RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 TERF2IPQ9NYB0 399 aa15.07■□□□□ 0
TRAIP-202ENST00000469027 USP42Q9H9J4 1324 aaKnown RBP15.07■□□□□ 0
TRAIP-202ENST00000469027 KDRP35968 1356 aa15.07■□□□□ 0
TRAIP-202ENST00000469027 NKX1-1Q15270 411 aaPredicted RBP15.06■□□□□ 0
TRAIP-202ENST00000469027 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
TRAIP-202ENST00000469027 CNTROBQ8N137 903 aa15.06■□□□□ 0
TRAIP-202ENST00000469027 GCC1Q96CN9 775 aa15.06■□□□□ 0
TRAIP-202ENST00000469027 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
TRAIP-202ENST00000469027 SPG7Q9UQ90 795 aa15.06■□□□□ 0
TRAIP-202ENST00000469027 SLC4A9Q96Q91 983 aa15.05■□□□□ -0
TRAIP-202ENST00000469027 A0A1W2PP64 1363 aa15.05■□□□□ -0
TRAIP-202ENST00000469027 THSD7BQ9C0I4 1608 aa15.05■□□□□ -0
TRAIP-202ENST00000469027 SCN4AP35499 1836 aa15.05■□□□□ -0
TRAIP-202ENST00000469027 DLEC1Q9Y238 1755 aa15.04■□□□□ -0
TRAIP-202ENST00000469027 LTBP1Q14766 1721 aa15.04■□□□□ -0
TRAIP-202ENST00000469027 H0YIN7 160 aa15.04■□□□□ -0
TRAIP-202ENST00000469027 C21orf2O43822 256 aa15.04■□□□□ -0
TRAIP-202ENST00000469027 COL5A3P25940 1745 aaPredicted RBP15.03■□□□□ -0
TRAIP-202ENST00000469027 CA12O43570 354 aa15.03■□□□□ -0
TRAIP-202ENST00000469027 ZPR1O75312 459 aa15.03■□□□□ -0
TRAIP-202ENST00000469027 ZNF622Q969S3 477 aaKnown RBP eCLIP15.03■□□□□ -0
TRAIP-202ENST00000469027 TAOK3Q9H2K8 898 aa15.03■□□□□ -0
TRAIP-202ENST00000469027 HACL1Q9UJ83 578 aa15.03■□□□□ -0
TRAIP-202ENST00000469027 MYH14Q7Z406 1995 aaKnown RBP15.03■□□□□ -0
TRAIP-202ENST00000469027 AOC2O75106 756 aa15.02■□□□□ -0
TRAIP-202ENST00000469027 TM4SF1P30408 202 aa15.02■□□□□ -0
TRAIP-202ENST00000469027 CRKLP46109 303 aaKnown RBP15.02■□□□□ -0
TRAIP-202ENST00000469027 L3MBTL3Q96JM7 780 aaPredicted RBP15.02■□□□□ -0
TRAIP-202ENST00000469027 EPHX2P34913 555 aa15.01□□□□□ -0.01
TRAIP-202ENST00000469027 DDX21Q9NR30 783 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAIP-202ENST00000469027 HSP90AB2PQ58FF8 381 aa15□□□□□ -0.01
TRAIP-202ENST00000469027 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
TRAIP-202ENST00000469027 PNMA8AQ86V59 439 aaPredicted RBP15□□□□□ -0.01
TRAIP-202ENST00000469027 NBPF15Q8N660 670 aa15□□□□□ -0.01
TRAIP-202ENST00000469027 AFDNP55196 1824 aaKnown RBP15□□□□□ -0.01
TRAIP-202ENST00000469027 MAP2K2P36507 400 aa14.99□□□□□ -0.01
TRAIP-202ENST00000469027 IFNL2Q8IZJ0 200 aa14.99□□□□□ -0.01
TRAIP-202ENST00000469027 ZNF831Q5JPB2 1677 aa14.99□□□□□ -0.01
TRAIP-202ENST00000469027 FER1L6Q2WGJ9 1857 aa14.99□□□□□ -0.01
TRAIP-202ENST00000469027 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
TRAIP-202ENST00000469027 SERPINB2P05120 415 aa14.98□□□□□ -0.01
TRAIP-202ENST00000469027 NFIXQ14938 502 aa14.98□□□□□ -0.01
TRAIP-202ENST00000469027 HABP4Q5JVS0 413 aaKnown RBP14.98□□□□□ -0.01
TRAIP-202ENST00000469027 INSRP06213 1382 aa14.98□□□□□ -0.01
TRAIP-202ENST00000469027 RNF123Q5XPI4 1314 aa14.97□□□□□ -0.01
TRAIP-202ENST00000469027 LTBP3Q9NS15 1303 aa14.97□□□□□ -0.01
TRAIP-202ENST00000469027 PTCD1O75127 700 aaKnown RBP14.97□□□□□ -0.01
TRAIP-202ENST00000469027 PHKG2P15735 406 aa14.97□□□□□ -0.01
TRAIP-202ENST00000469027 ADAMTSL1Q8N6G6 1762 aa14.96□□□□□ -0.01
TRAIP-202ENST00000469027 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRAIP-202ENST00000469027 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
TRAIP-202ENST00000469027 FLT4P35916 1363 aa14.95□□□□□ -0.02
TRAIP-202ENST00000469027 ZNF541Q9H0D2 1346 aa14.94□□□□□ -0.02
TRAIP-202ENST00000469027 TLL2Q9Y6L7 1015 aa14.94□□□□□ -0.02
TRAIP-202ENST00000469027 NRXN2Q9P2S2 1712 aa14.93□□□□□ -0.02
TRAIP-202ENST00000469027 DLL1O00548 723 aa14.93□□□□□ -0.02
TRAIP-202ENST00000469027 BRPF1P55201 1214 aaPredicted RBP14.93□□□□□ -0.02
TRAIP-202ENST00000469027 CIAPIN1Q6FI81 312 aa14.93□□□□□ -0.02
TRAIP-202ENST00000469027 BICDL1Q6ZP65 573 aa14.92□□□□□ -0.02
TRAIP-202ENST00000469027 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
TRAIP-202ENST00000469027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRAIP-202ENST00000469027 ERVV-2B6SEH9 535 aa14.91□□□□□ -0.02
TRAIP-202ENST00000469027 CABP4P57796 275 aa14.91□□□□□ -0.02
TRAIP-202ENST00000469027 SOGA3Q5TF21 947 aa14.91□□□□□ -0.02
TRAIP-202ENST00000469027 TRAF5O00463 557 aa14.9□□□□□ -0.02
TRAIP-202ENST00000469027 PDE6BP35913 854 aa14.9□□□□□ -0.02
TRAIP-202ENST00000469027 CACNA1SQ13698 1873 aa14.9□□□□□ -0.02
TRAIP-202ENST00000469027 TRPM7Q96QT4 1865 aa14.9□□□□□ -0.02
TRAIP-202ENST00000469027 CST9Q5W186 159 aa14.89□□□□□ -0.03
TRAIP-202ENST00000469027 INTS5Q6P9B9 1019 aaKnown RBP14.89□□□□□ -0.03
TRAIP-202ENST00000469027 CCDC24Q8N4L8 307 aa14.89□□□□□ -0.03
TRAIP-202ENST00000469027 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
TRAIP-202ENST00000469027 ADAMTS7Q9UKP4 1686 aa14.88□□□□□ -0.03
TRAIP-202ENST00000469027 NPHP1O15259 732 aa14.88□□□□□ -0.03
TRAIP-202ENST00000469027 PPM1GO15355 546 aaPredicted RBP14.88□□□□□ -0.03
TRAIP-202ENST00000469027 LMOD1P29536 600 aaPredicted RBP14.88□□□□□ -0.03
TRAIP-202ENST00000469027 PRPF40BQ6NWY9 871 aaKnown RBP14.88□□□□□ -0.03
TRAIP-202ENST00000469027 CNKSR1Q969H4 720 aa14.88□□□□□ -0.03
TRAIP-202ENST00000469027 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
TRAIP-202ENST00000469027 COL11A2P13942 1736 aaPredicted RBP14.87□□□□□ -0.03
TRAIP-202ENST00000469027 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
TRAIP-202ENST00000469027 SOS1Q07889 1333 aaPredicted RBP14.87□□□□□ -0.03
TRAIP-202ENST00000469027 COL15A1P39059 1388 aa14.86□□□□□ -0.03
TRAIP-202ENST00000469027 CELF2O95319 508 aaKnown RBP14.86□□□□□ -0.03
TRAIP-202ENST00000469027 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
TRAIP-202ENST00000469027 FXR1P51114 621 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAIP-202ENST00000469027 SAPCD2Q86UD0 394 aa14.86□□□□□ -0.03
TRAIP-202ENST00000469027 BRIP1Q9BX63 1249 aa14.86□□□□□ -0.03
TRAIP-202ENST00000469027 SLX4Q8IY92 1834 aa14.86□□□□□ -0.03
TRAIP-202ENST00000469027 ANKRD31Q8N7Z5 1873 aa14.86□□□□□ -0.03
TRAIP-202ENST00000469027 TJP1Q07157 1748 aa14.86□□□□□ -0.03
TRAIP-202ENST00000469027 KIF24Q5T7B8 1368 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 TONSLQ96HA7 1378 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 NCAPD2Q15021 1401 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 CCDC93Q567U6 631 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 GPC2Q8N158 579 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 EMILIN1Q9Y6C2 1016 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 GJA3Q9Y6H8 435 aa14.85□□□□□ -0.03
TRAIP-202ENST00000469027 FYB1O15117 783 aa14.84□□□□□ -0.03
TRAIP-202ENST00000469027 L3MBTL2Q969R5 705 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms