RNA–Protein interactions for RNA: ENST00000467673.5

MACF1-211, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-211ENST00000467673 USP42Q9H9J4 1324 aaKnown RBP28.45■■■□□ 2.15
MACF1-211ENST00000467673 KLHL34Q8N239 644 aa28.45■■■□□ 2.14
MACF1-211ENST00000467673 THUMPD2Q9BTF0 503 aaKnown RBP28.45■■■□□ 2.14
MACF1-211ENST00000467673 CD2APQ9Y5K6 639 aa28.45■■■□□ 2.14
MACF1-211ENST00000467673 MMP10P09238 476 aa28.44■■■□□ 2.14
MACF1-211ENST00000467673 TMPOP42166 694 aaKnown RBP28.44■■■□□ 2.14
MACF1-211ENST00000467673 MIS18AQ9NYP9 233 aa28.44■■■□□ 2.14
MACF1-211ENST00000467673 EIF5P55010 431 aaKnown RBP28.42■■■□□ 2.14
MACF1-211ENST00000467673 RIPK4P57078 832 aa28.42■■■□□ 2.14
MACF1-211ENST00000467673 WDR43Q15061 677 aaKnown RBP eCLIP28.42■■■□□ 2.14
MACF1-211ENST00000467673 CCDC146Q8IYE0 955 aa28.42■■■□□ 2.14
MACF1-211ENST00000467673 USP16Q9Y5T5 823 aa28.42■■■□□ 2.14
MACF1-211ENST00000467673 PRAMEF22A3QJZ6 481 aa28.41■■■□□ 2.14
MACF1-211ENST00000467673 FKBP8Q14318 412 aa28.41■■■□□ 2.14
MACF1-211ENST00000467673 COL15A1P39059 1388 aa28.4■■■□□ 2.14
MACF1-211ENST00000467673 CANXP27824 592 aaKnown RBP28.4■■■□□ 2.14
MACF1-211ENST00000467673 RUNDC1Q96C34 613 aa28.4■■■□□ 2.14
MACF1-211ENST00000467673 CCDC184Q52MB2 194 aa28.39■■■□□ 2.14
MACF1-211ENST00000467673 NARFQ9UHQ1 456 aa28.39■■■□□ 2.14
MACF1-211ENST00000467673 DCAF8L1A6NGE4 600 aa28.38■■■□□ 2.13
MACF1-211ENST00000467673 A1BGP04217 495 aa28.38■■■□□ 2.13
MACF1-211ENST00000467673 SNRPA1P09661 255 aaKnown RBP28.38■■■□□ 2.13
MACF1-211ENST00000467673 PNISRQ8TF01 805 aaKnown RBP28.38■■■□□ 2.13
MACF1-211ENST00000467673 KDM3BQ7LBC6 1761 aa28.37■■■□□ 2.13
MACF1-211ENST00000467673 TM4SF1P30408 202 aa28.37■■■□□ 2.13
MACF1-211ENST00000467673 USPL1Q5W0Q7 1092 aa28.37■■■□□ 2.13
MACF1-211ENST00000467673 BCL2L12Q9HB09 334 aa28.37■■■□□ 2.13
MACF1-211ENST00000467673 ZPR1O75312 459 aa28.36■■■□□ 2.13
MACF1-211ENST00000467673 RRP7AQ9Y3A4 280 aaKnown RBP28.36■■■□□ 2.13
MACF1-211ENST00000467673 IL6STP40189 918 aaPredicted RBP28.35■■■□□ 2.13
MACF1-211ENST00000467673 TRIM35Q9UPQ4 493 aa28.35■■■□□ 2.13
MACF1-211ENST00000467673 EIF4A1P60842 406 aaKnown RBP28.34■■■□□ 2.13
MACF1-211ENST00000467673 DDR1Q08345 913 aa28.34■■■□□ 2.13
MACF1-211ENST00000467673 KIF13BQ9NQT8 1826 aa28.33■■■□□ 2.13
MACF1-211ENST00000467673 LMOD3Q0VAK6 560 aa28.32■■■□□ 2.12
MACF1-211ENST00000467673 PARP3Q9Y6F1 533 aa28.32■■■□□ 2.12
MACF1-211ENST00000467673 A0A087WZG4 1122 aa28.31■■■□□ 2.12
MACF1-211ENST00000467673 GIGYF1O75420 1035 aaPredicted RBP28.31■■■□□ 2.12
MACF1-211ENST00000467673 NEUROD2Q15784 382 aa28.31■■■□□ 2.12
MACF1-211ENST00000467673 C10orf71Q711Q0 1435 aa28.3■■■□□ 2.12
MACF1-211ENST00000467673 NBPF26B4DH59 902 aa28.3■■■□□ 2.12
MACF1-211ENST00000467673 POLRMTO00411 1230 aaKnown RBP28.3■■■□□ 2.12
MACF1-211ENST00000467673 YBX3P16989 372 aaKnown RBP eCLIP28.3■■■□□ 2.12
MACF1-211ENST00000467673 GPR162Q16538 588 aa28.3■■■□□ 2.12
MACF1-211ENST00000467673 NBPF10Q6P3W6 841 aaKnown RBP28.3■■■□□ 2.12
MACF1-211ENST00000467673 NBPF15Q8N660 670 aa28.3■■■□□ 2.12
MACF1-211ENST00000467673 BABAM1Q9NWV8 329 aa28.3■■■□□ 2.12
MACF1-211ENST00000467673 PIP4K2AP48426 406 aaPredicted RBP28.28■■■□□ 2.12
MACF1-211ENST00000467673 NFIXQ14938 502 aa28.28■■■□□ 2.12
MACF1-211ENST00000467673 TBC1D2BQ9UPU7 963 aa28.28■■■□□ 2.12
MACF1-211ENST00000467673 KIAA1551Q9HCM1 1747 aa28.28■■■□□ 2.12
MACF1-211ENST00000467673 ANP32CO43423 234 aa28.27■■■□□ 2.12
MACF1-211ENST00000467673 TSPYL4Q9UJ04 414 aa28.26■■■□□ 2.11
MACF1-211ENST00000467673 CAMTA2O94983 1202 aa28.25■■■□□ 2.11
MACF1-211ENST00000467673 TGFB2P61812 414 aa28.25■■■□□ 2.11
MACF1-211ENST00000467673 ZNF330Q9Y3S2 320 aaPredicted RBP28.25■■■□□ 2.11
MACF1-211ENST00000467673 PXDNLA1KZ92 1463 aa28.25■■■□□ 2.11
MACF1-211ENST00000467673 CHL1O00533 1208 aa28.24■■■□□ 2.11
MACF1-211ENST00000467673 APAF1O14727 1248 aa28.24■■■□□ 2.11
MACF1-211ENST00000467673 LAMB4A4D0S4 1761 aa28.24■■■□□ 2.11
MACF1-211ENST00000467673 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
MACF1-211ENST00000467673 SCN7AQ01118 1682 aa28.23■■■□□ 2.11
MACF1-211ENST00000467673 NRXN2Q9P2S2 1712 aa28.22■■■□□ 2.11
MACF1-211ENST00000467673 AFDNP55196 1824 aaKnown RBP28.22■■■□□ 2.11
MACF1-211ENST00000467673 YY1P25490 414 aa28.21■■■□□ 2.11
MACF1-211ENST00000467673 TBC1D9BQ66K14 1250 aa28.21■■■□□ 2.11
MACF1-211ENST00000467673 DZIP3Q86Y13 1208 aaKnown RBP28.21■■■□□ 2.11
MACF1-211ENST00000467673 CHD4Q14839 1912 aa28.2■■■□□ 2.11
MACF1-211ENST00000467673 N4BP2Q86UW6 1770 aaPredicted RBP28.2■■■□□ 2.11
MACF1-211ENST00000467673 A0A0G2JLW4 131 aa28.2■■■□□ 2.1
MACF1-211ENST00000467673 KCNA3P22001 575 aa28.2■■■□□ 2.1
MACF1-211ENST00000467673 GRIN3BO60391 1043 aa28.19■■■□□ 2.1
MACF1-211ENST00000467673 SERPINB2P05120 415 aa28.19■■■□□ 2.1
MACF1-211ENST00000467673 DPEP1P16444 411 aa28.18■■■□□ 2.1
MACF1-211ENST00000467673 MRS2Q9HD23 443 aa28.18■■■□□ 2.1
MACF1-211ENST00000467673 BCORQ6W2J9 1755 aa28.18■■■□□ 2.1
MACF1-211ENST00000467673 NPM2Q86SE8 214 aaKnown RBP28.17■■■□□ 2.1
MACF1-211ENST00000467673 CLEC4GQ6UXB4 293 aa28.16■■■□□ 2.1
MACF1-211ENST00000467673 BICDL1Q6ZP65 573 aa28.16■■■□□ 2.1
MACF1-211ENST00000467673 WWC3Q9ULE0 1092 aa28.16■■■□□ 2.1
MACF1-211ENST00000467673 RGL2O15211 777 aa28.15■■■□□ 2.1
MACF1-211ENST00000467673 ZNF853P0CG23 659 aa28.15■■■□□ 2.1
MACF1-211ENST00000467673 CFAP44Q96MT7 982 aa28.15■■■□□ 2.1
MACF1-211ENST00000467673 PDIA6Q15084 440 aa28.14■■■□□ 2.1
MACF1-211ENST00000467673 LRP10Q7Z4F1 713 aa28.14■■■□□ 2.1
MACF1-211ENST00000467673 BRCA1P38398 1863 aaKnown RBP28.14■■■□□ 2.1
MACF1-211ENST00000467673 KRT24Q2M2I5 525 aa28.13■■■□□ 2.09
MACF1-211ENST00000467673 ERBB4Q15303 1308 aa28.13■■■□□ 2.09
MACF1-211ENST00000467673 LAS1LQ9Y4W2 734 aaKnown RBP28.12■■■□□ 2.09
MACF1-211ENST00000467673 CARMIL3Q8ND23 1372 aa28.11■■■□□ 2.09
MACF1-211ENST00000467673 CHRNA5P30532 468 aa28.1■■■□□ 2.09
MACF1-211ENST00000467673 HLFQ16534 295 aa28.1■■■□□ 2.09
MACF1-211ENST00000467673 SETDB2Q96T68 719 aa28.1■■■□□ 2.09
MACF1-211ENST00000467673 MYL6BP14649 208 aa28.09■■■□□ 2.09
MACF1-211ENST00000467673 PRR5LQ6MZQ0 368 aa28.09■■■□□ 2.09
MACF1-211ENST00000467673 TTLL7Q6ZT98 887 aa28.09■■■□□ 2.09
MACF1-211ENST00000467673 MBIPQ9NS73 344 aa28.09■■■□□ 2.09
MACF1-211ENST00000467673 EIF2S2P20042 333 aaKnown RBP28.08■■■□□ 2.09
MACF1-211ENST00000467673 NGEFQ8N5V2 710 aa28.08■■■□□ 2.09
MACF1-211ENST00000467673 IFT57Q9NWB7 429 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms