RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
PDCD11-202ENST00000466959 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
PDCD11-202ENST00000466959 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
PDCD11-202ENST00000466959 ZNF428Q96B54 188 aa17.08■□□□□ 0.32
PDCD11-202ENST00000466959 TEX13AQ9BXU3 409 aaPredicted RBP17.08■□□□□ 0.32
PDCD11-202ENST00000466959 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
PDCD11-202ENST00000466959 DNAJC10Q8IXB1 793 aa17.07■□□□□ 0.32
PDCD11-202ENST00000466959 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
PDCD11-202ENST00000466959 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
PDCD11-202ENST00000466959 HDGFL1Q5TGJ6 251 aa17.06■□□□□ 0.32
PDCD11-202ENST00000466959 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
PDCD11-202ENST00000466959 STK32BQ9NY57 414 aa17.06■□□□□ 0.32
PDCD11-202ENST00000466959 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
PDCD11-202ENST00000466959 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
PDCD11-202ENST00000466959 ITPK1Q13572 414 aa17.05■□□□□ 0.32
PDCD11-202ENST00000466959 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
PDCD11-202ENST00000466959 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
PDCD11-202ENST00000466959 STARD3NLO95772 234 aa17.04■□□□□ 0.32
PDCD11-202ENST00000466959 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
PDCD11-202ENST00000466959 CCDC30Q5VVM6 783 aa17.04■□□□□ 0.32
PDCD11-202ENST00000466959 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
PDCD11-202ENST00000466959 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
PDCD11-202ENST00000466959 MYH14Q7Z406 1995 aaKnown RBP17.03■□□□□ 0.32
PDCD11-202ENST00000466959 CYP19A1P11511 503 aaPredicted RBP17.03■□□□□ 0.32
PDCD11-202ENST00000466959 RARSP54136 660 aaKnown RBP17.03■□□□□ 0.32
PDCD11-202ENST00000466959 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
PDCD11-202ENST00000466959 ALDH1L2Q3SY69 923 aa17.03■□□□□ 0.32
PDCD11-202ENST00000466959 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
PDCD11-202ENST00000466959 NECTIN2Q92692 538 aa17.03■□□□□ 0.32
PDCD11-202ENST00000466959 RCAN3Q9UKA8 241 aa17.03■□□□□ 0.32
PDCD11-202ENST00000466959 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
PDCD11-202ENST00000466959 HMGB2P26583 209 aaKnown RBP17.02■□□□□ 0.32
PDCD11-202ENST00000466959 KCNQ4P56696 695 aa17.02■□□□□ 0.32
PDCD11-202ENST00000466959 PROM2Q8N271 834 aa17.02■□□□□ 0.32
PDCD11-202ENST00000466959 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
PDCD11-202ENST00000466959 FHDC1Q9C0D6 1143 aaPredicted RBP17.02■□□□□ 0.32
PDCD11-202ENST00000466959 LRRC4BQ9NT99 713 aa17.02■□□□□ 0.32
PDCD11-202ENST00000466959 PTGER2P43116 358 aa17.01■□□□□ 0.31
PDCD11-202ENST00000466959 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
PDCD11-202ENST00000466959 SYT17Q9BSW7 474 aa17.01■□□□□ 0.31
PDCD11-202ENST00000466959 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
PDCD11-202ENST00000466959 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
PDCD11-202ENST00000466959 A1BGP04217 495 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 CRKLP46109 303 aaKnown RBP17■□□□□ 0.31
PDCD11-202ENST00000466959 MTFR1LQ9H019 292 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
PDCD11-202ENST00000466959 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 CCDC87Q9NVE4 849 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
PDCD11-202ENST00000466959 CASZ1Q86V15 1759 aa17■□□□□ 0.31
PDCD11-202ENST00000466959 PDIA6Q15084 440 aa16.99■□□□□ 0.31
PDCD11-202ENST00000466959 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
PDCD11-202ENST00000466959 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
PDCD11-202ENST00000466959 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
PDCD11-202ENST00000466959 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
PDCD11-202ENST00000466959 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
PDCD11-202ENST00000466959 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
PDCD11-202ENST00000466959 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
PDCD11-202ENST00000466959 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
PDCD11-202ENST00000466959 PDGFDQ9GZP0 370 aaPredicted RBP16.98■□□□□ 0.31
PDCD11-202ENST00000466959 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
PDCD11-202ENST00000466959 BCAR3O75815 825 aa16.97■□□□□ 0.31
PDCD11-202ENST00000466959 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
PDCD11-202ENST00000466959 SLC15A2Q16348 729 aa16.97■□□□□ 0.31
PDCD11-202ENST00000466959 PROSER3Q2NL68 480 aa16.97■□□□□ 0.31
PDCD11-202ENST00000466959 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
PDCD11-202ENST00000466959 ZBTB1Q9Y2K1 713 aa16.97■□□□□ 0.31
PDCD11-202ENST00000466959 ANXA1P04083 346 aa16.96■□□□□ 0.31
PDCD11-202ENST00000466959 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
PDCD11-202ENST00000466959 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
PDCD11-202ENST00000466959 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
PDCD11-202ENST00000466959 KIF16BQ96L93 1317 aa16.96■□□□□ 0.3
PDCD11-202ENST00000466959 MYL6BP14649 208 aa16.95■□□□□ 0.3
PDCD11-202ENST00000466959 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
PDCD11-202ENST00000466959 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
PDCD11-202ENST00000466959 GPR162Q16538 588 aa16.95■□□□□ 0.3
PDCD11-202ENST00000466959 ARXQ96QS3 562 aa16.95■□□□□ 0.3
PDCD11-202ENST00000466959 QSER1Q2KHR3 1735 aa16.94■□□□□ 0.3
PDCD11-202ENST00000466959 AK7Q96M32 723 aa16.94■□□□□ 0.3
PDCD11-202ENST00000466959 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
PDCD11-202ENST00000466959 GNPATO15228 680 aa16.93■□□□□ 0.3
PDCD11-202ENST00000466959 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
PDCD11-202ENST00000466959 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
PDCD11-202ENST00000466959 FLIIQ13045 1269 aa16.93■□□□□ 0.3
PDCD11-202ENST00000466959 G2E3Q7L622 706 aa16.93■□□□□ 0.3
PDCD11-202ENST00000466959 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
PDCD11-202ENST00000466959 PTPRCP08575 1304 aa16.93■□□□□ 0.3
PDCD11-202ENST00000466959 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
PDCD11-202ENST00000466959 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
PDCD11-202ENST00000466959 COL15A1P39059 1388 aa16.92■□□□□ 0.3
PDCD11-202ENST00000466959 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
PDCD11-202ENST00000466959 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
PDCD11-202ENST00000466959 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
PDCD11-202ENST00000466959 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
PDCD11-202ENST00000466959 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.91■□□□□ 0.3
PDCD11-202ENST00000466959 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
PDCD11-202ENST00000466959 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
PDCD11-202ENST00000466959 SCN7AQ01118 1682 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms