RNA–Protein interactions for RNA: ENST00000469066.1

BRPF1-207, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-207ENST00000469066 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
BRPF1-207ENST00000469066 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
BRPF1-207ENST00000469066 CD2APQ9Y5K6 639 aa12.68□□□□□ -0.38
BRPF1-207ENST00000469066 SIPA1L3O60292 1781 aaPredicted RBP12.68□□□□□ -0.38
BRPF1-207ENST00000469066 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
BRPF1-207ENST00000469066 CHL1O00533 1208 aa12.67□□□□□ -0.38
BRPF1-207ENST00000469066 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
BRPF1-207ENST00000469066 STARD3NLO95772 234 aa12.67□□□□□ -0.38
BRPF1-207ENST00000469066 A1BGP04217 495 aa12.67□□□□□ -0.38
BRPF1-207ENST00000469066 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
BRPF1-207ENST00000469066 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
BRPF1-207ENST00000469066 TJP1Q07157 1748 aa12.67□□□□□ -0.38
BRPF1-207ENST00000469066 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
BRPF1-207ENST00000469066 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
BRPF1-207ENST00000469066 RFC4P35249 363 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
BRPF1-207ENST00000469066 FKBP8Q14318 412 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
BRPF1-207ENST00000469066 CCDC146Q8IYE0 955 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 NBPF15Q8N660 670 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 SRP68Q9UHB9 627 aaKnown RBP12.66□□□□□ -0.38
BRPF1-207ENST00000469066 UBR2Q8IWV8 1755 aa12.66□□□□□ -0.38
BRPF1-207ENST00000469066 ZNF853P0CG23 659 aa12.65□□□□□ -0.38
BRPF1-207ENST00000469066 NCBP3Q53F19 620 aaKnown RBP12.65□□□□□ -0.38
BRPF1-207ENST00000469066 NEFMP07197 916 aa12.64□□□□□ -0.39
BRPF1-207ENST00000469066 MMP10P09238 476 aa12.64□□□□□ -0.39
BRPF1-207ENST00000469066 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
BRPF1-207ENST00000469066 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
BRPF1-207ENST00000469066 APAF1O14727 1248 aa12.63□□□□□ -0.39
BRPF1-207ENST00000469066 KCNA3P22001 575 aa12.63□□□□□ -0.39
BRPF1-207ENST00000469066 CANXP27824 592 aaKnown RBP12.63□□□□□ -0.39
BRPF1-207ENST00000469066 DDR1Q08345 913 aa12.63□□□□□ -0.39
BRPF1-207ENST00000469066 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.39
BRPF1-207ENST00000469066 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
BRPF1-207ENST00000469066 LRP10Q7Z4F1 713 aa12.63□□□□□ -0.39
BRPF1-207ENST00000469066 POLRMTO00411 1230 aaKnown RBP12.62□□□□□ -0.39
BRPF1-207ENST00000469066 PDIA6Q15084 440 aa12.62□□□□□ -0.39
BRPF1-207ENST00000469066 VIRMAQ69YN4 1812 aaKnown RBP12.61□□□□□ -0.39
BRPF1-207ENST00000469066 A0A087WZG4 1122 aa12.61□□□□□ -0.39
BRPF1-207ENST00000469066 RGL2O15211 777 aa12.61□□□□□ -0.39
BRPF1-207ENST00000469066 CAMTA2O94983 1202 aa12.61□□□□□ -0.39
BRPF1-207ENST00000469066 NFIXQ14938 502 aa12.61□□□□□ -0.39
BRPF1-207ENST00000469066 COL15A1P39059 1388 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 ANP32CO43423 234 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 ZPR1O75312 459 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 TGFB2P61812 414 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 NEUROD2Q15784 382 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 TBC1D2BQ9UPU7 963 aa12.6□□□□□ -0.39
BRPF1-207ENST00000469066 YBX3P16989 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRPF1-207ENST00000469066 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
BRPF1-207ENST00000469066 CLEC4GQ6UXB4 293 aa12.59□□□□□ -0.39
BRPF1-207ENST00000469066 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.39
BRPF1-207ENST00000469066 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
BRPF1-207ENST00000469066 TSPYL4Q9UJ04 414 aa12.58□□□□□ -0.4
BRPF1-207ENST00000469066 PARP3Q9Y6F1 533 aa12.58□□□□□ -0.4
BRPF1-207ENST00000469066 TBC1D9BQ66K14 1250 aa12.57□□□□□ -0.4
BRPF1-207ENST00000469066 A0A0G2JLW4 131 aa12.56□□□□□ -0.4
BRPF1-207ENST00000469066 SERPINB2P05120 415 aa12.56□□□□□ -0.4
BRPF1-207ENST00000469066 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
BRPF1-207ENST00000469066 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
BRPF1-207ENST00000469066 MRS2Q9HD23 443 aa12.56□□□□□ -0.4
BRPF1-207ENST00000469066 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
BRPF1-207ENST00000469066 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
BRPF1-207ENST00000469066 HLFQ16534 295 aa12.55□□□□□ -0.4
BRPF1-207ENST00000469066 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
BRPF1-207ENST00000469066 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
BRPF1-207ENST00000469066 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
BRPF1-207ENST00000469066 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
BRPF1-207ENST00000469066 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
BRPF1-207ENST00000469066 KLRG2A4D1S0 409 aaPredicted RBP12.54□□□□□ -0.4
BRPF1-207ENST00000469066 DPEP1P16444 411 aa12.54□□□□□ -0.4
BRPF1-207ENST00000469066 TTLL7Q6ZT98 887 aa12.54□□□□□ -0.4
BRPF1-207ENST00000469066 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
BRPF1-207ENST00000469066 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
BRPF1-207ENST00000469066 GRIN3BO60391 1043 aa12.53□□□□□ -0.4
BRPF1-207ENST00000469066 HOXB7P09629 217 aa12.53□□□□□ -0.4
BRPF1-207ENST00000469066 GPR162Q16538 588 aa12.53□□□□□ -0.4
BRPF1-207ENST00000469066 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
BRPF1-207ENST00000469066 GNAI1P63096 354 aa12.52□□□□□ -0.41
BRPF1-207ENST00000469066 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
BRPF1-207ENST00000469066 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.41
BRPF1-207ENST00000469066 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
BRPF1-207ENST00000469066 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 SETDB2Q96T68 719 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
BRPF1-207ENST00000469066 IL16Q14005 1332 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 KIAA1551Q9HCM1 1747 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
BRPF1-207ENST00000469066 EIF2S2P20042 333 aaKnown RBP12.5□□□□□ -0.41
BRPF1-207ENST00000469066 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
BRPF1-207ENST00000469066 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
BRPF1-207ENST00000469066 GIGYF2Q6Y7W6 1299 aaKnown RBP12.5□□□□□ -0.41
BRPF1-207ENST00000469066 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms