RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 KCNQ3O43525 872 aa10.89□□□□□ -0.67
TRAPPC3-206ENST00000469757 RPS6KA4O75676 772 aa10.89□□□□□ -0.67
TRAPPC3-206ENST00000469757 NGEFQ8N5V2 710 aa10.89□□□□□ -0.67
TRAPPC3-206ENST00000469757 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-206ENST00000469757 CHL1O00533 1208 aa10.88□□□□□ -0.67
TRAPPC3-206ENST00000469757 STARD3NLO95772 234 aa10.88□□□□□ -0.67
TRAPPC3-206ENST00000469757 SNRPA1P09661 255 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-206ENST00000469757 ZNF853P0CG23 659 aa10.88□□□□□ -0.67
TRAPPC3-206ENST00000469757 RTCBQ9Y3I0 505 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-206ENST00000469757 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 ZBTB7AO95365 584 aa10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 EIF4A1P60842 406 aaKnown RBP10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 IFT57Q9NWB7 429 aa10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 ZBTB1Q9Y2K1 713 aa10.87□□□□□ -0.67
TRAPPC3-206ENST00000469757 IL16Q14005 1332 aa10.86□□□□□ -0.67
TRAPPC3-206ENST00000469757 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
TRAPPC3-206ENST00000469757 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC3-206ENST00000469757 PHF14O94880 888 aa10.86□□□□□ -0.67
TRAPPC3-206ENST00000469757 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
TRAPPC3-206ENST00000469757 ZNF521Q96K83 1311 aa10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 C10orf71Q711Q0 1435 aa10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 RGL2O15211 777 aa10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 HOXB7P09629 217 aa10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 IL6STP40189 918 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 EIF5P55010 431 aaKnown RBP10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
TRAPPC3-206ENST00000469757 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
TRAPPC3-206ENST00000469757 GYS1P13807 737 aa10.84□□□□□ -0.67
TRAPPC3-206ENST00000469757 TRAPPC3LQ5T215 181 aa10.84□□□□□ -0.67
TRAPPC3-206ENST00000469757 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-206ENST00000469757 MBIPQ9NS73 344 aa10.84□□□□□ -0.67
TRAPPC3-206ENST00000469757 MIS18AQ9NYP9 233 aa10.84□□□□□ -0.67
TRAPPC3-206ENST00000469757 NBPF26B4DH59 902 aa10.83□□□□□ -0.68
TRAPPC3-206ENST00000469757 GNAI1P63096 354 aa10.83□□□□□ -0.68
TRAPPC3-206ENST00000469757 NBPF10Q6P3W6 841 aaKnown RBP10.83□□□□□ -0.68
TRAPPC3-206ENST00000469757 SMIM5Q71RC9 77 aa10.83□□□□□ -0.68
TRAPPC3-206ENST00000469757 NBPF15Q8N660 670 aa10.83□□□□□ -0.68
TRAPPC3-206ENST00000469757 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
TRAPPC3-206ENST00000469757 ANKRD36CQ5JPF3 1778 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 DLEC1Q9Y238 1755 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 A0A087WZG4 1122 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 POLD1P28340 1107 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 RFC4P35249 363 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 LRP10Q7Z4F1 713 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 NARFQ9UHQ1 456 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
TRAPPC3-206ENST00000469757 BRCA1P38398 1863 aaKnown RBP10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 A1BGP04217 495 aa10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 MSL1Q68DK7 614 aa10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 WDR63Q8IWG1 891 aa10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 NLGN1Q8N2Q7 840 aa10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 ARXQ96QS3 562 aa10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 AFDNP55196 1824 aaKnown RBP10.81□□□□□ -0.68
TRAPPC3-206ENST00000469757 MSH5O43196 834 aa10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 CAMTA2O94983 1202 aa10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 CANXP27824 592 aaKnown RBP10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 PDIA6Q15084 440 aa10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 MIER1Q8N108 512 aa10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 SRP68Q9UHB9 627 aaKnown RBP10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
TRAPPC3-206ENST00000469757 IBTKQ9P2D0 1353 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC3-206ENST00000469757 MMP10P09238 476 aa10.79□□□□□ -0.68
TRAPPC3-206ENST00000469757 FKBP8Q14318 412 aa10.79□□□□□ -0.68
TRAPPC3-206ENST00000469757 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
TRAPPC3-206ENST00000469757 PXDNLA1KZ92 1463 aa10.79□□□□□ -0.68
TRAPPC3-206ENST00000469757 ANKRD31Q8N7Z5 1873 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 CARMIL3Q8ND23 1372 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 COL11A2P13942 1736 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 ZPR1O75312 459 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 TM4SF1P30408 202 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 DDR1Q08345 913 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 CD2APQ9Y5K6 639 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 NUP98P52948 1817 aa10.78□□□□□ -0.68
TRAPPC3-206ENST00000469757 RIC1Q4ADV7 1423 aa10.77□□□□□ -0.68
TRAPPC3-206ENST00000469757 POLRMTO00411 1230 aaKnown RBP10.77□□□□□ -0.69
TRAPPC3-206ENST00000469757 DUSP27Q5VZP5 1158 aa10.77□□□□□ -0.69
TRAPPC3-206ENST00000469757 CLEC4GQ6UXB4 293 aa10.77□□□□□ -0.69
TRAPPC3-206ENST00000469757 DZIP3Q86Y13 1208 aaKnown RBP10.77□□□□□ -0.69
TRAPPC3-206ENST00000469757 LAS1LQ9Y4W2 734 aaKnown RBP10.77□□□□□ -0.69
TRAPPC3-206ENST00000469757 LAMB2P55268 1798 aa10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 ERVV-1B6SEH8 477 aa10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 NFIXQ14938 502 aa10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 HDGFL1Q5TGJ6 251 aa10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 TSR2Q969E8 191 aaKnown RBP10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 SYT17Q9BSW7 474 aa10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 DDX21Q9NR30 783 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRAPPC3-206ENST00000469757 MAP3K15Q6ZN16 1313 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms