RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 CD2APQ9Y5K6 639 aa19.45■□□□□ 0.7
PCOLCE-204ENST00000468214 BTBD11A6QL63 1104 aa19.44■□□□□ 0.7
PCOLCE-204ENST00000468214 CYP19A1P11511 503 aaPredicted RBP19.44■□□□□ 0.7
PCOLCE-204ENST00000468214 ZNF496Q96IT1 587 aaPredicted RBP19.44■□□□□ 0.7
PCOLCE-204ENST00000468214 RRP7AQ9Y3A4 280 aaKnown RBP19.44■□□□□ 0.7
PCOLCE-204ENST00000468214 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
PCOLCE-204ENST00000468214 HTATSF1O43719 755 aaKnown RBP19.43■□□□□ 0.7
PCOLCE-204ENST00000468214 STARD3NLO95772 234 aa19.43■□□□□ 0.7
PCOLCE-204ENST00000468214 GYS1P13807 737 aa19.43■□□□□ 0.7
PCOLCE-204ENST00000468214 RIPK4P57078 832 aa19.43■□□□□ 0.7
PCOLCE-204ENST00000468214 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
PCOLCE-204ENST00000468214 APAF1O14727 1248 aa19.42■□□□□ 0.7
PCOLCE-204ENST00000468214 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
PCOLCE-204ENST00000468214 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
PCOLCE-204ENST00000468214 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
PCOLCE-204ENST00000468214 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
PCOLCE-204ENST00000468214 ZPR1O75312 459 aa19.41■□□□□ 0.7
PCOLCE-204ENST00000468214 LMOD3Q0VAK6 560 aa19.41■□□□□ 0.7
PCOLCE-204ENST00000468214 TEX13AQ9BXU3 409 aaPredicted RBP19.41■□□□□ 0.7
PCOLCE-204ENST00000468214 ZBTB1Q9Y2K1 713 aa19.41■□□□□ 0.7
PCOLCE-204ENST00000468214 SOS1Q07889 1333 aaPredicted RBP19.41■□□□□ 0.7
PCOLCE-204ENST00000468214 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
PCOLCE-204ENST00000468214 CANXP27824 592 aaKnown RBP19.4■□□□□ 0.7
PCOLCE-204ENST00000468214 PARP3Q9Y6F1 533 aa19.4■□□□□ 0.7
PCOLCE-204ENST00000468214 KCNQ3O43525 872 aa19.39■□□□□ 0.69
PCOLCE-204ENST00000468214 COL15A1P39059 1388 aa19.39■□□□□ 0.69
PCOLCE-204ENST00000468214 UTRNP46939 3433 aa19.37■□□□□ 0.69
PCOLCE-204ENST00000468214 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
PCOLCE-204ENST00000468214 FKBP8Q14318 412 aa19.37■□□□□ 0.69
PCOLCE-204ENST00000468214 THUMPD2Q9BTF0 503 aaKnown RBP19.37■□□□□ 0.69
PCOLCE-204ENST00000468214 ZNF330Q9Y3S2 320 aaPredicted RBP19.37■□□□□ 0.69
PCOLCE-204ENST00000468214 CHD4Q14839 1912 aa19.37■□□□□ 0.69
PCOLCE-204ENST00000468214 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
PCOLCE-204ENST00000468214 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
PCOLCE-204ENST00000468214 NPM2Q86SE8 214 aaKnown RBP19.36■□□□□ 0.69
PCOLCE-204ENST00000468214 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
PCOLCE-204ENST00000468214 GRIN3BO60391 1043 aa19.35■□□□□ 0.69
PCOLCE-204ENST00000468214 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.69
PCOLCE-204ENST00000468214 NARFQ9UHQ1 456 aa19.35■□□□□ 0.69
PCOLCE-204ENST00000468214 TRIM35Q9UPQ4 493 aa19.35■□□□□ 0.69
PCOLCE-204ENST00000468214 A0A087WZG4 1122 aa19.34■□□□□ 0.69
PCOLCE-204ENST00000468214 SNRPA1P09661 255 aaKnown RBP19.34■□□□□ 0.69
PCOLCE-204ENST00000468214 WWC3Q9ULE0 1092 aa19.34■□□□□ 0.69
PCOLCE-204ENST00000468214 A1BGP04217 495 aa19.33■□□□□ 0.68
PCOLCE-204ENST00000468214 C10orf71Q711Q0 1435 aa19.33■□□□□ 0.68
PCOLCE-204ENST00000468214 EIF5P55010 431 aaKnown RBP19.32■□□□□ 0.68
PCOLCE-204ENST00000468214 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
PCOLCE-204ENST00000468214 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
PCOLCE-204ENST00000468214 KIF13BQ9NQT8 1826 aa19.31■□□□□ 0.68
PCOLCE-204ENST00000468214 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
PCOLCE-204ENST00000468214 DDR1Q08345 913 aa19.31■□□□□ 0.68
PCOLCE-204ENST00000468214 USP16Q9Y5T5 823 aa19.31■□□□□ 0.68
PCOLCE-204ENST00000468214 TGFB2P61812 414 aa19.3■□□□□ 0.68
PCOLCE-204ENST00000468214 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
PCOLCE-204ENST00000468214 PRAMEF22A3QJZ6 481 aa19.29■□□□□ 0.68
PCOLCE-204ENST00000468214 POLRMTO00411 1230 aaKnown RBP19.29■□□□□ 0.68
PCOLCE-204ENST00000468214 TM4SF1P30408 202 aa19.29■□□□□ 0.68
PCOLCE-204ENST00000468214 CCDC27Q2M243 656 aa19.29■□□□□ 0.68
PCOLCE-204ENST00000468214 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
PCOLCE-204ENST00000468214 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
PCOLCE-204ENST00000468214 NFIXQ14938 502 aa19.28■□□□□ 0.68
PCOLCE-204ENST00000468214 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
PCOLCE-204ENST00000468214 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
PCOLCE-204ENST00000468214 TBC1D2BQ9UPU7 963 aa19.28■□□□□ 0.68
PCOLCE-204ENST00000468214 N4BP2Q86UW6 1770 aaPredicted RBP19.28■□□□□ 0.68
PCOLCE-204ENST00000468214 PIP4K2AP48426 406 aaPredicted RBP19.27■□□□□ 0.68
PCOLCE-204ENST00000468214 CALD1Q05682 793 aaKnown RBP19.27■□□□□ 0.68
PCOLCE-204ENST00000468214 BICDL1Q6ZP65 573 aa19.27■□□□□ 0.68
PCOLCE-204ENST00000468214 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
PCOLCE-204ENST00000468214 DPEP1P16444 411 aa19.26■□□□□ 0.67
PCOLCE-204ENST00000468214 WWC1Q8IX03 1113 aa19.26■□□□□ 0.67
PCOLCE-204ENST00000468214 TSPYL4Q9UJ04 414 aa19.26■□□□□ 0.67
PCOLCE-204ENST00000468214 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
PCOLCE-204ENST00000468214 SCN7AQ01118 1682 aa19.25■□□□□ 0.67
PCOLCE-204ENST00000468214 DZIP3Q86Y13 1208 aaKnown RBP19.25■□□□□ 0.67
PCOLCE-204ENST00000468214 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
PCOLCE-204ENST00000468214 ZNF784Q8NCA9 323 aaPredicted RBP19.24■□□□□ 0.67
PCOLCE-204ENST00000468214 BABAM1Q9NWV8 329 aa19.24■□□□□ 0.67
PCOLCE-204ENST00000468214 KIAA1551Q9HCM1 1747 aa19.24■□□□□ 0.67
PCOLCE-204ENST00000468214 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
PCOLCE-204ENST00000468214 SERPINB2P05120 415 aa19.23■□□□□ 0.67
PCOLCE-204ENST00000468214 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
PCOLCE-204ENST00000468214 TBC1D9BQ66K14 1250 aa19.23■□□□□ 0.67
PCOLCE-204ENST00000468214 GIGYF1O75420 1035 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-204ENST00000468214 CAMTA2O94983 1202 aa19.22■□□□□ 0.67
PCOLCE-204ENST00000468214 GNAI1P63096 354 aa19.22■□□□□ 0.67
PCOLCE-204ENST00000468214 CFAP44Q96MT7 982 aa19.22■□□□□ 0.67
PCOLCE-204ENST00000468214 IFT57Q9NWB7 429 aa19.22■□□□□ 0.67
PCOLCE-204ENST00000468214 CACNA1FO60840 1977 aa19.21■□□□□ 0.67
PCOLCE-204ENST00000468214 CHL1O00533 1208 aa19.21■□□□□ 0.67
PCOLCE-204ENST00000468214 NPHP1O15259 732 aa19.21■□□□□ 0.67
PCOLCE-204ENST00000468214 PIM2Q9P1W9 311 aa19.21■□□□□ 0.67
PCOLCE-204ENST00000468214 ZNF652Q9Y2D9 606 aa19.21■□□□□ 0.67
PCOLCE-204ENST00000468214 CARMIL3Q8ND23 1372 aa19.2■□□□□ 0.66
PCOLCE-204ENST00000468214 NBPF26B4DH59 902 aa19.2■□□□□ 0.66
PCOLCE-204ENST00000468214 CHRNA5P30532 468 aa19.2■□□□□ 0.66
PCOLCE-204ENST00000468214 NBPF10Q6P3W6 841 aaKnown RBP19.2■□□□□ 0.66
PCOLCE-204ENST00000468214 WDR63Q8IWG1 891 aa19.2■□□□□ 0.66
PCOLCE-204ENST00000468214 NBPF15Q8N660 670 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms