RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 IL6STP40189 918 aaPredicted RBP14.27□□□□□ -0.13
RFTN1-208ENST00000470458 INTS5Q6P9B9 1019 aaKnown RBP14.27□□□□□ -0.13
RFTN1-208ENST00000470458 MCM10Q7L590 875 aa14.27□□□□□ -0.13
RFTN1-208ENST00000470458 TJP1Q07157 1748 aa14.27□□□□□ -0.13
RFTN1-208ENST00000470458 KCPQ6ZWJ8 1503 aa14.26□□□□□ -0.13
RFTN1-208ENST00000470458 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
RFTN1-208ENST00000470458 NARFQ9UHQ1 456 aa14.26□□□□□ -0.13
RFTN1-208ENST00000470458 SOS1Q07889 1333 aaPredicted RBP14.25□□□□□ -0.13
RFTN1-208ENST00000470458 TMPOP42166 694 aaKnown RBP14.25□□□□□ -0.13
RFTN1-208ENST00000470458 TGFB2P61812 414 aa14.25□□□□□ -0.13
RFTN1-208ENST00000470458 GPR162Q16538 588 aa14.25□□□□□ -0.13
RFTN1-208ENST00000470458 MSL1Q68DK7 614 aa14.25□□□□□ -0.13
RFTN1-208ENST00000470458 USP42Q9H9J4 1324 aaKnown RBP14.24□□□□□ -0.13
RFTN1-208ENST00000470458 MMP10P09238 476 aa14.24□□□□□ -0.13
RFTN1-208ENST00000470458 GYS1P13807 737 aa14.24□□□□□ -0.13
RFTN1-208ENST00000470458 ADAMTS8Q9UP79 889 aa14.24□□□□□ -0.13
RFTN1-208ENST00000470458 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
RFTN1-208ENST00000470458 ZNF652Q9Y2D9 606 aa14.24□□□□□ -0.13
RFTN1-208ENST00000470458 COL15A1P39059 1388 aa14.23□□□□□ -0.13
RFTN1-208ENST00000470458 CANXP27824 592 aaKnown RBP14.23□□□□□ -0.13
RFTN1-208ENST00000470458 EIF5P55010 431 aaKnown RBP14.23□□□□□ -0.13
RFTN1-208ENST00000470458 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
RFTN1-208ENST00000470458 CLEC4GQ6UXB4 293 aa14.22□□□□□ -0.13
RFTN1-208ENST00000470458 CHD4Q14839 1912 aa14.21□□□□□ -0.13
RFTN1-208ENST00000470458 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
RFTN1-208ENST00000470458 DCTN1Q14203 1278 aa14.21□□□□□ -0.13
RFTN1-208ENST00000470458 NGEFQ8N5V2 710 aa14.21□□□□□ -0.13
RFTN1-208ENST00000470458 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.13
RFTN1-208ENST00000470458 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
RFTN1-208ENST00000470458 AMIGO3Q86WK7 504 aa14.2□□□□□ -0.14
RFTN1-208ENST00000470458 C4AP0C0L4 1744 aa14.2□□□□□ -0.14
RFTN1-208ENST00000470458 TM4SF1P30408 202 aa14.19□□□□□ -0.14
RFTN1-208ENST00000470458 USPL1Q5W0Q7 1092 aa14.19□□□□□ -0.14
RFTN1-208ENST00000470458 GIGYF1O75420 1035 aaPredicted RBP14.18□□□□□ -0.14
RFTN1-208ENST00000470458 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
RFTN1-208ENST00000470458 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
RFTN1-208ENST00000470458 SETDB2Q96T68 719 aa14.18□□□□□ -0.14
RFTN1-208ENST00000470458 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
RFTN1-208ENST00000470458 KDM3BQ7LBC6 1761 aa14.18□□□□□ -0.14
RFTN1-208ENST00000470458 KIF13BQ9NQT8 1826 aa14.18□□□□□ -0.14
RFTN1-208ENST00000470458 A1BGP04217 495 aa14.17□□□□□ -0.14
RFTN1-208ENST00000470458 HOXB7P09629 217 aa14.17□□□□□ -0.14
RFTN1-208ENST00000470458 FKBP8Q14318 412 aa14.17□□□□□ -0.14
RFTN1-208ENST00000470458 DZIP3Q86Y13 1208 aaKnown RBP14.17□□□□□ -0.14
RFTN1-208ENST00000470458 CCDC146Q8IYE0 955 aa14.17□□□□□ -0.14
RFTN1-208ENST00000470458 CFAP44Q96MT7 982 aa14.17□□□□□ -0.14
RFTN1-208ENST00000470458 ZNF330Q9Y3S2 320 aaPredicted RBP14.17□□□□□ -0.14
RFTN1-208ENST00000470458 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
RFTN1-208ENST00000470458 NPHP1O15259 732 aa14.16□□□□□ -0.14
RFTN1-208ENST00000470458 KCNQ3O43525 872 aa14.16□□□□□ -0.14
RFTN1-208ENST00000470458 YY1P25490 414 aa14.16□□□□□ -0.14
RFTN1-208ENST00000470458 GNAI1P63096 354 aa14.16□□□□□ -0.14
RFTN1-208ENST00000470458 KIF6Q6ZMV9 814 aa14.16□□□□□ -0.14
RFTN1-208ENST00000470458 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
RFTN1-208ENST00000470458 SRP68Q9UHB9 627 aaKnown RBP14.16□□□□□ -0.14
RFTN1-208ENST00000470458 LAMB4A4D0S4 1761 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 ERVV-1B6SEH8 477 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 CHL1O00533 1208 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 CCDC27Q2M243 656 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 SMIM5Q71RC9 77 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 MIS18AQ9NYP9 233 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
RFTN1-208ENST00000470458 CARMIL3Q8ND23 1372 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
RFTN1-208ENST00000470458 APAF1O14727 1248 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 PDE6BP35913 854 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 NFIXQ14938 502 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 TPTE2Q6XPS3 522 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 NLGN2Q8NFZ4 835 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 IFT57Q9NWB7 429 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 TBC1D2BQ9UPU7 963 aa14.14□□□□□ -0.15
RFTN1-208ENST00000470458 SERPINB2P05120 415 aa14.13□□□□□ -0.15
RFTN1-208ENST00000470458 ST5P78524 1137 aa14.13□□□□□ -0.15
RFTN1-208ENST00000470458 THUMPD2Q9BTF0 503 aaKnown RBP14.13□□□□□ -0.15
RFTN1-208ENST00000470458 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
RFTN1-208ENST00000470458 RRP7AQ9Y3A4 280 aaKnown RBP14.13□□□□□ -0.15
RFTN1-208ENST00000470458 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
RFTN1-208ENST00000470458 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
RFTN1-208ENST00000470458 H0YIN7 160 aa14.12□□□□□ -0.15
RFTN1-208ENST00000470458 BRIP1Q9BX63 1249 aa14.12□□□□□ -0.15
RFTN1-208ENST00000470458 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
RFTN1-208ENST00000470458 CAMTA2O94983 1202 aa14.11□□□□□ -0.15
RFTN1-208ENST00000470458 HSP90AB3PQ58FF7 597 aa14.11□□□□□ -0.15
RFTN1-208ENST00000470458 DALRD3Q5D0E6 543 aaKnown RBP14.11□□□□□ -0.15
RFTN1-208ENST00000470458 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
RFTN1-208ENST00000470458 DDR1Q08345 913 aa14.1□□□□□ -0.15
RFTN1-208ENST00000470458 CNBD1Q8NA66 436 aa14.1□□□□□ -0.15
RFTN1-208ENST00000470458 SCN7AQ01118 1682 aa14.1□□□□□ -0.15
RFTN1-208ENST00000470458 EIF2S2P20042 333 aaKnown RBP14.09□□□□□ -0.15
RFTN1-208ENST00000470458 NBPF5PQ86XG9 351 aaPredicted RBP14.09□□□□□ -0.15
RFTN1-208ENST00000470458 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
RFTN1-208ENST00000470458 DDX21Q9NR30 783 aaKnown RBP eCLIP14.09□□□□□ -0.15
RFTN1-208ENST00000470458 DBF4Q9UBU7 674 aaPredicted RBP14.09□□□□□ -0.15
RFTN1-208ENST00000470458 NRXN2Q9P2S2 1712 aa14.09□□□□□ -0.15
RFTN1-208ENST00000470458 IL16Q14005 1332 aa14.09□□□□□ -0.15
RFTN1-208ENST00000470458 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
RFTN1-208ENST00000470458 AFDNP55196 1824 aaKnown RBP14.08□□□□□ -0.15
RFTN1-208ENST00000470458 A0A0G2JLW4 131 aa14.08□□□□□ -0.16
RFTN1-208ENST00000470458 NBPF26B4DH59 902 aa14.08□□□□□ -0.16
RFTN1-208ENST00000470458 DPEP1P16444 411 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms