RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
LST1-220ENST00000464526 TCERG1O14776 1098 aaKnown RBP22.75■■□□□ 1.23
LST1-220ENST00000464526 MYH16Q9H6N6 1097 aa22.75■■□□□ 1.23
LST1-220ENST00000464526 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
LST1-220ENST00000464526 A1BGP04217 495 aa22.74■■□□□ 1.23
LST1-220ENST00000464526 SNRPA1P09661 255 aaKnown RBP22.74■■□□□ 1.23
LST1-220ENST00000464526 ANXA1P04083 346 aa22.73■■□□□ 1.23
LST1-220ENST00000464526 SLC27A3Q5K4L6 730 aa22.73■■□□□ 1.23
LST1-220ENST00000464526 VSIG10Q8N0Z9 540 aa22.73■■□□□ 1.23
LST1-220ENST00000464526 ZBTB1Q9Y2K1 713 aa22.73■■□□□ 1.23
LST1-220ENST00000464526 SRCAPQ6ZRS2 3230 aa22.73■■□□□ 1.23
LST1-220ENST00000464526 EIF2S2P20042 333 aaKnown RBP22.73■■□□□ 1.23
LST1-220ENST00000464526 PROSER3Q2NL68 480 aa22.73■■□□□ 1.23
LST1-220ENST00000464526 SOCS7O14512 581 aa22.72■■□□□ 1.23
LST1-220ENST00000464526 CRKLP46109 303 aaKnown RBP22.72■■□□□ 1.23
LST1-220ENST00000464526 TWISTNBQ3B726 338 aaPredicted RBP22.72■■□□□ 1.23
LST1-220ENST00000464526 INTS5Q6P9B9 1019 aaKnown RBP22.72■■□□□ 1.23
LST1-220ENST00000464526 UBR3Q6ZT12 1888 aa22.72■■□□□ 1.23
LST1-220ENST00000464526 NBPF26B4DH59 902 aa22.71■■□□□ 1.23
LST1-220ENST00000464526 NBPF14Q5TI25 921 aa22.71■■□□□ 1.23
LST1-220ENST00000464526 NBPF10Q6P3W6 841 aaKnown RBP22.71■■□□□ 1.23
LST1-220ENST00000464526 NBPF15Q8N660 670 aa22.71■■□□□ 1.23
LST1-220ENST00000464526 VAMP4O75379 141 aa22.69■■□□□ 1.22
LST1-220ENST00000464526 AKT1S1Q96B36 256 aa22.69■■□□□ 1.22
LST1-220ENST00000464526 PDIA6Q15084 440 aa22.68■■□□□ 1.22
LST1-220ENST00000464526 HDGFL1Q5TGJ6 251 aa22.68■■□□□ 1.22
LST1-220ENST00000464526 PDGFDQ9GZP0 370 aaPredicted RBP22.68■■□□□ 1.22
LST1-220ENST00000464526 CHPF2Q9P2E5 772 aa22.68■■□□□ 1.22
LST1-220ENST00000464526 GNPATO15228 680 aa22.67■■□□□ 1.22
LST1-220ENST00000464526 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
LST1-220ENST00000464526 CNTNAP4Q9C0A0 1308 aa22.67■■□□□ 1.22
LST1-220ENST00000464526 C4AP0C0L4 1744 aa22.66■■□□□ 1.22
LST1-220ENST00000464526 LRP10Q7Z4F1 713 aa22.66■■□□□ 1.22
LST1-220ENST00000464526 CCDC87Q9NVE4 849 aa22.66■■□□□ 1.22
LST1-220ENST00000464526 PHF14O94880 888 aa22.66■■□□□ 1.22
LST1-220ENST00000464526 BCL2L13Q9BXK5 485 aa22.66■■□□□ 1.22
LST1-220ENST00000464526 MYL6BP14649 208 aa22.65■■□□□ 1.22
LST1-220ENST00000464526 STARD3NLO95772 234 aa22.64■■□□□ 1.22
LST1-220ENST00000464526 ZNF330Q9Y3S2 320 aaPredicted RBP22.64■■□□□ 1.22
LST1-220ENST00000464526 AK7Q96M32 723 aa22.64■■□□□ 1.21
LST1-220ENST00000464526 HOXB7P09629 217 aa22.63■■□□□ 1.21
LST1-220ENST00000464526 SOS1Q07889 1333 aaPredicted RBP22.63■■□□□ 1.21
LST1-220ENST00000464526 SLC15A2Q16348 729 aa22.62■■□□□ 1.21
LST1-220ENST00000464526 PNPLA7Q6ZV29 1317 aa22.62■■□□□ 1.21
LST1-220ENST00000464526 G2E3Q7L622 706 aa22.61■■□□□ 1.21
LST1-220ENST00000464526 TEX13AQ9BXU3 409 aaPredicted RBP22.61■■□□□ 1.21
LST1-220ENST00000464526 PSDA5PKW4 1024 aaPredicted RBP22.61■■□□□ 1.21
LST1-220ENST00000464526 PHAXQ9H814 394 aaKnown RBP22.61■■□□□ 1.21
LST1-220ENST00000464526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.6■■□□□ 1.21
LST1-220ENST00000464526 RC3H1Q5TC82 1133 aaKnown RBP22.6■■□□□ 1.21
LST1-220ENST00000464526 SSH1Q8WYL5 1049 aa22.6■■□□□ 1.21
LST1-220ENST00000464526 COL15A1P39059 1388 aa22.6■■□□□ 1.21
LST1-220ENST00000464526 EIF5P55010 431 aaKnown RBP22.59■■□□□ 1.21
LST1-220ENST00000464526 R3HDM1Q15032 1099 aaKnown RBP22.59■■□□□ 1.21
LST1-220ENST00000464526 TFCP2L1Q9NZI6 479 aa22.59■■□□□ 1.21
LST1-220ENST00000464526 TTLL7Q6ZT98 887 aa22.59■■□□□ 1.21
LST1-220ENST00000464526 QSER1Q2KHR3 1735 aa22.58■■□□□ 1.21
LST1-220ENST00000464526 RPS6KA4O75676 772 aa22.58■■□□□ 1.21
LST1-220ENST00000464526 COL23A1Q86Y22 540 aaPredicted RBP22.58■■□□□ 1.21
LST1-220ENST00000464526 STK32BQ9NY57 414 aa22.58■■□□□ 1.21
LST1-220ENST00000464526 SRP68Q9UHB9 627 aaKnown RBP22.58■■□□□ 1.21
LST1-220ENST00000464526 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
LST1-220ENST00000464526 CASZ1Q86V15 1759 aa22.57■■□□□ 1.2
LST1-220ENST00000464526 ARHGEF1Q92888 912 aaKnown RBP22.57■■□□□ 1.2
LST1-220ENST00000464526 RTCBQ9Y3I0 505 aaKnown RBP22.57■■□□□ 1.2
LST1-220ENST00000464526 BCAR3O75815 825 aa22.56■■□□□ 1.2
LST1-220ENST00000464526 RARSP54136 660 aaKnown RBP22.56■■□□□ 1.2
LST1-220ENST00000464526 CCDC30Q5VVM6 783 aa22.56■■□□□ 1.2
LST1-220ENST00000464526 TBC1D2BQ9UPU7 963 aa22.56■■□□□ 1.2
LST1-220ENST00000464526 SCN7AQ01118 1682 aa22.55■■□□□ 1.2
LST1-220ENST00000464526 BCORQ6W2J9 1755 aa22.55■■□□□ 1.2
LST1-220ENST00000464526 SLC4A2P04920 1241 aa22.55■■□□□ 1.2
LST1-220ENST00000464526 IL6STP40189 918 aaPredicted RBP22.55■■□□□ 1.2
LST1-220ENST00000464526 AIMP1Q12904 312 aaKnown RBP22.55■■□□□ 1.2
LST1-220ENST00000464526 XAGE3Q8WTP9 111 aa22.55■■□□□ 1.2
LST1-220ENST00000464526 DBF4Q9UBU7 674 aaPredicted RBP22.55■■□□□ 1.2
LST1-220ENST00000464526 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
LST1-220ENST00000464526 MRPL50Q8N5N7 158 aaKnown RBP22.54■■□□□ 1.2
LST1-220ENST00000464526 COPS6Q7L5N1 327 aa22.53■■□□□ 1.2
LST1-220ENST00000464526 SSFA2P28290 1259 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 ARXQ96QS3 562 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 BCL2L12Q9HB09 334 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 SMC4Q9NTJ3 1288 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 TNNQ9UQP3 1299 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 ZNF428Q96B54 188 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 ZBTB3Q9H5J0 574 aa22.52■■□□□ 1.2
LST1-220ENST00000464526 ARFGEF2Q9Y6D5 1785 aa22.51■■□□□ 1.19
LST1-220ENST00000464526 DZIP3Q86Y13 1208 aaKnown RBP22.51■■□□□ 1.19
LST1-220ENST00000464526 STK31Q9BXU1 1019 aa22.51■■□□□ 1.19
LST1-220ENST00000464526 CAMTA2O94983 1202 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 HLFQ16534 295 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 MSL1Q68DK7 614 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 USP42Q9H9J4 1324 aaKnown RBP22.5■■□□□ 1.19
LST1-220ENST00000464526 MSH5O43196 834 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 FLIIQ13045 1269 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 TRAPPC3LQ5T215 181 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 USPL1Q5W0Q7 1092 aa22.5■■□□□ 1.19
LST1-220ENST00000464526 ADCY9O60503 1353 aa22.49■■□□□ 1.19
LST1-220ENST00000464526 CT47B1P0C2W7 299 aaPredicted RBP22.48■■□□□ 1.19
LST1-220ENST00000464526 HYPKQ9NX55 129 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms