RBP10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 CASKIN1Q8WXD9 1431 aa10.66□□□□□ -0.7
PTP4A1-202ENST00000470661 ARAP3Q8WWN8 1544 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 CLDN10P78369 228 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 CENPCQ03188 943 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 PTSQ03393 145 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 CFAP70Q5T0N1 1121 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 SERTAD1Q9UHV2 236 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 HRH3Q9Y5N1 445 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 FANCAO15360 1455 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 HECW1Q76N89 1606 aa10.65□□□□□ -0.7
PTP4A1-202ENST00000470661 TMEM229AB2RXF0 380 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 INHAP05111 366 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 GPC1P35052 558 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 MLECQ14165 292 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 TRIM50Q86XT4 487 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 AFAP1Q8N556 730 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 GRIP2Q9C0E4 1043 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 NXF1Q9UBU9 619 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 CEP162Q5TB80 1403 aa10.64□□□□□ -0.71
PTP4A1-202ENST00000470661 EFCAB2Q5VUJ9 269 aa10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 FHDC1Q9C0D6 1143 aaPredicted RBP10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 TIMELESSQ9UNS1 1208 aa10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 PLCH2O75038 1416 aa10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 TROQ12816 1431 aaPredicted RBP10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 SCAPERQ9BY12 1400 aa10.63□□□□□ -0.71
PTP4A1-202ENST00000470661 NEO1Q92859 1461 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 FRMPD1Q5SYB0 1578 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 TERTO14746 1132 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 RFX1P22670 979 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 POU4F2Q12837 409 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 TLR1Q15399 786 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 TPCN2Q8NHX9 752 aa10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 DNAAF2Q9NVR5 837 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-202ENST00000470661 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
PTP4A1-202ENST00000470661 YEATS2Q9ULM3 1422 aa10.61□□□□□ -0.71
PTP4A1-202ENST00000470661 ZBTB7BO15156 539 aaPredicted RBP10.61□□□□□ -0.71
PTP4A1-202ENST00000470661 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.711e-10■■■■■ 51.9
PTP4A1-202ENST00000470661 ZSCAN10Q96SZ4 725 aaPredicted RBP10.61□□□□□ -0.71
PTP4A1-202ENST00000470661 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 RASA1P20936 1047 aa10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 KANK4Q5T7N3 995 aaPredicted RBP10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 CCDC155Q8N6L0 562 aa10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 C1orf115Q9H7X2 142 aa10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
PTP4A1-202ENST00000470661 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 WASLO00401 505 aaPredicted RBP10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 HNRNPMP52272 730 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 NFX1Q12986 1120 aaKnown RBP10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 CCDC102BQ68D86 513 aa10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 TMEM214Q6NUQ4 689 aaKnown RBP10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 NBPF10Q6P3W6 841 aaKnown RBP10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 NBPF15Q8N660 670 aa10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 PHLDB1Q86UU1 1377 aa10.59□□□□□ -0.71
PTP4A1-202ENST00000470661 SLC35F4A4IF30 521 aa10.58□□□□□ -0.72
PTP4A1-202ENST00000470661 H3BM21 787 aa10.58□□□□□ -0.72
PTP4A1-202ENST00000470661 CRTC2Q53ET0 693 aaPredicted RBP10.58□□□□□ -0.72
PTP4A1-202ENST00000470661 CCDC97Q96F63 343 aaPredicted RBP10.58□□□□□ -0.72
PTP4A1-202ENST00000470661 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
PTP4A1-202ENST00000470661 FYCO1Q9BQS8 1478 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 PHKA2P46019 1235 aa10.57□□□□□ -0.72
PTP4A1-202ENST00000470661 SMTNP53814 917 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms