RNA–Protein interactions for RNA: ENST00000466441.5

UBP1-207, Transcript of upstream binding protein 1, humanhuman

TSL 1 (best)

Gene UBP1, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-207ENST00000466441 ITPKCQ96DU7 683 aa7.53□□□□□ -1.2
UBP1-207ENST00000466441 ESYT1Q9BSJ8 1104 aa7.53□□□□□ -1.2
UBP1-207ENST00000466441 SERTAD1Q9UHV2 236 aa7.53□□□□□ -1.2
UBP1-207ENST00000466441 CHMP3Q9Y3E7 222 aa7.53□□□□□ -1.2
UBP1-207ENST00000466441 ATAD2Q6PL18 1390 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 A6NJY4 79 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 SMPD1P17405 629 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 CLN3Q13286 438 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 MTFR1Q15390 333 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 TNS4Q8IZW8 715 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 VTI1AQ96AJ9 217 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 ARHGEF10LQ9HCE6 1279 aa7.52□□□□□ -1.21
UBP1-207ENST00000466441 ERCC6L2Q5T890 1561 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 TNIKQ9UKE5 1360 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 A0A1W2PRU2 124 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 CDK2AP1O14519 115 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 TIMP2P16035 220 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
UBP1-207ENST00000466441 CBLBQ13191 982 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 SND1Q7KZF4 910 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBP1-207ENST00000466441 STAG2Q8N3U4 1231 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 SCG3Q8WXD2 468 aaKnown RBP7.51□□□□□ -1.21
UBP1-207ENST00000466441 CEP162Q5TB80 1403 aa7.51□□□□□ -1.21
UBP1-207ENST00000466441 UPP2O95045 317 aa7.5□□□□□ -1.21
UBP1-207ENST00000466441 IL2RAP01589 272 aa7.5□□□□□ -1.21
UBP1-207ENST00000466441 EPHA4P54764 986 aa7.5□□□□□ -1.21
UBP1-207ENST00000466441 TRIM67Q6ZTA4 783 aa7.5□□□□□ -1.21
UBP1-207ENST00000466441 CHMP7Q8WUX9 453 aaPredicted RBP7.5□□□□□ -1.21
UBP1-207ENST00000466441 TSEN34Q9BSV6 310 aaKnown RBP7.5□□□□□ -1.21
UBP1-207ENST00000466441 ZFAND3Q9H8U3 227 aa7.5□□□□□ -1.21
UBP1-207ENST00000466441 SCHIP1Q9P0W5 487 aaPredicted RBP7.5□□□□□ -1.21
UBP1-207ENST00000466441 EGFL7Q9UHF1 273 aa7.5□□□□□ -1.21
UBP1-207ENST00000466441 ARAP1Q96P48 1450 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 GPC1P35052 558 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 PSMA6P60900 246 aaKnown RBP7.49□□□□□ -1.21
UBP1-207ENST00000466441 TLR1Q15399 786 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 MEIOBQ8N635 442 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 RAB6BQ9NRW1 208 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 NUP160Q12769 1436 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 IQGAP2Q13576 1575 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 ARHGAP35Q9NRY4 1499 aa7.49□□□□□ -1.21
UBP1-207ENST00000466441 CLASP1Q7Z460 1538 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 MEN1O00255 615 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 PPP1R12BO60237 982 aaPredicted RBP7.48□□□□□ -1.21
UBP1-207ENST00000466441 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
UBP1-207ENST00000466441 FOXK2Q01167 660 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 RELBQ01201 579 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 CCDC27Q2M243 656 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 SAMD9Q5K651 1589 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 KDF1Q8NAX2 398 aaPredicted RBP7.48□□□□□ -1.21
UBP1-207ENST00000466441 TSPAN10Q9H1Z9 355 aaPredicted RBP7.48□□□□□ -1.21
UBP1-207ENST00000466441 PDZRN3Q9UPQ7 1066 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 HRH3Q9Y5N1 445 aa7.48□□□□□ -1.21
UBP1-207ENST00000466441 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
UBP1-207ENST00000466441 CAPN5O15484 640 aaPredicted RBP7.47□□□□□ -1.21
UBP1-207ENST00000466441 MFAP1P55081 439 aaKnown RBP7.47□□□□□ -1.21
UBP1-207ENST00000466441 CENPCQ03188 943 aa7.47□□□□□ -1.21
UBP1-207ENST00000466441 FKBP5Q13451 457 aaPredicted RBP7.47□□□□□ -1.21
UBP1-207ENST00000466441 HPS1Q92902 700 aa7.47□□□□□ -1.21
UBP1-207ENST00000466441 ZSCAN10Q96SZ4 725 aaPredicted RBP7.47□□□□□ -1.21
UBP1-207ENST00000466441 CLIP1P30622 1438 aa7.46□□□□□ -1.21
UBP1-207ENST00000466441 FHOD3Q2V2M9 1422 aa7.46□□□□□ -1.21
UBP1-207ENST00000466441 SHROOM2Q13796 1616 aa7.46□□□□□ -1.21
UBP1-207ENST00000466441 SOWAHDA6NJG2 315 aa7.46□□□□□ -1.22
UBP1-207ENST00000466441 LGR5O75473 907 aa7.46□□□□□ -1.22
UBP1-207ENST00000466441 SF3B2Q13435 895 aaKnown RBP7.46□□□□□ -1.22
UBP1-207ENST00000466441 PPARGC1BQ86YN6 1023 aaKnown RBP7.46□□□□□ -1.22
UBP1-207ENST00000466441 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
UBP1-207ENST00000466441 C21orf2O43822 256 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 ABL1P00519 1130 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 SERPINB4P48594 390 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 TEAD4Q15561 434 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
UBP1-207ENST00000466441 MKNK1Q9BUB5 465 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 C2orf49Q9BVC5 232 aaPredicted RBP7.45□□□□□ -1.22
UBP1-207ENST00000466441 NIFKQ9BYG3 293 aaKnown RBP7.45□□□□□ -1.22
UBP1-207ENST00000466441 ZNF395Q9H8N7 513 aaPredicted RBP7.45□□□□□ -1.22
UBP1-207ENST00000466441 DISP1Q96F81 1524 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 KIAA0586Q9BVV6 1533 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 TTBK1Q5TCY1 1321 aaPredicted RBP7.45□□□□□ -1.22
UBP1-207ENST00000466441 KIAA0556O60303 1618 aa7.45□□□□□ -1.22
UBP1-207ENST00000466441 UGGT2Q9NYU1 1516 aa7.44□□□□□ -1.22
UBP1-207ENST00000466441 SERTM1A2A2V5 107 aa7.44□□□□□ -1.22
UBP1-207ENST00000466441 SPINT1O43278 529 aa7.44□□□□□ -1.22
UBP1-207ENST00000466441 RNF144AP50876 292 aaPredicted RBP7.44□□□□□ -1.22
UBP1-207ENST00000466441 FKBP4Q02790 459 aaKnown RBP eCLIP7.44□□□□□ -1.22
UBP1-207ENST00000466441 GNASQ5JWF2 1037 aa7.44□□□□□ -1.22
UBP1-207ENST00000466441 SLC27A3Q5K4L6 730 aa7.44□□□□□ -1.22
UBP1-207ENST00000466441 GTF3C2Q8WUA4 911 aaPredicted RBP7.44□□□□□ -1.22
UBP1-207ENST00000466441 FHDC1Q9C0D6 1143 aaPredicted RBP7.44□□□□□ -1.22
UBP1-207ENST00000466441 IQSEC3Q9UPP2 1182 aaPredicted RBP7.44□□□□□ -1.22
UBP1-207ENST00000466441 ICMTO60725 284 aa7.43□□□□□ -1.22
UBP1-207ENST00000466441 AVPP01185 164 aa7.43□□□□□ -1.22
UBP1-207ENST00000466441 NOS2P35228 1153 aa7.43□□□□□ -1.22
UBP1-207ENST00000466441 HIRAP54198 1017 aaPredicted RBP7.43□□□□□ -1.22
UBP1-207ENST00000466441 CTC1Q2NKJ3 1217 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms