RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 XAGE2Q96GT9 111 aa8.95□□□□□ -0.98
NCK1-203ENST00000467911 NEURL1BA8MQ27 555 aa8.94□□□□□ -0.98
NCK1-203ENST00000467911 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
NCK1-203ENST00000467911 RNF135Q8IUD6 432 aa8.94□□□□□ -0.98
NCK1-203ENST00000467911 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
NCK1-203ENST00000467911 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
NCK1-203ENST00000467911 NR1H3Q13133 447 aa8.93□□□□□ -0.98
NCK1-203ENST00000467911 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
NCK1-203ENST00000467911 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
NCK1-203ENST00000467911 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
NCK1-203ENST00000467911 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
NCK1-203ENST00000467911 CCDC85AQ96PX6 553 aaPredicted RBP8.93□□□□□ -0.98
NCK1-203ENST00000467911 KLF15Q9UIH9 416 aa8.93□□□□□ -0.98
NCK1-203ENST00000467911 ZMYM1Q5SVZ6 1142 aa8.92□□□□□ -0.98
NCK1-203ENST00000467911 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
NCK1-203ENST00000467911 ALG2Q9H553 416 aa8.92□□□□□ -0.98
NCK1-203ENST00000467911 DNAAF2Q9NVR5 837 aaKnown RBP8.92□□□□□ -0.98
NCK1-203ENST00000467911 SERPINA10Q9UK55 444 aa8.92□□□□□ -0.98
NCK1-203ENST00000467911 EFHC2Q5JST6 749 aa8.91□□□□□ -0.98
NCK1-203ENST00000467911 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
NCK1-203ENST00000467911 CHSY3Q70JA7 882 aa8.91□□□□□ -0.98
NCK1-203ENST00000467911 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
NCK1-203ENST00000467911 ARAFP10398 606 aa8.9□□□□□ -0.98
NCK1-203ENST00000467911 WASHC4Q2M389 1173 aa8.9□□□□□ -0.98
NCK1-203ENST00000467911 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
NCK1-203ENST00000467911 CALR3Q96L12 384 aaKnown RBP8.9□□□□□ -0.98
NCK1-203ENST00000467911 CRISPLD1Q9H336 500 aa8.9□□□□□ -0.98
NCK1-203ENST00000467911 TSGA10IPQ3SY00 556 aa8.89□□□□□ -0.99
NCK1-203ENST00000467911 TRIM11Q96F44 468 aa8.89□□□□□ -0.99
NCK1-203ENST00000467911 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
NCK1-203ENST00000467911 WWC1Q8IX03 1113 aa8.88□□□□□ -0.99
NCK1-203ENST00000467911 UCN2Q96RP3 112 aa8.88□□□□□ -0.99
NCK1-203ENST00000467911 ZCCHC2Q9C0B9 1178 aaKnown RBP8.88□□□□□ -0.99
NCK1-203ENST00000467911 ETNK1Q9HBU6 452 aa8.88□□□□□ -0.99
NCK1-203ENST00000467911 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
NCK1-203ENST00000467911 PIK3R2O00459 728 aa8.87□□□□□ -0.99
NCK1-203ENST00000467911 FCHSD1Q86WN1 690 aa8.87□□□□□ -0.99
NCK1-203ENST00000467911 RSPO4Q2I0M5 234 aaPredicted RBP8.86□□□□□ -0.99
NCK1-203ENST00000467911 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
NCK1-203ENST00000467911 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
NCK1-203ENST00000467911 RHBDD1Q8TEB9 315 aa8.86□□□□□ -0.99
NCK1-203ENST00000467911 KRTAP4-12Q9BQ66 201 aa8.86□□□□□ -0.99
NCK1-203ENST00000467911 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
NCK1-203ENST00000467911 ATP4AP20648 1035 aa8.85□□□□□ -0.99
NCK1-203ENST00000467911 GATA4P43694 442 aa8.85□□□□□ -0.99
NCK1-203ENST00000467911 PLA2G4AP47712 749 aa8.85□□□□□ -0.99
NCK1-203ENST00000467911 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
NCK1-203ENST00000467911 CEP126Q9P2H0 1117 aa8.85□□□□□ -0.99
NCK1-203ENST00000467911 PCDHGC4Q9Y5F7 938 aa8.85□□□□□ -0.99
NCK1-203ENST00000467911 DCDC2BA2VCK2 349 aa8.84□□□□□ -0.99
NCK1-203ENST00000467911 CD33P20138 364 aa8.84□□□□□ -0.99
NCK1-203ENST00000467911 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
NCK1-203ENST00000467911 PLVAPQ9BX97 442 aa8.84□□□□□ -0.99
NCK1-203ENST00000467911 TLR1Q15399 786 aa8.83□□□□□ -1
NCK1-203ENST00000467911 NKAPLQ5M9Q1 402 aa8.83□□□□□ -1
NCK1-203ENST00000467911 LCE3BQ5TA77 95 aa8.83□□□□□ -1
NCK1-203ENST00000467911 MAPTP10636 758 aaKnown RBP8.82□□□□□ -1
NCK1-203ENST00000467911 ADH6P28332 368 aa8.82□□□□□ -1
NCK1-203ENST00000467911 TNP2Q05952 138 aa8.82□□□□□ -1
NCK1-203ENST00000467911 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
NCK1-203ENST00000467911 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
NCK1-203ENST00000467911 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
NCK1-203ENST00000467911 PCBP4P57723 403 aaKnown RBP8.81□□□□□ -1
NCK1-203ENST00000467911 FIGNL1Q6PIW4 674 aa8.81□□□□□ -1
NCK1-203ENST00000467911 TBC1D9Q6ZT07 1266 aa8.81□□□□□ -1
NCK1-203ENST00000467911 TPSG1Q9NRR2 321 aa8.81□□□□□ -1
NCK1-203ENST00000467911 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
NCK1-203ENST00000467911 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
NCK1-203ENST00000467911 PIK3CDO00329 1044 aa8.79□□□□□ -1
NCK1-203ENST00000467911 SPATA31C1P0DKV0 1188 aa8.79□□□□□ -1
NCK1-203ENST00000467911 SOX11P35716 441 aa8.79□□□□□ -1
NCK1-203ENST00000467911 NLRP8Q86W28 1048 aa8.79□□□□□ -1
NCK1-203ENST00000467911 ZNF592Q92610 1267 aa8.79□□□□□ -1
NCK1-203ENST00000467911 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
NCK1-203ENST00000467911 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.78□□□□□ -1
NCK1-203ENST00000467911 KHNYNO15037 678 aaKnown RBP8.78□□□□□ -1
NCK1-203ENST00000467911 SCNN1DP51172 638 aa8.78□□□□□ -1
NCK1-203ENST00000467911 FAM182BQ5T319 152 aa8.78□□□□□ -1
NCK1-203ENST00000467911 PHTF2Q8N3S3 785 aa8.78□□□□□ -1
NCK1-203ENST00000467911 AIDAQ96BJ3 306 aa8.78□□□□□ -1
NCK1-203ENST00000467911 STRN4Q9NRL3 753 aa8.78□□□□□ -1
NCK1-203ENST00000467911 A0A1W2PNR3 127 aa8.77□□□□□ -1.01
NCK1-203ENST00000467911 DYRK3O43781 588 aa8.77□□□□□ -1.01
NCK1-203ENST00000467911 RFX1P22670 979 aa8.77□□□□□ -1.01
NCK1-203ENST00000467911 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
NCK1-203ENST00000467911 ZNF295-AS1Q8N0V1 137 aa8.77□□□□□ -1.01
NCK1-203ENST00000467911 FAM229AH3BQW9 127 aa8.76□□□□□ -1.01
NCK1-203ENST00000467911 EIF4G2P78344 907 aaKnown RBP eCLIP8.76□□□□□ -1.01
NCK1-203ENST00000467911 ZNF468Q5VIY5 522 aaPredicted RBP8.76□□□□□ -1.01
NCK1-203ENST00000467911 RETREG2Q8NC44 543 aa8.76□□□□□ -1.01
NCK1-203ENST00000467911 AVENQ9NQS1 362 aaPredicted RBP8.76□□□□□ -1.01
NCK1-203ENST00000467911 DOLKQ9UPQ8 538 aa8.75□□□□□ -1.01
NCK1-203ENST00000467911 MAFBQ9Y5Q3 323 aaPredicted RBP8.75□□□□□ -1.01
NCK1-203ENST00000467911 USP3Q9Y6I4 520 aa8.75□□□□□ -1.01
NCK1-203ENST00000467911 INHAP05111 366 aa8.74□□□□□ -1.01
NCK1-203ENST00000467911 LMOD1P29536 600 aaPredicted RBP8.74□□□□□ -1.01
NCK1-203ENST00000467911 TRIM26Q12899 539 aaPredicted RBP8.74□□□□□ -1.01
NCK1-203ENST00000467911 USP4Q13107 963 aa8.74□□□□□ -1.01
NCK1-203ENST00000467911 COL9A3Q14050 684 aaPredicted RBP8.74□□□□□ -1.01
NCK1-203ENST00000467911 ARSJQ5FYB0 599 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms