RNA–Protein interactions for RNA: ENST00000466905.4

SSR2-203, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-203ENST00000466905 MIS18AQ9NYP9 233 aa11.82□□□□□ -0.52
SSR2-203ENST00000466905 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
SSR2-203ENST00000466905 PNPLA7Q6ZV29 1317 aa11.82□□□□□ -0.52
SSR2-203ENST00000466905 UTRNP46939 3433 aa11.82□□□□□ -0.52
SSR2-203ENST00000466905 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
SSR2-203ENST00000466905 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
SSR2-203ENST00000466905 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
SSR2-203ENST00000466905 ARXQ96QS3 562 aa11.81□□□□□ -0.52
SSR2-203ENST00000466905 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
SSR2-203ENST00000466905 SYT17Q9BSW7 474 aa11.81□□□□□ -0.52
SSR2-203ENST00000466905 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
SSR2-203ENST00000466905 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
SSR2-203ENST00000466905 LAS1LQ9Y4W2 734 aaKnown RBP11.81□□□□□ -0.52
SSR2-203ENST00000466905 COL5A3P25940 1745 aaPredicted RBP11.8□□□□□ -0.52
SSR2-203ENST00000466905 TJP1Q07157 1748 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
SSR2-203ENST00000466905 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 PHF14O94880 888 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
SSR2-203ENST00000466905 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
SSR2-203ENST00000466905 GNAI1P63096 354 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 SMIM5Q71RC9 77 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
SSR2-203ENST00000466905 IFT57Q9NWB7 429 aa11.8□□□□□ -0.52
SSR2-203ENST00000466905 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
SSR2-203ENST00000466905 CASZ1Q86V15 1759 aa11.79□□□□□ -0.52
SSR2-203ENST00000466905 CHL1O00533 1208 aa11.79□□□□□ -0.52
SSR2-203ENST00000466905 WWC1Q8IX03 1113 aa11.79□□□□□ -0.52
SSR2-203ENST00000466905 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
SSR2-203ENST00000466905 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
SSR2-203ENST00000466905 POLD1P28340 1107 aa11.78□□□□□ -0.52
SSR2-203ENST00000466905 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
SSR2-203ENST00000466905 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
SSR2-203ENST00000466905 UBR3Q6ZT12 1888 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 A0A087WZG4 1122 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 RFC4P35249 363 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 MSL1Q68DK7 614 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 AMIGO3Q86WK7 504 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 WDR63Q8IWG1 891 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 SOS1Q07889 1333 aaPredicted RBP11.77□□□□□ -0.53
SSR2-203ENST00000466905 IL16Q14005 1332 aa11.77□□□□□ -0.53
SSR2-203ENST00000466905 TUBGCP6Q96RT7 1819 aa11.76□□□□□ -0.53
SSR2-203ENST00000466905 SENP3-EIF4A1A0A087X0R7 540 aa11.76□□□□□ -0.53
SSR2-203ENST00000466905 ZNF853P0CG23 659 aa11.76□□□□□ -0.53
SSR2-203ENST00000466905 CANXP27824 592 aaKnown RBP11.76□□□□□ -0.53
SSR2-203ENST00000466905 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
SSR2-203ENST00000466905 USP16Q9Y5T5 823 aa11.76□□□□□ -0.53
SSR2-203ENST00000466905 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
SSR2-203ENST00000466905 ZPR1O75312 459 aa11.75□□□□□ -0.53
SSR2-203ENST00000466905 HOXB7P09629 217 aa11.75□□□□□ -0.53
SSR2-203ENST00000466905 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
SSR2-203ENST00000466905 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
SSR2-203ENST00000466905 CHMP4AQ9BY43 222 aa11.75□□□□□ -0.53
SSR2-203ENST00000466905 ZNF330Q9Y3S2 320 aaPredicted RBP11.75□□□□□ -0.53
SSR2-203ENST00000466905 COL15A1P39059 1388 aa11.75□□□□□ -0.53
SSR2-203ENST00000466905 GOLGB1Q14789 3259 aaKnown RBP11.74□□□□□ -0.53
SSR2-203ENST00000466905 PRAMEF22A3QJZ6 481 aa11.74□□□□□ -0.53
SSR2-203ENST00000466905 A1BGP04217 495 aa11.74□□□□□ -0.53
SSR2-203ENST00000466905 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
SSR2-203ENST00000466905 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
SSR2-203ENST00000466905 LAMB4A4D0S4 1761 aa11.74□□□□□ -0.53
SSR2-203ENST00000466905 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
SSR2-203ENST00000466905 YY1P25490 414 aa11.73□□□□□ -0.53
SSR2-203ENST00000466905 NLGN1Q8N2Q7 840 aa11.73□□□□□ -0.53
SSR2-203ENST00000466905 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
SSR2-203ENST00000466905 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
SSR2-203ENST00000466905 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
SSR2-203ENST00000466905 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
SSR2-203ENST00000466905 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
SSR2-203ENST00000466905 GPR162Q16538 588 aa11.71□□□□□ -0.53
SSR2-203ENST00000466905 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
SSR2-203ENST00000466905 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
SSR2-203ENST00000466905 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
SSR2-203ENST00000466905 ZNF521Q96K83 1311 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 GYS1P13807 737 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 PIP4K2AP48426 406 aaPredicted RBP11.7□□□□□ -0.54
SSR2-203ENST00000466905 KRT24Q2M2I5 525 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 NBPF10Q6P3W6 841 aaKnown RBP11.7□□□□□ -0.54
SSR2-203ENST00000466905 DZIP3Q86Y13 1208 aaKnown RBP11.7□□□□□ -0.54
SSR2-203ENST00000466905 NBPF15Q8N660 670 aa11.7□□□□□ -0.54
SSR2-203ENST00000466905 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
SSR2-203ENST00000466905 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
SSR2-203ENST00000466905 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
SSR2-203ENST00000466905 E9PSI1 815 aa11.69□□□□□ -0.54
SSR2-203ENST00000466905 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
SSR2-203ENST00000466905 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
SSR2-203ENST00000466905 TBC1D2BQ9UPU7 963 aa11.69□□□□□ -0.54
SSR2-203ENST00000466905 ZNF652Q9Y2D9 606 aa11.69□□□□□ -0.54
SSR2-203ENST00000466905 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
SSR2-203ENST00000466905 RGL2O15211 777 aa11.68□□□□□ -0.54
SSR2-203ENST00000466905 MMP10P09238 476 aa11.68□□□□□ -0.54
SSR2-203ENST00000466905 MYL6BP14649 208 aa11.68□□□□□ -0.54
SSR2-203ENST00000466905 TWISTNBQ3B726 338 aaPredicted RBP11.68□□□□□ -0.54
SSR2-203ENST00000466905 CCDC30Q5VVM6 783 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 334.8 ms