RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
SMARCD3-205ENST00000469154 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 SOS1Q07889 1333 aaPredicted RBP17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 COL18A1P39060 1754 aa17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 F6X3S4 739 aa17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 MCTP1Q6DN14 999 aa17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
SMARCD3-205ENST00000469154 GNAI3P08754 354 aa17.35■□□□□ 0.37
SMARCD3-205ENST00000469154 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
SMARCD3-205ENST00000469154 ZNF445P59923 1031 aa17.35■□□□□ 0.37
SMARCD3-205ENST00000469154 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
SMARCD3-205ENST00000469154 SALL3Q9BXA9 1300 aa17.34■□□□□ 0.37
SMARCD3-205ENST00000469154 COL22A1Q8NFW1 1626 aaPredicted RBP17.34■□□□□ 0.37
SMARCD3-205ENST00000469154 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
SMARCD3-205ENST00000469154 NASPP49321 788 aaPredicted RBP17.33■□□□□ 0.37
SMARCD3-205ENST00000469154 ANP32BQ92688 251 aaKnown RBP17.33■□□□□ 0.37
SMARCD3-205ENST00000469154 LMBRD1Q9NUN5 540 aa17.33■□□□□ 0.37
SMARCD3-205ENST00000469154 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
SMARCD3-205ENST00000469154 HSPA1LP34931 641 aa17.33■□□□□ 0.36
SMARCD3-205ENST00000469154 MCM2P49736 904 aa17.33■□□□□ 0.36
SMARCD3-205ENST00000469154 PPP1R9BQ96SB3 815 aa17.33■□□□□ 0.36
SMARCD3-205ENST00000469154 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
SMARCD3-205ENST00000469154 RGPD2P0DJD1 1756 aa17.33■□□□□ 0.36
SMARCD3-205ENST00000469154 MCCP23508 829 aa17.32■□□□□ 0.36
SMARCD3-205ENST00000469154 FLIIQ13045 1269 aa17.32■□□□□ 0.36
SMARCD3-205ENST00000469154 NAP1L5Q96NT1 182 aaPredicted RBP17.32■□□□□ 0.36
SMARCD3-205ENST00000469154 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
SMARCD3-205ENST00000469154 ABCC6O95255 1503 aa17.32■□□□□ 0.36
SMARCD3-205ENST00000469154 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 EXOC6BQ9Y2D4 811 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 MX1P20591 662 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 ATP8B2P98198 1209 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 BTG4Q9NY30 223 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 JCADQ9P266 1359 aa17.31■□□□□ 0.36
SMARCD3-205ENST00000469154 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
SMARCD3-205ENST00000469154 EVA1CP58658 441 aa17.3■□□□□ 0.36
SMARCD3-205ENST00000469154 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
SMARCD3-205ENST00000469154 SRCIN1Q9C0H9 1055 aa17.3■□□□□ 0.36
SMARCD3-205ENST00000469154 PKP1Q13835 747 aa17.3■□□□□ 0.36
SMARCD3-205ENST00000469154 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
SMARCD3-205ENST00000469154 COL5A2P05997 1499 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 MAP3K5Q99683 1374 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 AOX1Q06278 1338 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 ANAPC15P60006 121 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 CAVIN1Q6NZI2 390 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 STAP2Q9UGK3 403 aa17.29■□□□□ 0.36
SMARCD3-205ENST00000469154 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
SMARCD3-205ENST00000469154 NEK4P51957 841 aa17.28■□□□□ 0.36
SMARCD3-205ENST00000469154 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
SMARCD3-205ENST00000469154 ZDHHC9Q9Y397 364 aa17.28■□□□□ 0.36
SMARCD3-205ENST00000469154 NCAPD2Q15021 1401 aa17.27■□□□□ 0.36
SMARCD3-205ENST00000469154 PNMA6EA0A0J9YXQ4 647 aa17.27■□□□□ 0.35
SMARCD3-205ENST00000469154 TMX3Q96JJ7 454 aa17.27■□□□□ 0.35
SMARCD3-205ENST00000469154 PRPF40AO75400 957 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-205ENST00000469154 CHMLP26374 656 aa17.26■□□□□ 0.35
SMARCD3-205ENST00000469154 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
SMARCD3-205ENST00000469154 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
SMARCD3-205ENST00000469154 CUL4AQ13619 759 aa17.26■□□□□ 0.35
SMARCD3-205ENST00000469154 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
SMARCD3-205ENST00000469154 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-205ENST00000469154 TRIM6-TRIM34B2RNG4 842 aa17.25■□□□□ 0.35
SMARCD3-205ENST00000469154 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
SMARCD3-205ENST00000469154 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
SMARCD3-205ENST00000469154 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
SMARCD3-205ENST00000469154 COL14A1Q05707 1796 aaKnown RBP17.24■□□□□ 0.35
SMARCD3-205ENST00000469154 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
SMARCD3-205ENST00000469154 RILPL2Q969X0 211 aa17.24■□□□□ 0.35
SMARCD3-205ENST00000469154 MBD3O95983 291 aa17.23■□□□□ 0.35
SMARCD3-205ENST00000469154 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
SMARCD3-205ENST00000469154 ANO2Q9NQ90 1003 aa17.23■□□□□ 0.35
SMARCD3-205ENST00000469154 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
SMARCD3-205ENST00000469154 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
SMARCD3-205ENST00000469154 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 BRD1O95696 1058 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 SPATA31A6Q5VVP1 1343 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 HS1BP3Q53T59 392 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 C8orf37Q96NL8 207 aa17.22■□□□□ 0.35
SMARCD3-205ENST00000469154 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
SMARCD3-205ENST00000469154 PALD1Q9ULE6 856 aa17.21■□□□□ 0.35
SMARCD3-205ENST00000469154 MEGF6O75095 1541 aa17.21■□□□□ 0.35
SMARCD3-205ENST00000469154 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
SMARCD3-205ENST00000469154 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
SMARCD3-205ENST00000469154 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
SMARCD3-205ENST00000469154 NGLY1Q96IV0 654 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms