RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 SNRPA1P09661 255 aaKnown RBP25.29■■□□□ 1.64
PCGF3-208ENST00000470161 UBR2Q8IWV8 1755 aa25.29■■□□□ 1.64
PCGF3-208ENST00000470161 COL5A3P25940 1745 aaPredicted RBP25.29■■□□□ 1.64
PCGF3-208ENST00000470161 RFC4P35249 363 aa25.29■■□□□ 1.64
PCGF3-208ENST00000470161 LAS1LQ9Y4W2 734 aaKnown RBP25.29■■□□□ 1.64
PCGF3-208ENST00000470161 ZBED9Q6R2W3 1325 aa25.28■■□□□ 1.64
PCGF3-208ENST00000470161 TJP1Q07157 1748 aa25.28■■□□□ 1.64
PCGF3-208ENST00000470161 INTS5Q6P9B9 1019 aaKnown RBP25.28■■□□□ 1.64
PCGF3-208ENST00000470161 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
PCGF3-208ENST00000470161 UBR3Q6ZT12 1888 aa25.28■■□□□ 1.64
PCGF3-208ENST00000470161 BABAM1Q9NWV8 329 aa25.27■■□□□ 1.64
PCGF3-208ENST00000470161 CALD1Q05682 793 aaKnown RBP25.26■■□□□ 1.63
PCGF3-208ENST00000470161 MSL1Q68DK7 614 aa25.26■■□□□ 1.63
PCGF3-208ENST00000470161 ARHGEF1Q92888 912 aaKnown RBP25.26■■□□□ 1.63
PCGF3-208ENST00000470161 CICQ96RK0 1608 aaPredicted RBP25.26■■□□□ 1.63
PCGF3-208ENST00000470161 CANXP27824 592 aaKnown RBP25.26■■□□□ 1.63
PCGF3-208ENST00000470161 PTGER2P43116 358 aa25.26■■□□□ 1.63
PCGF3-208ENST00000470161 ZBTB1Q9Y2K1 713 aa25.25■■□□□ 1.63
PCGF3-208ENST00000470161 EIF4A1P60842 406 aaKnown RBP25.23■■□□□ 1.63
PCGF3-208ENST00000470161 USP16Q9Y5T5 823 aa25.23■■□□□ 1.63
PCGF3-208ENST00000470161 MYH14Q7Z406 1995 aaKnown RBP25.23■■□□□ 1.63
PCGF3-208ENST00000470161 SENP3-EIF4A1A0A087X0R7 540 aa25.23■■□□□ 1.63
PCGF3-208ENST00000470161 ARXQ96QS3 562 aa25.23■■□□□ 1.63
PCGF3-208ENST00000470161 ZNF330Q9Y3S2 320 aaPredicted RBP25.23■■□□□ 1.63
PCGF3-208ENST00000470161 SOS1Q07889 1333 aaPredicted RBP25.21■■□□□ 1.63
PCGF3-208ENST00000470161 PRAMEF22A3QJZ6 481 aa25.21■■□□□ 1.63
PCGF3-208ENST00000470161 ZPR1O75312 459 aa25.21■■□□□ 1.63
PCGF3-208ENST00000470161 SGIP1Q9BQI5 828 aa25.21■■□□□ 1.63
PCGF3-208ENST00000470161 A1BGP04217 495 aa25.2■■□□□ 1.63
PCGF3-208ENST00000470161 CFAP44Q96MT7 982 aa25.2■■□□□ 1.63
PCGF3-208ENST00000470161 CHL1O00533 1208 aa25.2■■□□□ 1.62
PCGF3-208ENST00000470161 GIGYF1O75420 1035 aaPredicted RBP25.2■■□□□ 1.62
PCGF3-208ENST00000470161 NLGN1Q8N2Q7 840 aa25.2■■□□□ 1.62
PCGF3-208ENST00000470161 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
PCGF3-208ENST00000470161 COL15A1P39059 1388 aa25.18■■□□□ 1.62
PCGF3-208ENST00000470161 A0A087WZG4 1122 aa25.18■■□□□ 1.62
PCGF3-208ENST00000470161 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
PCGF3-208ENST00000470161 IL6STP40189 918 aaPredicted RBP25.17■■□□□ 1.62
PCGF3-208ENST00000470161 GNAI1P63096 354 aa25.17■■□□□ 1.62
PCGF3-208ENST00000470161 CCDC27Q2M243 656 aa25.17■■□□□ 1.62
PCGF3-208ENST00000470161 KLHL34Q8N239 644 aa25.17■■□□□ 1.62
PCGF3-208ENST00000470161 EIF5P55010 431 aaKnown RBP25.17■■□□□ 1.62
PCGF3-208ENST00000470161 IFT57Q9NWB7 429 aa25.16■■□□□ 1.62
PCGF3-208ENST00000470161 SRP68Q9UHB9 627 aaKnown RBP25.16■■□□□ 1.62
PCGF3-208ENST00000470161 USP42Q9H9J4 1324 aaKnown RBP25.15■■□□□ 1.62
PCGF3-208ENST00000470161 GYS1P13807 737 aa25.15■■□□□ 1.62
PCGF3-208ENST00000470161 NCBP3Q53F19 620 aaKnown RBP25.15■■□□□ 1.62
PCGF3-208ENST00000470161 WWC1Q8IX03 1113 aa25.15■■□□□ 1.62
PCGF3-208ENST00000470161 PIP4K2AP48426 406 aaPredicted RBP25.14■■□□□ 1.62
PCGF3-208ENST00000470161 NARFQ9UHQ1 456 aa25.14■■□□□ 1.62
PCGF3-208ENST00000470161 USPL1Q5W0Q7 1092 aa25.13■■□□□ 1.61
PCGF3-208ENST00000470161 FHDC1Q9C0D6 1143 aaPredicted RBP25.13■■□□□ 1.61
PCGF3-208ENST00000470161 EIF2S2P20042 333 aaKnown RBP25.13■■□□□ 1.61
PCGF3-208ENST00000470161 MMP10P09238 476 aa25.12■■□□□ 1.61
PCGF3-208ENST00000470161 NGEFQ8N5V2 710 aa25.12■■□□□ 1.61
PCGF3-208ENST00000470161 MBIPQ9NS73 344 aa25.12■■□□□ 1.61
PCGF3-208ENST00000470161 TBC1D2BQ9UPU7 963 aa25.11■■□□□ 1.61
PCGF3-208ENST00000470161 ZNF853P0CG23 659 aa25.1■■□□□ 1.61
PCGF3-208ENST00000470161 FKBP8Q14318 412 aa25.1■■□□□ 1.61
PCGF3-208ENST00000470161 SYT17Q9BSW7 474 aa25.1■■□□□ 1.61
PCGF3-208ENST00000470161 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
PCGF3-208ENST00000470161 C4AP0C0L4 1744 aa25.09■■□□□ 1.61
PCGF3-208ENST00000470161 DZIP3Q86Y13 1208 aaKnown RBP25.09■■□□□ 1.61
PCGF3-208ENST00000470161 NBPF26B4DH59 902 aa25.08■■□□□ 1.61
PCGF3-208ENST00000470161 NBPF10Q6P3W6 841 aaKnown RBP25.08■■□□□ 1.61
PCGF3-208ENST00000470161 NBPF15Q8N660 670 aa25.08■■□□□ 1.61
PCGF3-208ENST00000470161 COL24A1Q17RW2 1714 aa25.07■■□□□ 1.6
PCGF3-208ENST00000470161 MYL6BP14649 208 aa25.07■■□□□ 1.6
PCGF3-208ENST00000470161 KRT24Q2M2I5 525 aa25.07■■□□□ 1.6
PCGF3-208ENST00000470161 NECTIN2Q92692 538 aa25.07■■□□□ 1.6
PCGF3-208ENST00000470161 WDR63Q8IWG1 891 aa25.06■■□□□ 1.6
PCGF3-208ENST00000470161 IL16Q14005 1332 aa25.06■■□□□ 1.6
PCGF3-208ENST00000470161 ERBB4Q15303 1308 aa25.06■■□□□ 1.6
PCGF3-208ENST00000470161 LAMB4A4D0S4 1761 aa25.05■■□□□ 1.6
PCGF3-208ENST00000470161 DCAF8L1A6NGE4 600 aa25.05■■□□□ 1.6
PCGF3-208ENST00000470161 HOXB7P09629 217 aa25.05■■□□□ 1.6
PCGF3-208ENST00000470161 DUSP27Q5VZP5 1158 aa25.04■■□□□ 1.6
PCGF3-208ENST00000470161 HDGFL1Q5TGJ6 251 aa25.04■■□□□ 1.6
PCGF3-208ENST00000470161 BICDL1Q6ZP65 573 aa25.03■■□□□ 1.6
PCGF3-208ENST00000470161 ZNF652Q9Y2D9 606 aa25.03■■□□□ 1.6
PCGF3-208ENST00000470161 CD2APQ9Y5K6 639 aa25.03■■□□□ 1.6
PCGF3-208ENST00000470161 ELL2O00472 640 aaPredicted RBP25.02■■□□□ 1.6
PCGF3-208ENST00000470161 TSR2Q969E8 191 aaKnown RBP25.02■■□□□ 1.6
PCGF3-208ENST00000470161 CHMP4AQ9BY43 222 aa25.02■■□□□ 1.6
PCGF3-208ENST00000470161 CAMTA2O94983 1202 aa25.01■■□□□ 1.59
PCGF3-208ENST00000470161 TM4SF1P30408 202 aa25.01■■□□□ 1.59
PCGF3-208ENST00000470161 KIF6Q6ZMV9 814 aa25.01■■□□□ 1.59
PCGF3-208ENST00000470161 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
PCGF3-208ENST00000470161 NFIXQ14938 502 aa25.01■■□□□ 1.59
PCGF3-208ENST00000470161 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
PCGF3-208ENST00000470161 DDR1Q08345 913 aa24.98■■□□□ 1.59
PCGF3-208ENST00000470161 C8orf58Q8NAV2 365 aa24.98■■□□□ 1.59
PCGF3-208ENST00000470161 SETDB2Q96T68 719 aa24.98■■□□□ 1.59
PCGF3-208ENST00000470161 POLRMTO00411 1230 aaKnown RBP24.97■■□□□ 1.59
PCGF3-208ENST00000470161 ANXA1P04083 346 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 TBC1D9BQ66K14 1250 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 DDX21Q9NR30 783 aaKnown RBP eCLIP24.97■■□□□ 1.59
PCGF3-208ENST00000470161 DBF4Q9UBU7 674 aaPredicted RBP24.97■■□□□ 1.59
PCGF3-208ENST00000470161 NPHP1O15259 732 aa24.97■■□□□ 1.59
PCGF3-208ENST00000470161 GOLGA2Q08379 1002 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms