RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 C1orf141Q5JVX7 400 aa8.82□□□□□ -1
UBXN4-205ENST00000467065 ATG3Q9NT62 314 aa8.82□□□□□ -1
UBXN4-205ENST00000467065 MAP3K5Q99683 1374 aa8.82□□□□□ -1
UBXN4-205ENST00000467065 MRC1P22897 1456 aa8.82□□□□□ -1
UBXN4-205ENST00000467065 KIF13BQ9NQT8 1826 aa8.82□□□□□ -1
UBXN4-205ENST00000467065 N4BP2Q86UW6 1770 aaPredicted RBP8.81□□□□□ -1
UBXN4-205ENST00000467065 ERVV-2B6SEH9 535 aa8.81□□□□□ -1
UBXN4-205ENST00000467065 DIAPH1O60610 1272 aaKnown RBP8.81□□□□□ -1
UBXN4-205ENST00000467065 HSP90AB1P08238 724 aaKnown RBP8.81□□□□□ -1
UBXN4-205ENST00000467065 ATP6V1AP38606 617 aa8.81□□□□□ -1
UBXN4-205ENST00000467065 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
UBXN4-205ENST00000467065 DCAF5Q96JK2 942 aa8.81□□□□□ -1
UBXN4-205ENST00000467065 NUDCQ9Y266 331 aa8.81□□□□□ -1
UBXN4-205ENST00000467065 KIAA1551Q9HCM1 1747 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 GNPATO15228 680 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 YY1P25490 414 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 CABP4P57796 275 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 MAMSTRQ6ZN01 415 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 NLGN2Q8NFZ4 835 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
UBXN4-205ENST00000467065 PNNQ9H307 717 aaKnown RBP8.8□□□□□ -1
UBXN4-205ENST00000467065 BRCA1P38398 1863 aaKnown RBP8.79□□□□□ -1
UBXN4-205ENST00000467065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
UBXN4-205ENST00000467065 KCPQ6ZWJ8 1503 aa8.79□□□□□ -1
UBXN4-205ENST00000467065 U2SURPO15042 1029 aaKnown RBP8.78□□□□□ -1
UBXN4-205ENST00000467065 HMGB2P26583 209 aaKnown RBP8.78□□□□□ -1
UBXN4-205ENST00000467065 SSFA2P28290 1259 aa8.78□□□□□ -1
UBXN4-205ENST00000467065 ATN1P54259 1190 aaPredicted RBP8.78□□□□□ -1
UBXN4-205ENST00000467065 AKAP4Q5JQC9 854 aa8.78□□□□□ -1
UBXN4-205ENST00000467065 NFATC2IPQ8NCF5 419 aa8.78□□□□□ -1
UBXN4-205ENST00000467065 FLAD1Q8NFF5 587 aa8.78□□□□□ -1
UBXN4-205ENST00000467065 AFDNP55196 1824 aaKnown RBP8.77□□□□□ -1
UBXN4-205ENST00000467065 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
UBXN4-205ENST00000467065 WDR43Q15061 677 aaKnown RBP eCLIP8.77□□□□□ -1.01
UBXN4-205ENST00000467065 MTHFSDQ2M296 383 aaKnown RBP8.77□□□□□ -1.01
UBXN4-205ENST00000467065 TSPYL2Q9H2G4 693 aaPredicted RBP8.77□□□□□ -1.01
UBXN4-205ENST00000467065 LGR6Q9HBX8 967 aa8.77□□□□□ -1.01
UBXN4-205ENST00000467065 RNMTO43148 476 aaKnown RBP8.76□□□□□ -1.01
UBXN4-205ENST00000467065 GPR162Q16538 588 aa8.76□□□□□ -1.01
UBXN4-205ENST00000467065 KIF12Q96FN5 646 aa8.76□□□□□ -1.01
UBXN4-205ENST00000467065 SLC52A2Q9HAB3 445 aa8.76□□□□□ -1.01
UBXN4-205ENST00000467065 CNTNAP4Q9C0A0 1308 aa8.76□□□□□ -1.01
UBXN4-205ENST00000467065 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
UBXN4-205ENST00000467065 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
UBXN4-205ENST00000467065 SLC39A6Q13433 755 aa8.75□□□□□ -1.01
UBXN4-205ENST00000467065 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
UBXN4-205ENST00000467065 MYBBP1AQ9BQG0 1328 aaKnown RBP8.75□□□□□ -1.01
UBXN4-205ENST00000467065 SCN7AQ01118 1682 aa8.75□□□□□ -1.01
UBXN4-205ENST00000467065 LAMB4A4D0S4 1761 aa8.74□□□□□ -1.01
UBXN4-205ENST00000467065 PRKAR2BP31323 418 aa8.74□□□□□ -1.01
UBXN4-205ENST00000467065 CRKLP46109 303 aaKnown RBP8.74□□□□□ -1.01
UBXN4-205ENST00000467065 PRKRIP1Q9H875 184 aaPredicted RBP8.74□□□□□ -1.01
UBXN4-205ENST00000467065 MRS2Q9HD23 443 aa8.74□□□□□ -1.01
UBXN4-205ENST00000467065 ARFGEF1Q9Y6D6 1849 aa8.74□□□□□ -1.01
UBXN4-205ENST00000467065 CACNA1SQ13698 1873 aa8.74□□□□□ -1.01
UBXN4-205ENST00000467065 BCORQ6W2J9 1755 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 KDM3BQ7LBC6 1761 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 DLEC1Q9Y238 1755 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 RPS6KA4O75676 772 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 MMP10P09238 476 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBXN4-205ENST00000467065 TRAPPC3LQ5T215 181 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
UBXN4-205ENST00000467065 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
UBXN4-205ENST00000467065 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 BMP2KQ9NSY1 1161 aaPredicted RBP8.73□□□□□ -1.01
UBXN4-205ENST00000467065 WWC3Q9ULE0 1092 aa8.73□□□□□ -1.01
UBXN4-205ENST00000467065 PXDNLA1KZ92 1463 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 NRXN2Q9P2S2 1712 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 GNAT3A8MTJ3 354 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 RFC4P35249 363 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 PHACTR3Q96KR7 559 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 SCUBE2Q9NQ36 999 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 CD2APQ9Y5K6 639 aa8.72□□□□□ -1.01
UBXN4-205ENST00000467065 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.01
UBXN4-205ENST00000467065 CCDC88AQ3V6T2 1871 aa8.71□□□□□ -1.01
UBXN4-205ENST00000467065 ANKRD31Q8N7Z5 1873 aa8.71□□□□□ -1.01
UBXN4-205ENST00000467065 U2AF1L5P0DN76 240 aaPredicted RBP8.71□□□□□ -1.02
UBXN4-205ENST00000467065 GYS1P13807 737 aa8.71□□□□□ -1.02
UBXN4-205ENST00000467065 U2AF1Q01081 240 aaKnown RBP eCLIP8.71□□□□□ -1.02
UBXN4-205ENST00000467065 INTS5Q6P9B9 1019 aaKnown RBP8.71□□□□□ -1.02
UBXN4-205ENST00000467065 IL17REQ8NFR9 667 aa8.71□□□□□ -1.02
UBXN4-205ENST00000467065 CCDC87Q9NVE4 849 aa8.71□□□□□ -1.02
UBXN4-205ENST00000467065 SRP68Q9UHB9 627 aaKnown RBP8.71□□□□□ -1.02
UBXN4-205ENST00000467065 TRPC6Q9Y210 931 aa8.71□□□□□ -1.02
UBXN4-205ENST00000467065 COL15A1P39059 1388 aa8.71□□□□□ -1.02
UBXN4-205ENST00000467065 CCER2I3L3R5 266 aa8.7□□□□□ -1.02
UBXN4-205ENST00000467065 CYP19A1P11511 503 aaPredicted RBP8.7□□□□□ -1.02
UBXN4-205ENST00000467065 TEFQ10587 303 aa8.7□□□□□ -1.02
UBXN4-205ENST00000467065 TTC5Q8N0Z6 440 aa8.7□□□□□ -1.02
UBXN4-205ENST00000467065 ZNF784Q8NCA9 323 aaPredicted RBP8.7□□□□□ -1.02
UBXN4-205ENST00000467065 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
UBXN4-205ENST00000467065 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
UBXN4-205ENST00000467065 COL11A2P13942 1736 aaPredicted RBP8.7□□□□□ -1.02
UBXN4-205ENST00000467065 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
UBXN4-205ENST00000467065 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
UBXN4-205ENST00000467065 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
UBXN4-205ENST00000467065 SBF1O95248 1867 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms