RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
SCAP-210ENST00000468965 SOCS7O14512 581 aa16.97■□□□□ 0.31
SCAP-210ENST00000468965 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
SCAP-210ENST00000468965 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.3
SCAP-210ENST00000468965 HOXB7P09629 217 aa16.95■□□□□ 0.3
SCAP-210ENST00000468965 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
SCAP-210ENST00000468965 ANO8Q9HCE9 1232 aaPredicted RBP16.95■□□□□ 0.3
SCAP-210ENST00000468965 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
SCAP-210ENST00000468965 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
SCAP-210ENST00000468965 CNTNAP4Q9C0A0 1308 aa16.94■□□□□ 0.3
SCAP-210ENST00000468965 VAMP4O75379 141 aa16.93■□□□□ 0.3
SCAP-210ENST00000468965 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
SCAP-210ENST00000468965 ZNF827Q17R98 1081 aa16.93■□□□□ 0.3
SCAP-210ENST00000468965 INTS5Q6P9B9 1019 aaKnown RBP16.93■□□□□ 0.3
SCAP-210ENST00000468965 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
SCAP-210ENST00000468965 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
SCAP-210ENST00000468965 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
SCAP-210ENST00000468965 STARD3NLO95772 234 aa16.92■□□□□ 0.3
SCAP-210ENST00000468965 A1BGP04217 495 aa16.92■□□□□ 0.3
SCAP-210ENST00000468965 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
SCAP-210ENST00000468965 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
SCAP-210ENST00000468965 NECTIN2Q92692 538 aa16.92■□□□□ 0.3
SCAP-210ENST00000468965 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
SCAP-210ENST00000468965 ZBTB1Q9Y2K1 713 aa16.92■□□□□ 0.3
SCAP-210ENST00000468965 NBPF26B4DH59 902 aa16.91■□□□□ 0.3
SCAP-210ENST00000468965 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
SCAP-210ENST00000468965 PIP4K2AP48426 406 aaPredicted RBP16.91■□□□□ 0.3
SCAP-210ENST00000468965 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
SCAP-210ENST00000468965 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
SCAP-210ENST00000468965 NBPF10Q6P3W6 841 aaKnown RBP16.91■□□□□ 0.3
SCAP-210ENST00000468965 NBPF15Q8N660 670 aa16.91■□□□□ 0.3
SCAP-210ENST00000468965 PDIA6Q15084 440 aa16.9■□□□□ 0.3
SCAP-210ENST00000468965 SMIM5Q71RC9 77 aa16.9■□□□□ 0.3
SCAP-210ENST00000468965 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
SCAP-210ENST00000468965 AK7Q96M32 723 aa16.89■□□□□ 0.29
SCAP-210ENST00000468965 TCERG1O14776 1098 aaKnown RBP16.88■□□□□ 0.29
SCAP-210ENST00000468965 GNPATO15228 680 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 RPS6KA4O75676 772 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 ANXA1P04083 346 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
SCAP-210ENST00000468965 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 LRP10Q7Z4F1 713 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 STK32BQ9NY57 414 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 ERBB4Q15303 1308 aa16.88■□□□□ 0.29
SCAP-210ENST00000468965 BCORQ6W2J9 1755 aa16.87■□□□□ 0.29
SCAP-210ENST00000468965 HMGB2P26583 209 aaKnown RBP16.87■□□□□ 0.29
SCAP-210ENST00000468965 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
SCAP-210ENST00000468965 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
SCAP-210ENST00000468965 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SCAP-210ENST00000468965 DDX21Q9NR30 783 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCAP-210ENST00000468965 PNPLA7Q6ZV29 1317 aa16.86■□□□□ 0.29
SCAP-210ENST00000468965 CASZ1Q86V15 1759 aa16.86■□□□□ 0.29
SCAP-210ENST00000468965 COL15A1P39059 1388 aa16.86■□□□□ 0.29
SCAP-210ENST00000468965 NUP98P52948 1817 aa16.85■□□□□ 0.29
SCAP-210ENST00000468965 MYL6BP14649 208 aa16.85■□□□□ 0.29
SCAP-210ENST00000468965 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
SCAP-210ENST00000468965 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
SCAP-210ENST00000468965 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
SCAP-210ENST00000468965 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
SCAP-210ENST00000468965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
SCAP-210ENST00000468965 PHF14O94880 888 aa16.84■□□□□ 0.29
SCAP-210ENST00000468965 SSFA2P28290 1259 aa16.84■□□□□ 0.29
SCAP-210ENST00000468965 DBF4Q9UBU7 674 aaPredicted RBP16.84■□□□□ 0.29
SCAP-210ENST00000468965 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
SCAP-210ENST00000468965 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
SCAP-210ENST00000468965 ARFGEF2Q9Y6D5 1785 aa16.83■□□□□ 0.28
SCAP-210ENST00000468965 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
SCAP-210ENST00000468965 G2E3Q7L622 706 aa16.82■□□□□ 0.28
SCAP-210ENST00000468965 COL23A1Q86Y22 540 aaPredicted RBP16.82■□□□□ 0.28
SCAP-210ENST00000468965 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
SCAP-210ENST00000468965 ZNF428Q96B54 188 aa16.82■□□□□ 0.28
SCAP-210ENST00000468965 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
SCAP-210ENST00000468965 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
SCAP-210ENST00000468965 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
SCAP-210ENST00000468965 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
SCAP-210ENST00000468965 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
SCAP-210ENST00000468965 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SCAP-210ENST00000468965 R3HDM1Q15032 1099 aaKnown RBP16.81■□□□□ 0.28
SCAP-210ENST00000468965 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
SCAP-210ENST00000468965 TTLL7Q6ZT98 887 aa16.81■□□□□ 0.28
SCAP-210ENST00000468965 MRPL50Q8N5N7 158 aaKnown RBP16.81■□□□□ 0.28
SCAP-210ENST00000468965 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
SCAP-210ENST00000468965 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
SCAP-210ENST00000468965 HYPKQ9NX55 129 aa16.81■□□□□ 0.28
SCAP-210ENST00000468965 ANKRD36CQ5JPF3 1778 aa16.8■□□□□ 0.28
SCAP-210ENST00000468965 PSDA5PKW4 1024 aaPredicted RBP16.8■□□□□ 0.28
SCAP-210ENST00000468965 TRAPPC3LQ5T215 181 aa16.8■□□□□ 0.28
SCAP-210ENST00000468965 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
SCAP-210ENST00000468965 COL24A1Q17RW2 1714 aa16.79■□□□□ 0.28
SCAP-210ENST00000468965 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
SCAP-210ENST00000468965 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
SCAP-210ENST00000468965 DZIP3Q86Y13 1208 aaKnown RBP16.79■□□□□ 0.28
SCAP-210ENST00000468965 FLAD1Q8NFF5 587 aa16.79■□□□□ 0.28
SCAP-210ENST00000468965 SMC4Q9NTJ3 1288 aa16.79■□□□□ 0.28
SCAP-210ENST00000468965 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
SCAP-210ENST00000468965 USP42Q9H9J4 1324 aaKnown RBP16.78■□□□□ 0.28
SCAP-210ENST00000468965 A0A087WZG4 1122 aa16.78■□□□□ 0.28
SCAP-210ENST00000468965 BCAR3O75815 825 aa16.78■□□□□ 0.28
SCAP-210ENST00000468965 CAMTA2O94983 1202 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms