RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 DEFB132Q7Z7B7 95 aa17.9■□□□□ 0.46
PHACTR4-203ENST00000463428 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
PHACTR4-203ENST00000463428 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.46
PHACTR4-203ENST00000463428 HDGFL1Q5TGJ6 251 aa17.89■□□□□ 0.46
PHACTR4-203ENST00000463428 ZNF428Q96B54 188 aa17.89■□□□□ 0.46
PHACTR4-203ENST00000463428 CACNA1FO60840 1977 aa17.89■□□□□ 0.46
PHACTR4-203ENST00000463428 RREB1Q92766 1687 aa17.89■□□□□ 0.45
PHACTR4-203ENST00000463428 PDIA6Q15084 440 aa17.89■□□□□ 0.45
PHACTR4-203ENST00000463428 STARD3NLO95772 234 aa17.88■□□□□ 0.45
PHACTR4-203ENST00000463428 A1BGP04217 495 aa17.88■□□□□ 0.45
PHACTR4-203ENST00000463428 RARSP54136 660 aaKnown RBP17.88■□□□□ 0.45
PHACTR4-203ENST00000463428 CCDC30Q5VVM6 783 aa17.88■□□□□ 0.45
PHACTR4-203ENST00000463428 INTS5Q6P9B9 1019 aaKnown RBP17.88■□□□□ 0.45
PHACTR4-203ENST00000463428 NECTIN2Q92692 538 aa17.88■□□□□ 0.45
PHACTR4-203ENST00000463428 NBPF26B4DH59 902 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 NBPF14Q5TI25 921 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 NBPF10Q6P3W6 841 aaKnown RBP17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 NBPF15Q8N660 670 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 SSH1Q8WYL5 1049 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
PHACTR4-203ENST00000463428 C4BP0C0L5 1744 aa17.86■□□□□ 0.45
PHACTR4-203ENST00000463428 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
PHACTR4-203ENST00000463428 CRKLP46109 303 aaKnown RBP17.86■□□□□ 0.45
PHACTR4-203ENST00000463428 ALDH1L2Q3SY69 923 aa17.86■□□□□ 0.45
PHACTR4-203ENST00000463428 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
PHACTR4-203ENST00000463428 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
PHACTR4-203ENST00000463428 PROSER3Q2NL68 480 aa17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 CCDC87Q9NVE4 849 aa17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 CHPF2Q9P2E5 772 aa17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 ZBTB1Q9Y2K1 713 aa17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
PHACTR4-203ENST00000463428 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
PHACTR4-203ENST00000463428 DBF4Q9UBU7 674 aaPredicted RBP17.84■□□□□ 0.45
PHACTR4-203ENST00000463428 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
PHACTR4-203ENST00000463428 ANXA1P04083 346 aa17.83■□□□□ 0.45
PHACTR4-203ENST00000463428 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.45
PHACTR4-203ENST00000463428 BCAR3O75815 825 aa17.82■□□□□ 0.44
PHACTR4-203ENST00000463428 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
PHACTR4-203ENST00000463428 HMGB2P26583 209 aaKnown RBP17.82■□□□□ 0.44
PHACTR4-203ENST00000463428 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
PHACTR4-203ENST00000463428 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
PHACTR4-203ENST00000463428 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
PHACTR4-203ENST00000463428 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 IL6STP40189 918 aaPredicted RBP17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 G2E3Q7L622 706 aa17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 MYL6BP14649 208 aa17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 AMIGO3Q86WK7 504 aa17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 PHAXQ9H814 394 aaKnown RBP17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
PHACTR4-203ENST00000463428 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
PHACTR4-203ENST00000463428 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
PHACTR4-203ENST00000463428 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
PHACTR4-203ENST00000463428 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
PHACTR4-203ENST00000463428 SMIM5Q71RC9 77 aa17.78■□□□□ 0.44
PHACTR4-203ENST00000463428 AK7Q96M32 723 aa17.78■□□□□ 0.44
PHACTR4-203ENST00000463428 GNPATO15228 680 aa17.77■□□□□ 0.44
PHACTR4-203ENST00000463428 FLIIQ13045 1269 aa17.77■□□□□ 0.44
PHACTR4-203ENST00000463428 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
PHACTR4-203ENST00000463428 XAGE3Q8WTP9 111 aa17.77■□□□□ 0.44
PHACTR4-203ENST00000463428 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.44
PHACTR4-203ENST00000463428 CENPBP07199 599 aaPredicted RBP17.76■□□□□ 0.43
PHACTR4-203ENST00000463428 SLC15A2Q16348 729 aa17.76■□□□□ 0.43
PHACTR4-203ENST00000463428 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
PHACTR4-203ENST00000463428 NOB1Q9ULX3 412 aaKnown RBP17.76■□□□□ 0.43
PHACTR4-203ENST00000463428 QSER1Q2KHR3 1735 aa17.75■□□□□ 0.43
PHACTR4-203ENST00000463428 COL15A1P39059 1388 aa17.75■□□□□ 0.43
PHACTR4-203ENST00000463428 SSFA2P28290 1259 aa17.74■□□□□ 0.43
PHACTR4-203ENST00000463428 AIMP1Q12904 312 aaKnown RBP17.74■□□□□ 0.43
PHACTR4-203ENST00000463428 ARHGEF1Q92888 912 aaKnown RBP17.74■□□□□ 0.43
PHACTR4-203ENST00000463428 C4AP0C0L4 1744 aa17.74■□□□□ 0.43
PHACTR4-203ENST00000463428 RNF123Q5XPI4 1314 aa17.74■□□□□ 0.43
PHACTR4-203ENST00000463428 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
PHACTR4-203ENST00000463428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 ADRA2BP18089 450 aa17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 ARHGAP45Q92619 1136 aa17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 STK32BQ9NY57 414 aa17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 ZNF330Q9Y3S2 320 aaPredicted RBP17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 PTPRCP08575 1304 aa17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 PNPLA7Q6ZV29 1317 aa17.73■□□□□ 0.43
PHACTR4-203ENST00000463428 TRAPPC3LQ5T215 181 aa17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 DZIP3Q86Y13 1208 aaKnown RBP17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 A0A087WZG4 1122 aa17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 ANKRD13DQ6ZTN6 518 aa17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 PLBD2Q8NHP8 589 aa17.72■□□□□ 0.43
PHACTR4-203ENST00000463428 ADCY9O60503 1353 aa17.71■□□□□ 0.43
PHACTR4-203ENST00000463428 MAP3K15Q6ZN16 1313 aa17.71■□□□□ 0.43
PHACTR4-203ENST00000463428 NUP98P52948 1817 aa17.71■□□□□ 0.43
PHACTR4-203ENST00000463428 PI4KAP2A4QPH2 592 aa17.71■□□□□ 0.43
PHACTR4-203ENST00000463428 PHF14O94880 888 aa17.71■□□□□ 0.43
PHACTR4-203ENST00000463428 CAMTA2O94983 1202 aa17.71■□□□□ 0.43
PHACTR4-203ENST00000463428 FKBP5Q13451 457 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms