RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
RBBP4-209ENST00000465780 GNPATO15228 680 aa14□□□□□ -0.17
RBBP4-209ENST00000465780 RPS6KA4O75676 772 aa14□□□□□ -0.17
RBBP4-209ENST00000465780 COL23A1Q86Y22 540 aaPredicted RBP14□□□□□ -0.17
RBBP4-209ENST00000465780 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
RBBP4-209ENST00000465780 ZNF496Q96IT1 587 aaPredicted RBP14□□□□□ -0.17
RBBP4-209ENST00000465780 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
RBBP4-209ENST00000465780 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
RBBP4-209ENST00000465780 KDM3BQ7LBC6 1761 aa14□□□□□ -0.17
RBBP4-209ENST00000465780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.99□□□□□ -0.17
RBBP4-209ENST00000465780 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
RBBP4-209ENST00000465780 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
RBBP4-209ENST00000465780 CRKLP46109 303 aaKnown RBP13.99□□□□□ -0.17
RBBP4-209ENST00000465780 STARD3NLO95772 234 aa13.98□□□□□ -0.17
RBBP4-209ENST00000465780 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
RBBP4-209ENST00000465780 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
RBBP4-209ENST00000465780 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
RBBP4-209ENST00000465780 APAF1O14727 1248 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 KCNQ3O43525 872 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 PTGER2P43116 358 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 TRAPPC3LQ5T215 181 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
RBBP4-209ENST00000465780 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
RBBP4-209ENST00000465780 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
RBBP4-209ENST00000465780 PHF14O94880 888 aa13.96□□□□□ -0.17
RBBP4-209ENST00000465780 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
RBBP4-209ENST00000465780 CAPN15O75808 1086 aa13.95□□□□□ -0.18
RBBP4-209ENST00000465780 CALD1Q05682 793 aaKnown RBP13.95□□□□□ -0.18
RBBP4-209ENST00000465780 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
RBBP4-209ENST00000465780 SOS1Q07889 1333 aaPredicted RBP13.94□□□□□ -0.18
RBBP4-209ENST00000465780 LAMB4A4D0S4 1761 aa13.94□□□□□ -0.18
RBBP4-209ENST00000465780 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
RBBP4-209ENST00000465780 POLD1P28340 1107 aa13.94□□□□□ -0.18
RBBP4-209ENST00000465780 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
RBBP4-209ENST00000465780 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
RBBP4-209ENST00000465780 ARHGEF1Q92888 912 aaKnown RBP13.94□□□□□ -0.18
RBBP4-209ENST00000465780 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
RBBP4-209ENST00000465780 PPP1R1BQ9UD71 204 aaPredicted RBP13.94□□□□□ -0.18
RBBP4-209ENST00000465780 TSPYL4Q9UJ04 414 aa13.94□□□□□ -0.18
RBBP4-209ENST00000465780 CHL1O00533 1208 aa13.93□□□□□ -0.18
RBBP4-209ENST00000465780 RFC4P35249 363 aa13.93□□□□□ -0.18
RBBP4-209ENST00000465780 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
RBBP4-209ENST00000465780 GIGYF1O75420 1035 aaPredicted RBP13.92□□□□□ -0.18
RBBP4-209ENST00000465780 EIF5P55010 431 aaKnown RBP13.92□□□□□ -0.18
RBBP4-209ENST00000465780 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
RBBP4-209ENST00000465780 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
RBBP4-209ENST00000465780 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
RBBP4-209ENST00000465780 ARXQ96QS3 562 aa13.92□□□□□ -0.18
RBBP4-209ENST00000465780 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
RBBP4-209ENST00000465780 A0A087WZG4 1122 aa13.91□□□□□ -0.18
RBBP4-209ENST00000465780 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
RBBP4-209ENST00000465780 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
RBBP4-209ENST00000465780 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
RBBP4-209ENST00000465780 COL15A1P39059 1388 aa13.91□□□□□ -0.18
RBBP4-209ENST00000465780 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
RBBP4-209ENST00000465780 ZNF853P0CG23 659 aa13.9□□□□□ -0.18
RBBP4-209ENST00000465780 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
RBBP4-209ENST00000465780 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
RBBP4-209ENST00000465780 IFT57Q9NWB7 429 aa13.9□□□□□ -0.18
RBBP4-209ENST00000465780 PRAMEF22A3QJZ6 481 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 ZPR1O75312 459 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 A1BGP04217 495 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 GYS1P13807 737 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 GNAI1P63096 354 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 MSL1Q68DK7 614 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 ERBB4Q15303 1308 aa13.89□□□□□ -0.19
RBBP4-209ENST00000465780 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
RBBP4-209ENST00000465780 WWC1Q8IX03 1113 aa13.88□□□□□ -0.19
RBBP4-209ENST00000465780 IL16Q14005 1332 aa13.88□□□□□ -0.19
RBBP4-209ENST00000465780 HOXB7P09629 217 aa13.87□□□□□ -0.19
RBBP4-209ENST00000465780 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
RBBP4-209ENST00000465780 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
RBBP4-209ENST00000465780 RGL2O15211 777 aa13.86□□□□□ -0.19
RBBP4-209ENST00000465780 MMP10P09238 476 aa13.86□□□□□ -0.19
RBBP4-209ENST00000465780 MBIPQ9NS73 344 aa13.86□□□□□ -0.19
RBBP4-209ENST00000465780 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
RBBP4-209ENST00000465780 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
RBBP4-209ENST00000465780 ABCB7O75027 752 aa13.85□□□□□ -0.19
RBBP4-209ENST00000465780 USPL1Q5W0Q7 1092 aa13.85□□□□□ -0.19
RBBP4-209ENST00000465780 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
RBBP4-209ENST00000465780 WDR63Q8IWG1 891 aa13.85□□□□□ -0.19
RBBP4-209ENST00000465780 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
RBBP4-209ENST00000465780 FHDC1Q9C0D6 1143 aaPredicted RBP13.85□□□□□ -0.19
RBBP4-209ENST00000465780 BCORQ6W2J9 1755 aa13.85□□□□□ -0.19
RBBP4-209ENST00000465780 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
RBBP4-209ENST00000465780 CD2APQ9Y5K6 639 aa13.84□□□□□ -0.19
RBBP4-209ENST00000465780 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 CAMTA2O94983 1202 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 TM4SF1P30408 202 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
RBBP4-209ENST00000465780 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 ZNF330Q9Y3S2 320 aaPredicted RBP13.83□□□□□ -0.2
RBBP4-209ENST00000465780 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
RBBP4-209ENST00000465780 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
RBBP4-209ENST00000465780 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms