RNA–Protein interactions for RNA: ENST00000466987.1

PSMD2-211, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-211	ENST00000466987	LRRC4B	Q9NT99	713 aa		13.65	□□□□□ -0.22
PSMD2-211	ENST00000466987	C4B	P0C0L5	1744 aa		13.64	□□□□□ -0.23
PSMD2-211	ENST00000466987	TSPYL6	Q8N831	410 aa		13.64	□□□□□ -0.23
PSMD2-211	ENST00000466987	LINC00116	Q8NCU8	138 aa		13.64	□□□□□ -0.23
PSMD2-211	ENST00000466987	HOXB7	P09629	217 aa		13.63	□□□□□ -0.23
PSMD2-211	ENST00000466987	TWISTNB	Q3B726	338 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD2-211	ENST00000466987	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD2-211	ENST00000466987	USP16	Q9Y5T5	823 aa		13.63	□□□□□ -0.23
PSMD2-211	ENST00000466987	STARD3NL	O95772	234 aa		13.62	□□□□□ -0.23
PSMD2-211	ENST00000466987	EIF2S2	P20042	333 aa	Known RBP	13.62	□□□□□ -0.23
PSMD2-211	ENST00000466987	HDGFL1	Q5TGJ6	251 aa		13.62	□□□□□ -0.23
PSMD2-211	ENST00000466987	NECTIN2	Q92692	538 aa		13.62	□□□□□ -0.23
PSMD2-211	ENST00000466987	SOS1	Q07889	1333 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD2-211	ENST00000466987	CYP19A1	P11511	503 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD2-211	ENST00000466987	CNTNAP4	Q9C0A0	1308 aa		13.61	□□□□□ -0.23
PSMD2-211	ENST00000466987	HMGB2	P26583	209 aa	Known RBP	13.6	□□□□□ -0.23
PSMD2-211	ENST00000466987	CRKL	P46109	303 aa	Known RBP	13.6	□□□□□ -0.23
PSMD2-211	ENST00000466987	AK7	Q96M32	723 aa		13.6	□□□□□ -0.23
PSMD2-211	ENST00000466987	CCDC87	Q9NVE4	849 aa		13.6	□□□□□ -0.23
PSMD2-211	ENST00000466987	ZBTB1	Q9Y2K1	713 aa		13.6	□□□□□ -0.23
PSMD2-211	ENST00000466987	MYH14	Q7Z406	1995 aa	Known RBP	13.6	□□□□□ -0.23
PSMD2-211	ENST00000466987	VAMP4	O75379	141 aa		13.59	□□□□□ -0.23
PSMD2-211	ENST00000466987	A1BG	P04217	495 aa		13.59	□□□□□ -0.23
PSMD2-211	ENST00000466987	CANX	P27824	592 aa	Known RBP	13.59	□□□□□ -0.23
PSMD2-211	ENST00000466987	PIP4K2A	P48426	406 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD2-211	ENST00000466987	ZNF827	Q17R98	1081 aa		13.59	□□□□□ -0.23
PSMD2-211	ENST00000466987	TUBGCP6	Q96RT7	1819 aa		13.59	□□□□□ -0.23
PSMD2-211	ENST00000466987	TCERG1	O14776	1098 aa	Known RBP	13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	GNPAT	O15228	680 aa		13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	CCDC30	Q5VVM6	783 aa		13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	INTS5	Q6P9B9	1019 aa	Known RBP	13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	STK32B	Q9NY57	414 aa		13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	CHPF2	Q9P2E5	772 aa		13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	UBR3	Q6ZT12	1888 aa		13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	ERBB4	Q15303	1308 aa		13.58	□□□□□ -0.24
PSMD2-211	ENST00000466987	ANXA1	P04083	346 aa		13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	CT47B1	P0C2W7	299 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	MYL6B	P14649	208 aa		13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	RC3H1	Q5TC82	1133 aa	Known RBP	13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	AKT1S1	Q96B36	256 aa		13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	STK31	Q9BXU1	1019 aa		13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	CHMP4A	Q9BY43	222 aa		13.57	□□□□□ -0.24
PSMD2-211	ENST00000466987	NBPF26	B4DH59	902 aa		13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	PROSER3	Q2NL68	480 aa		13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	NBPF14	Q5TI25	921 aa		13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	NBPF10	Q6P3W6	841 aa	Known RBP	13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	NBPF15	Q8N660	670 aa		13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	TFCP2L1	Q9NZI6	479 aa		13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	DBF4	Q9UBU7	674 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	RTCB	Q9Y3I0	505 aa	Known RBP	13.56	□□□□□ -0.24
PSMD2-211	ENST00000466987	DCAF8L1	A6NGE4	600 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	RPS6KA4	O75676	772 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	PHF14	O94880	888 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	IL6ST	P40189	918 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	SLC15A2	Q16348	729 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	NPM2	Q86SE8	214 aa	Known RBP	13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	ZNF428	Q96B54	188 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	C4A	P0C0L4	1744 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	QSER1	Q2KHR3	1735 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	COL15A1	P39059	1388 aa		13.55	□□□□□ -0.24
PSMD2-211	ENST00000466987	PDIA6	Q15084	440 aa		13.54	□□□□□ -0.24
PSMD2-211	ENST00000466987	SMIM5	Q71RC9	77 aa		13.54	□□□□□ -0.24
PSMD2-211	ENST00000466987	AMIGO3	Q86WK7	504 aa		13.54	□□□□□ -0.24
PSMD2-211	ENST00000466987	BCL2L13	Q9BXK5	485 aa		13.54	□□□□□ -0.24
PSMD2-211	ENST00000466987	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	SLC4A2	P04920	1241 aa		13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	SSFA2	P28290	1259 aa		13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	EIF5	P55010	431 aa	Known RBP	13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	SSH1	Q8WYL5	1049 aa		13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	SMC4	Q9NTJ3	1288 aa		13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	HYPK	Q9NX55	129 aa		13.53	□□□□□ -0.24
PSMD2-211	ENST00000466987	CACNA1F	O60840	1977 aa		13.52	□□□□□ -0.24
PSMD2-211	ENST00000466987	RARS	P54136	660 aa	Known RBP	13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	ALDH1L2	Q3SY69	923 aa		13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	TRAPPC3L	Q5T215	181 aa		13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	LRP10	Q7Z4F1	713 aa		13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	XAGE3	Q8WTP9	111 aa		13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	ARX	Q96QS3	562 aa		13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	PNPLA7	Q6ZV29	1317 aa		13.52	□□□□□ -0.25
PSMD2-211	ENST00000466987	BCOR	Q6W2J9	1755 aa		13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	SCN7A	Q01118	1682 aa		13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987		A0A087WZG4	1122 aa		13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	AIMP1	Q12904	312 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	KIF6	Q6ZMV9	814 aa		13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	G2E3	Q7L622	706 aa		13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	MRPL50	Q8N5N7	158 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	PHAX	Q9H814	394 aa	Known RBP	13.51	□□□□□ -0.25
PSMD2-211	ENST00000466987	HOXD11	P31277	338 aa	Predicted RBP	13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	RFC4	P35249	363 aa		13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	R3HDM1	Q15032	1099 aa	Known RBP	13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	TTLL7	Q6ZT98	887 aa		13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	COPS6	Q7L5N1	327 aa		13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	DZIP3	Q86Y13	1208 aa	Known RBP	13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	FLAD1	Q8NFF5	587 aa		13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	ARHGEF1	Q92888	912 aa	Known RBP	13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	RCAN3	Q9UKA8	241 aa		13.5	□□□□□ -0.25
PSMD2-211	ENST00000466987	TBC1D2B	Q9UPU7	963 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms