RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 PNISRQ8TF01 805 aaKnown RBP16.52■□□□□ 0.24
CNKSR1-203ENST00000465415 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
CNKSR1-203ENST00000465415 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
CNKSR1-203ENST00000465415 KDM3BQ7LBC6 1761 aa16.51■□□□□ 0.23
CNKSR1-203ENST00000465415 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
CNKSR1-203ENST00000465415 FHDC1Q9C0D6 1143 aaPredicted RBP16.51■□□□□ 0.23
CNKSR1-203ENST00000465415 ZBTB1Q9Y2K1 713 aa16.51■□□□□ 0.23
CNKSR1-203ENST00000465415 COL15A1P39059 1388 aa16.51■□□□□ 0.23
CNKSR1-203ENST00000465415 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
CNKSR1-203ENST00000465415 KLHL34Q8N239 644 aa16.49■□□□□ 0.23
CNKSR1-203ENST00000465415 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
CNKSR1-203ENST00000465415 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
CNKSR1-203ENST00000465415 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
CNKSR1-203ENST00000465415 IFFO2Q5TF58 517 aa16.48■□□□□ 0.23
CNKSR1-203ENST00000465415 APAF1O14727 1248 aa16.47■□□□□ 0.23
CNKSR1-203ENST00000465415 GYS1P13807 737 aa16.47■□□□□ 0.23
CNKSR1-203ENST00000465415 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
CNKSR1-203ENST00000465415 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
CNKSR1-203ENST00000465415 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
CNKSR1-203ENST00000465415 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
CNKSR1-203ENST00000465415 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
CNKSR1-203ENST00000465415 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
CNKSR1-203ENST00000465415 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
CNKSR1-203ENST00000465415 ZPR1O75312 459 aa16.45■□□□□ 0.22
CNKSR1-203ENST00000465415 MMP10P09238 476 aa16.45■□□□□ 0.22
CNKSR1-203ENST00000465415 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
CNKSR1-203ENST00000465415 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
CNKSR1-203ENST00000465415 ZNF330Q9Y3S2 320 aaPredicted RBP16.45■□□□□ 0.22
CNKSR1-203ENST00000465415 USP16Q9Y5T5 823 aa16.45■□□□□ 0.22
CNKSR1-203ENST00000465415 A1BGP04217 495 aa16.44■□□□□ 0.22
CNKSR1-203ENST00000465415 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
CNKSR1-203ENST00000465415 EIF5P55010 431 aaKnown RBP16.44■□□□□ 0.22
CNKSR1-203ENST00000465415 A0A087WZG4 1122 aa16.43■□□□□ 0.22
CNKSR1-203ENST00000465415 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
CNKSR1-203ENST00000465415 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
CNKSR1-203ENST00000465415 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
CNKSR1-203ENST00000465415 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
CNKSR1-203ENST00000465415 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-203ENST00000465415 FKBP8Q14318 412 aa16.42■□□□□ 0.22
CNKSR1-203ENST00000465415 LAS1LQ9Y4W2 734 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-203ENST00000465415 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
CNKSR1-203ENST00000465415 PIP4K2AP48426 406 aaPredicted RBP16.41■□□□□ 0.22
CNKSR1-203ENST00000465415 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
CNKSR1-203ENST00000465415 CHL1O00533 1208 aa16.4■□□□□ 0.22
CNKSR1-203ENST00000465415 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-203ENST00000465415 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
CNKSR1-203ENST00000465415 PARP3Q9Y6F1 533 aa16.4■□□□□ 0.22
CNKSR1-203ENST00000465415 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
CNKSR1-203ENST00000465415 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 DDR1Q08345 913 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 DZIP3Q86Y13 1208 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 FAM9BQ8IZU0 186 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
CNKSR1-203ENST00000465415 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
CNKSR1-203ENST00000465415 IFT57Q9NWB7 429 aa16.37■□□□□ 0.21
CNKSR1-203ENST00000465415 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
CNKSR1-203ENST00000465415 CAMTA2O94983 1202 aa16.36■□□□□ 0.21
CNKSR1-203ENST00000465415 TM4SF1P30408 202 aa16.36■□□□□ 0.21
CNKSR1-203ENST00000465415 NFIXQ14938 502 aa16.36■□□□□ 0.21
CNKSR1-203ENST00000465415 CCDC27Q2M243 656 aa16.36■□□□□ 0.21
CNKSR1-203ENST00000465415 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
CNKSR1-203ENST00000465415 GNAI1P63096 354 aa16.35■□□□□ 0.21
CNKSR1-203ENST00000465415 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
CNKSR1-203ENST00000465415 MBIPQ9NS73 344 aa16.35■□□□□ 0.21
CNKSR1-203ENST00000465415 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
CNKSR1-203ENST00000465415 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
CNKSR1-203ENST00000465415 MYL6BP14649 208 aa16.34■□□□□ 0.21
CNKSR1-203ENST00000465415 EIF2S2P20042 333 aaKnown RBP16.34■□□□□ 0.21
CNKSR1-203ENST00000465415 BICDL1Q6ZP65 573 aa16.34■□□□□ 0.21
CNKSR1-203ENST00000465415 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
CNKSR1-203ENST00000465415 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
CNKSR1-203ENST00000465415 GPR162Q16538 588 aa16.33■□□□□ 0.2
CNKSR1-203ENST00000465415 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-203ENST00000465415 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.2
CNKSR1-203ENST00000465415 WWC1Q8IX03 1113 aa16.33■□□□□ 0.2
CNKSR1-203ENST00000465415 ZNF652Q9Y2D9 606 aa16.33■□□□□ 0.2
CNKSR1-203ENST00000465415 CARMIL3Q8ND23 1372 aa16.33■□□□□ 0.2
CNKSR1-203ENST00000465415 HOXB7P09629 217 aa16.32■□□□□ 0.2
CNKSR1-203ENST00000465415 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
CNKSR1-203ENST00000465415 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
CNKSR1-203ENST00000465415 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 RGL2O15211 777 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 SERPINB2P05120 415 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 TGFB2P61812 414 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 KIF6Q6ZMV9 814 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 SALL2Q9Y467 1007 aaPredicted RBP16.31■□□□□ 0.2
CNKSR1-203ENST00000465415 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
CNKSR1-203ENST00000465415 YY1P25490 414 aa16.3■□□□□ 0.2
CNKSR1-203ENST00000465415 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
CNKSR1-203ENST00000465415 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
CNKSR1-203ENST00000465415 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
CNKSR1-203ENST00000465415 IL16Q14005 1332 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms